RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 KLHL22Q53GT1 634 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 PEAR1Q5VY43 1037 aaPredicted RBP3.89□□□□□ -1.79
NEDD4-209ENST00000508871 ARSKQ6UWY0 536 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 CATSPERGQ6ZRH7 1159 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 TXNRD3Q86VQ6 643 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 IRF2BP1Q8IU81 584 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 KBTBD2Q8IY47 623 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 ZBED8Q8IZ13 594 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 ZMIZ2Q8NF64 920 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 ENGASEQ8NFI3 743 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 STK35Q8TDR2 534 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 KLHL6Q8WZ60 621 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 SLAMF9Q96A28 289 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 HPDLQ96IR7 371 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 C1orf43Q9BWL3 253 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 TLR10Q9BXR5 811 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 FN3KQ9H479 309 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 ZNF768Q9H5H4 540 aaKnown RBP3.89□□□□□ -1.79
NEDD4-209ENST00000508871 PLEKHA2Q9HB19 425 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 FAM207AQ9NSI2 230 aaPredicted RBP3.89□□□□□ -1.79
NEDD4-209ENST00000508871 ERVK-18Q9QC07 812 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 FAM153AQ9UHL3 310 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 C14orf166Q9Y224 244 aaKnown RBP3.89□□□□□ -1.79
NEDD4-209ENST00000508871 HEMK1Q9Y5R4 338 aaPredicted RBP3.89□□□□□ -1.79
NEDD4-209ENST00000508871 SSC5DA1L4H1 1573 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 PRSS38A1L453 326 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 H0Y858 1186 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 AIM2O14862 343 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 TLX2O43763 284 aaPredicted RBP3.89□□□□□ -1.79
NEDD4-209ENST00000508871 CDH16O75309 829 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 DDNO94850 711 aaPredicted RBP3.89□□□□□ -1.79
NEDD4-209ENST00000508871 SNAP29O95721 258 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 CYP2C9P11712 490 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 GJA4P35212 333 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 ALDH3B1P43353 468 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 SLC6A12P48065 614 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 REEP5Q00765 189 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 DUSP2Q05923 314 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 CKAP4Q07065 602 aaKnown RBP3.89□□□□□ -1.79
NEDD4-209ENST00000508871 LASP1Q14847 261 aaKnown RBP3.89□□□□□ -1.79
NEDD4-209ENST00000508871 ACOX1Q15067 660 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 RPE65Q16518 533 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 DUOXA1Q1HG43 343 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 NT5DC1Q5TFE4 455 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 TMEM211Q6ICI0 200 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 CDC42EP5Q6NZY7 148 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 TMEM53Q6P2H8 277 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 FBXO42Q6P3S6 717 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 ABHD17CQ6PCB6 329 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 FAM83AQ86UY5 434 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 FMR1NBQ8N0W7 255 aaPredicted RBP3.89□□□□□ -1.79
NEDD4-209ENST00000508871 ADSSL1Q8N142 457 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 NIPA2Q8N8Q9 360 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 OR4A16Q8NH70 328 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 GRHL3Q8TE85 626 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 LMBR1Q8WVP7 490 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 PIH1D2Q8WWB5 315 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 OTULINQ96BN8 352 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 ITPKCQ96DU7 683 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 DACH2Q96NX9 599 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 TSGA13Q96PP4 275 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 H2AFJQ9BTM1 129 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 C11orf84Q9BUA3 381 aaPredicted RBP3.89□□□□□ -1.79
NEDD4-209ENST00000508871 LRRC2Q9BYS8 371 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 POLR3FQ9H1D9 316 aaPredicted RBP3.89□□□□□ -1.79
NEDD4-209ENST00000508871 TMEM245Q9H330 911 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 RIOX1Q9H6W3 641 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 TCF7L1Q9HCS4 588 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 RANGRFQ9HD47 186 aaPredicted RBP3.89□□□□□ -1.79
NEDD4-209ENST00000508871 EXOSC4Q9NPD3 245 aaKnown RBP3.89□□□□□ -1.79
NEDD4-209ENST00000508871 TLR9Q9NR96 1032 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 AP5S1Q9NUS5 200 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 BARHL2Q9NY43 387 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 PI4KBQ9UBF8 816 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.89□□□□□ -1.79
NEDD4-209ENST00000508871 HACL1Q9UJ83 578 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 TCFL5Q9UL49 500 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 OSGIN2Q9Y236 505 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 DRG1Q9Y295 367 aaKnown RBP3.89□□□□□ -1.79
NEDD4-209ENST00000508871 IFT52Q9Y366 437 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 PAM16Q9Y3D7 125 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 FKBP7Q9Y680 259 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 SIP14410 1827 aa3.89□□□□□ -1.79
NEDD4-209ENST00000508871 HELTA6NFD8 242 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 TTC34A8MYJ7 566 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 TRDMT1O14717 391 aaKnown RBP3.88□□□□□ -1.79
NEDD4-209ENST00000508871 LRRTM2O43300 516 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 PLGP00747 810 aaPredicted RBP3.88□□□□□ -1.79
NEDD4-209ENST00000508871 CYBBP04839 570 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 LYNP07948 512 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 PRKAR1AP10644 381 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 PRKACBP22694 351 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 TM4SF4P48230 202 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 ACVR2BQ13705 512 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 TCTE1Q5JU00 501 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 COL13A1Q5TAT6 717 aaPredicted RBP3.88□□□□□ -1.79
NEDD4-209ENST00000508871 ANKRD26P1Q6NSI1 321 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 RHOUQ7L0Q8 258 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 SERPINA12Q8IW75 414 aa3.88□□□□□ -1.79
NEDD4-209ENST00000508871 DCUN1D3Q8IWE4 304 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms