RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 RASGEF1AQ8N9B8 481 aa14.58□□□□□ -0.08
UBE2D3-228ENST00000508974 FAM71DQ8N9W8 422 aa14.58□□□□□ -0.08
UBE2D3-228ENST00000508974 OR4K2Q8NGD2 314 aa14.58□□□□□ -0.08
UBE2D3-228ENST00000508974 TIMM29Q9BSF4 260 aa14.58□□□□□ -0.08
UBE2D3-228ENST00000508974 OCIAD1Q9NX40 245 aa14.58□□□□□ -0.08
UBE2D3-228ENST00000508974 FAM8A1Q9UBU6 413 aa14.58□□□□□ -0.08
UBE2D3-228ENST00000508974 FKBPLQ9UIM3 349 aa14.58□□□□□ -0.08
UBE2D3-228ENST00000508974 AAR2Q9Y312 384 aaKnown RBP14.58□□□□□ -0.08
UBE2D3-228ENST00000508974 ATMQ13315 3056 aa14.57□□□□□ -0.08
UBE2D3-228ENST00000508974 TEX51A0A1B0GUA7 166 aa14.57□□□□□ -0.08
UBE2D3-228ENST00000508974 OR52A4PA6NMU1 304 aa14.57□□□□□ -0.08
UBE2D3-228ENST00000508974 EFCAB7A8K855 629 aa14.57□□□□□ -0.08
UBE2D3-228ENST00000508974 MIF4GDA9UHW6 222 aaKnown RBP14.57□□□□□ -0.08
UBE2D3-228ENST00000508974 CCL22O00626 93 aa14.57□□□□□ -0.08
UBE2D3-228ENST00000508974 HGSO14964 777 aaPredicted RBP14.57□□□□□ -0.08
UBE2D3-228ENST00000508974 NVLO15381 856 aaKnown RBP14.57□□□□□ -0.08
UBE2D3-228ENST00000508974 PRAMEF1O95521 474 aa14.57□□□□□ -0.08
UBE2D3-228ENST00000508974 VIPP01282 170 aa14.57□□□□□ -0.08
UBE2D3-228ENST00000508974 TYRP1P17643 537 aa14.57□□□□□ -0.08
UBE2D3-228ENST00000508974 LPOP22079 712 aaPredicted RBP14.57□□□□□ -0.08
UBE2D3-228ENST00000508974 ADRA1AP35348 466 aa14.57□□□□□ -0.08
UBE2D3-228ENST00000508974 CTSCP53634 463 aa14.57□□□□□ -0.08
UBE2D3-228ENST00000508974 UBE2IP63279 158 aaKnown RBP14.57□□□□□ -0.08
UBE2D3-228ENST00000508974 ITGA9Q13797 1035 aa14.57□□□□□ -0.08
UBE2D3-228ENST00000508974 CLPPQ16740 277 aaPredicted RBP14.57□□□□□ -0.08
UBE2D3-228ENST00000508974 KIAA1614Q5VZ46 1190 aa14.57□□□□□ -0.08
UBE2D3-228ENST00000508974 ZDHHC20Q5W0Z9 365 aa14.57□□□□□ -0.08
UBE2D3-228ENST00000508974 RANBP10Q6VN20 620 aa14.57□□□□□ -0.08
UBE2D3-228ENST00000508974 C11orf96Q7Z7L8 435 aa14.57□□□□□ -0.08
UBE2D3-228ENST00000508974 AGBL5Q8NDL9 886 aa14.57□□□□□ -0.08
UBE2D3-228ENST00000508974 OR13C4Q8NGS5 318 aa14.57□□□□□ -0.08
UBE2D3-228ENST00000508974 ART4Q93070 314 aa14.57□□□□□ -0.08
UBE2D3-228ENST00000508974 SH3KBP1Q96B97 665 aa14.57□□□□□ -0.08
UBE2D3-228ENST00000508974 CCNL2Q96S94 520 aaPredicted RBP14.57□□□□□ -0.08
UBE2D3-228ENST00000508974 TBL1YQ9BQ87 522 aa14.57□□□□□ -0.08
UBE2D3-228ENST00000508974 ZNF624Q9P2J8 865 aaPredicted RBP14.57□□□□□ -0.08
UBE2D3-228ENST00000508974 GUCA1BQ9UMX6 200 aa14.57□□□□□ -0.08
UBE2D3-228ENST00000508974 PSMD13Q9UNM6 376 aa14.57□□□□□ -0.08
UBE2D3-228ENST00000508974 OR5K4A6NMS3 321 aa14.56□□□□□ -0.08
UBE2D3-228ENST00000508974 C2orf81A6NN90 581 aa14.56□□□□□ -0.08
UBE2D3-228ENST00000508974 LIPCP11150 499 aa14.56□□□□□ -0.08
UBE2D3-228ENST00000508974 BRAFP15056 766 aa14.56□□□□□ -0.08
UBE2D3-228ENST00000508974 VCLP18206 1134 aa14.56□□□□□ -0.08
UBE2D3-228ENST00000508974 IDSP22304 550 aa14.56□□□□□ -0.08
UBE2D3-228ENST00000508974 SLC19A1P41440 591 aa14.56□□□□□ -0.08
UBE2D3-228ENST00000508974 CLCNKAP51800 687 aa14.56□□□□□ -0.08
UBE2D3-228ENST00000508974 GDF10P55107 478 aa14.56□□□□□ -0.08
UBE2D3-228ENST00000508974 TRA2AQ13595 282 aaKnown RBP eCLIP14.56□□□□□ -0.08
UBE2D3-228ENST00000508974 TAF1AQ15573 450 aaPredicted RBP14.56□□□□□ -0.08
UBE2D3-228ENST00000508974 LDLRAP1Q5SW96 308 aa14.56□□□□□ -0.08
UBE2D3-228ENST00000508974 FNBP1LQ5T0N5 605 aa14.56□□□□□ -0.08
UBE2D3-228ENST00000508974 TMEM164Q5U3C3 297 aa14.56□□□□□ -0.08
UBE2D3-228ENST00000508974 TMEM220Q6QAJ8 160 aa14.56□□□□□ -0.08
UBE2D3-228ENST00000508974 BEND7Q8N7W2 519 aaPredicted RBP14.56□□□□□ -0.08
UBE2D3-228ENST00000508974 DDHD1Q8NEL9 900 aa14.56□□□□□ -0.08
UBE2D3-228ENST00000508974 ZNF398Q8TD17 642 aa14.56□□□□□ -0.08
UBE2D3-228ENST00000508974 BRSK1Q8TDC3 778 aa14.56□□□□□ -0.08
UBE2D3-228ENST00000508974 ATG4AQ8WYN0 398 aa14.56□□□□□ -0.08
UBE2D3-228ENST00000508974 CXorf40BQ96DE9 158 aa14.56□□□□□ -0.08
UBE2D3-228ENST00000508974 RNF31Q96EP0 1072 aa14.56□□□□□ -0.08
UBE2D3-228ENST00000508974 CTRCQ99895 268 aa14.56□□□□□ -0.08
UBE2D3-228ENST00000508974 TMEM121Q9BTD3 319 aa14.56□□□□□ -0.08
UBE2D3-228ENST00000508974 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.56□□□□□ -0.08
UBE2D3-228ENST00000508974 ZCCHC2Q9C0B9 1178 aaKnown RBP14.56□□□□□ -0.08
UBE2D3-228ENST00000508974 FAM96AQ9H5X1 160 aa14.56□□□□□ -0.08
UBE2D3-228ENST00000508974 ASB8Q9H765 288 aa14.56□□□□□ -0.08
UBE2D3-228ENST00000508974 PIH1D1Q9NWS0 290 aaKnown RBP14.56□□□□□ -0.08
UBE2D3-228ENST00000508974 SLC39A1Q9NY26 324 aa14.56□□□□□ -0.08
UBE2D3-228ENST00000508974 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.56□□□□□ -0.086e-8■■■□□ 14.9
UBE2D3-228ENST00000508974 WDR37Q9Y2I8 494 aa14.56□□□□□ -0.08
UBE2D3-228ENST00000508974 ATXN7O15265 892 aaPredicted RBP14.55□□□□□ -0.08
UBE2D3-228ENST00000508974 POP7O75817 140 aaKnown RBP14.55□□□□□ -0.08
UBE2D3-228ENST00000508974 METTL18O95568 372 aa14.55□□□□□ -0.08
UBE2D3-228ENST00000508974 XRCC1P18887 633 aaPredicted RBP14.55□□□□□ -0.08
UBE2D3-228ENST00000508974 MSH3P20585 1137 aa14.55□□□□□ -0.08
UBE2D3-228ENST00000508974 EPHA4P54764 986 aa14.55□□□□□ -0.08
UBE2D3-228ENST00000508974 GFERP55789 205 aa14.55□□□□□ -0.08
UBE2D3-228ENST00000508974 KLF1Q13351 362 aaPredicted RBP14.55□□□□□ -0.08
UBE2D3-228ENST00000508974 SQSTM1Q13501 440 aa14.55□□□□□ -0.08
UBE2D3-228ENST00000508974 SEPT6Q14141 434 aa14.55□□□□□ -0.08
UBE2D3-228ENST00000508974 CLCA4Q14CN2 919 aa14.55□□□□□ -0.08
UBE2D3-228ENST00000508974 TAF1BQ53T94 588 aaPredicted RBP14.55□□□□□ -0.08
UBE2D3-228ENST00000508974 WDR74Q6RFH5 385 aaPredicted RBP14.55□□□□□ -0.08
UBE2D3-228ENST00000508974 FAM83HQ6ZRV2 1179 aaPredicted RBP14.55□□□□□ -0.08
UBE2D3-228ENST00000508974 AMZ2Q86W34 360 aa14.55□□□□□ -0.08
UBE2D3-228ENST00000508974 TTC13Q8NBP0 860 aa14.55□□□□□ -0.08
UBE2D3-228ENST00000508974 CCDC112Q8NEF3 446 aa14.55□□□□□ -0.08
UBE2D3-228ENST00000508974 HES6Q96HZ4 224 aa14.55□□□□□ -0.08
UBE2D3-228ENST00000508974 TAAR9Q96RI9 348 aa14.55□□□□□ -0.08
UBE2D3-228ENST00000508974 DPYSL5Q9BPU6 564 aa14.55□□□□□ -0.08
UBE2D3-228ENST00000508974 B3GALT1Q9Y5Z6 326 aa14.55□□□□□ -0.08
UBE2D3-228ENST00000508974 SLC30A1Q9Y6M5 507 aa14.55□□□□□ -0.08
UBE2D3-228ENST00000508974 CCDC78A2IDD5 438 aa14.54□□□□□ -0.08
UBE2D3-228ENST00000508974 C5orf60A6NFR6 353 aa14.54□□□□□ -0.08
UBE2D3-228ENST00000508974 LILRA5A6NI73 299 aa14.54□□□□□ -0.08
UBE2D3-228ENST00000508974 PRR19A6NJB7 356 aa14.54□□□□□ -0.08
UBE2D3-228ENST00000508974 K7ENP7 123 aa14.54□□□□□ -0.08
UBE2D3-228ENST00000508974 EFSO43281 561 aa14.54□□□□□ -0.08
UBE2D3-228ENST00000508974 PPFIA2O75334 1257 aa14.54□□□□□ -0.08
UBE2D3-228ENST00000508974 SRP72O76094 671 aaKnown RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms