RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 OGFRQ9NZT2 677 aa14.05□□□□□ -0.16
RAB28-205ENST00000508274 HACD3Q9P035 362 aa14.05□□□□□ -0.16
RAB28-205ENST00000508274 EFR3BQ9Y2G0 817 aa14.05□□□□□ -0.16
RAB28-205ENST00000508274 SLC30A1Q9Y6M5 507 aa14.05□□□□□ -0.16
RAB28-205ENST00000508274 COL6A6A6NMZ7 2263 aa14.05□□□□□ -0.16
RAB28-205ENST00000508274 GLYATL1P3A0A0U1RQE8 302 aa14.05□□□□□ -0.16
RAB28-205ENST00000508274 LILRA5A6NI73 299 aa14.05□□□□□ -0.16
RAB28-205ENST00000508274 OR5K4A6NMS3 321 aa14.05□□□□□ -0.16
RAB28-205ENST00000508274 ANXA9O76027 345 aa14.05□□□□□ -0.16
RAB28-205ENST00000508274 CTSCP53634 463 aa14.05□□□□□ -0.16
RAB28-205ENST00000508274 GEMP55040 296 aa14.05□□□□□ -0.16
RAB28-205ENST00000508274 GFERP55789 205 aa14.05□□□□□ -0.16
RAB28-205ENST00000508274 C19orf57Q0VDD7 668 aa14.05□□□□□ -0.16
RAB28-205ENST00000508274 ANKRD20A2Q5SQ80 823 aa14.05□□□□□ -0.16
RAB28-205ENST00000508274 MANEAQ5SRI9 462 aa14.05□□□□□ -0.16
RAB28-205ENST00000508274 ANKRD20A1Q5TYW2 823 aa14.05□□□□□ -0.16
RAB28-205ENST00000508274 ANKRD20A3Q5VUR7 823 aa14.05□□□□□ -0.16
RAB28-205ENST00000508274 ANKS6Q68DC2 871 aa14.05□□□□□ -0.16
RAB28-205ENST00000508274 ARHGAP22Q7Z5H3 698 aa14.05□□□□□ -0.16
RAB28-205ENST00000508274 KIAA1328Q86T90 577 aa14.05□□□□□ -0.16
RAB28-205ENST00000508274 CDKL3Q8IVW4 592 aaPredicted RBP14.05□□□□□ -0.16
RAB28-205ENST00000508274 RASGEF1AQ8N9B8 481 aa14.05□□□□□ -0.16
RAB28-205ENST00000508274 CCDC110Q8TBZ0 833 aa14.05□□□□□ -0.16
RAB28-205ENST00000508274 NAT14Q8WUY8 206 aa14.05□□□□□ -0.16
RAB28-205ENST00000508274 BAG1Q99933 345 aaPredicted RBP14.05□□□□□ -0.16
RAB28-205ENST00000508274 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.05□□□□□ -0.16
RAB28-205ENST00000508274 B3GNT4Q9C0J1 378 aa14.05□□□□□ -0.16
RAB28-205ENST00000508274 WDR37Q9Y2I8 494 aa14.05□□□□□ -0.16
RAB28-205ENST00000508274 PKP3Q9Y446 797 aa14.05□□□□□ -0.16
RAB28-205ENST00000508274 KCTD3Q9Y597 815 aa14.05□□□□□ -0.16
RAB28-205ENST00000508274 PCDHGA4Q9Y5G9 962 aa14.05□□□□□ -0.16
RAB28-205ENST00000508274 PCDHGA3Q9Y5H0 932 aa14.05□□□□□ -0.16
RAB28-205ENST00000508274 OR2AG2A6NM03 316 aa14.04□□□□□ -0.16
RAB28-205ENST00000508274 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.04□□□□□ -0.16
RAB28-205ENST00000508274 STMND1H3BQB6 276 aa14.04□□□□□ -0.16
RAB28-205ENST00000508274 VIPP01282 170 aa14.04□□□□□ -0.16
RAB28-205ENST00000508274 TYRP1P17643 537 aa14.04□□□□□ -0.16
RAB28-205ENST00000508274 XRCC1P18887 633 aaPredicted RBP14.04□□□□□ -0.16
RAB28-205ENST00000508274 CD82P27701 267 aa14.04□□□□□ -0.16
RAB28-205ENST00000508274 ADRA1AP35348 466 aa14.04□□□□□ -0.16
RAB28-205ENST00000508274 GTF2H3Q13889 308 aa14.04□□□□□ -0.16
RAB28-205ENST00000508274 CLCA4Q14CN2 919 aa14.04□□□□□ -0.16
RAB28-205ENST00000508274 GPRC6AQ5T6X5 926 aa14.04□□□□□ -0.16
RAB28-205ENST00000508274 ZDHHC20Q5W0Z9 365 aa14.04□□□□□ -0.16
RAB28-205ENST00000508274 ITPRIPL1Q6GPH6 555 aa14.04□□□□□ -0.16
RAB28-205ENST00000508274 DARS2Q6PI48 645 aaKnown RBP14.04□□□□□ -0.16
RAB28-205ENST00000508274 ABRAXAS1Q6UWZ7 409 aa14.04□□□□□ -0.16
RAB28-205ENST00000508274 TMEM26Q6ZUK4 368 aa14.04□□□□□ -0.16
RAB28-205ENST00000508274 TRIM48Q8IWZ4 208 aa14.04□□□□□ -0.16
RAB28-205ENST00000508274 SPC24Q8NBT2 197 aa14.04□□□□□ -0.16
RAB28-205ENST00000508274 CALR3Q96L12 384 aaKnown RBP14.04□□□□□ -0.16
RAB28-205ENST00000508274 TTC25Q96NG3 672 aa14.04□□□□□ -0.16
RAB28-205ENST00000508274 CTRCQ99895 268 aa14.04□□□□□ -0.16
RAB28-205ENST00000508274 DDA1Q9BW61 102 aa14.04□□□□□ -0.16
RAB28-205ENST00000508274 APMAPQ9HDC9 416 aa14.04□□□□□ -0.16
RAB28-205ENST00000508274 PCDHB11Q9Y5F2 797 aa14.04□□□□□ -0.16
RAB28-205ENST00000508274 BSNQ9UPA5 3926 aa14.03□□□□□ -0.16
RAB28-205ENST00000508274 MN1Q10571 1320 aaPredicted RBP14.03□□□□□ -0.16
RAB28-205ENST00000508274 STX7O15400 261 aaKnown RBP14.03□□□□□ -0.16
RAB28-205ENST00000508274 PRAMEF1O95521 474 aa14.03□□□□□ -0.16
RAB28-205ENST00000508274 FTCDO95954 541 aa14.03□□□□□ -0.16
RAB28-205ENST00000508274 PBLDP30039 288 aaPredicted RBP14.03□□□□□ -0.16
RAB28-205ENST00000508274 CYP4F2P78329 520 aa14.03□□□□□ -0.16
RAB28-205ENST00000508274 RANBP10Q6VN20 620 aa14.03□□□□□ -0.16
RAB28-205ENST00000508274 MICALCLQ6ZW33 695 aa14.03□□□□□ -0.16
RAB28-205ENST00000508274 CCDC112Q8NEF3 446 aa14.03□□□□□ -0.16
RAB28-205ENST00000508274 DDHD1Q8NEL9 900 aa14.03□□□□□ -0.16
RAB28-205ENST00000508274 DTX3LQ8TDB6 740 aa14.03□□□□□ -0.16
RAB28-205ENST00000508274 NKD1Q969G9 470 aa14.03□□□□□ -0.16
RAB28-205ENST00000508274 SGF29Q96ES7 293 aa14.03□□□□□ -0.16
RAB28-205ENST00000508274 WBP1Q96G27 269 aa14.03□□□□□ -0.16
RAB28-205ENST00000508274 SPATA13Q96N96 652 aa14.03□□□□□ -0.16
RAB28-205ENST00000508274 FKBPLQ9UIM3 349 aa14.03□□□□□ -0.16
RAB28-205ENST00000508274 ZNF462Q96JM2 2506 aa14.03□□□□□ -0.16
RAB28-205ENST00000508274 B4E171 279 aa14.02□□□□□ -0.16
RAB28-205ENST00000508274 DDX3YO15523 660 aaKnown RBP14.02□□□□□ -0.16
RAB28-205ENST00000508274 UBXN7O94888 489 aa14.02□□□□□ -0.16
RAB28-205ENST00000508274 TJP3O95049 919 aa14.02□□□□□ -0.16
RAB28-205ENST00000508274 IDSP22304 550 aa14.02□□□□□ -0.16
RAB28-205ENST00000508274 TSPAN7P41732 249 aa14.02□□□□□ -0.16
RAB28-205ENST00000508274 MSLNQ13421 630 aaPredicted RBP14.02□□□□□ -0.16
RAB28-205ENST00000508274 ITGA9Q13797 1035 aa14.02□□□□□ -0.16
RAB28-205ENST00000508274 GPR18Q14330 331 aa14.02□□□□□ -0.16
RAB28-205ENST00000508274 SPARCL1Q14515 664 aa14.02□□□□□ -0.16
RAB28-205ENST00000508274 TAF1AQ15573 450 aaPredicted RBP14.02□□□□□ -0.16
RAB28-205ENST00000508274 LDLRAP1Q5SW96 308 aa14.02□□□□□ -0.16
RAB28-205ENST00000508274 TMEM220Q6QAJ8 160 aa14.02□□□□□ -0.16
RAB28-205ENST00000508274 FAM83HQ6ZRV2 1179 aaPredicted RBP14.02□□□□□ -0.16
RAB28-205ENST00000508274 DET1Q7L5Y6 550 aa14.02□□□□□ -0.16
RAB28-205ENST00000508274 PEX26Q7Z412 305 aa14.02□□□□□ -0.16
RAB28-205ENST00000508274 BEND7Q8N7W2 519 aaPredicted RBP14.02□□□□□ -0.16
RAB28-205ENST00000508274 AVL9Q8NBF6 648 aa14.02□□□□□ -0.16
RAB28-205ENST00000508274 OR4K2Q8NGD2 314 aa14.02□□□□□ -0.16
RAB28-205ENST00000508274 GPR150Q8NGU9 434 aa14.02□□□□□ -0.16
RAB28-205ENST00000508274 BRSK1Q8TDC3 778 aa14.02□□□□□ -0.16
RAB28-205ENST00000508274 RSC1A1Q92681 617 aa14.02□□□□□ -0.16
RAB28-205ENST00000508274 RTP4Q96DX8 246 aa14.02□□□□□ -0.16
RAB28-205ENST00000508274 RNF31Q96EP0 1072 aa14.02□□□□□ -0.16
RAB28-205ENST00000508274 FERMT1Q9BQL6 677 aa14.02□□□□□ -0.16
RAB28-205ENST00000508274 ZCCHC2Q9C0B9 1178 aaKnown RBP14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms