RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 PBLDP30039 288 aaPredicted RBP5.66□□□□□ -1.5
GYPB-208ENST00000507009 HNRNPH3P31942 346 aaKnown RBP5.66□□□□□ -1.5
GYPB-208ENST00000507009 ARCN1P48444 511 aaKnown RBP5.66□□□□□ -1.5
GYPB-208ENST00000507009 SPINT3P49223 89 aa5.66□□□□□ -1.5
GYPB-208ENST00000507009 CDH6P55285 790 aa5.66□□□□□ -1.5
GYPB-208ENST00000507009 UBE2HP62256 183 aa5.66□□□□□ -1.5
GYPB-208ENST00000507009 UBE2IP63279 158 aaKnown RBP5.66□□□□□ -1.5
GYPB-208ENST00000507009 UBXN1Q04323 297 aa5.66□□□□□ -1.5
GYPB-208ENST00000507009 CDK18Q07002 472 aa5.66□□□□□ -1.5
GYPB-208ENST00000507009 MAMLD1Q13495 774 aa5.66□□□□□ -1.5
GYPB-208ENST00000507009 ELOAQ14241 798 aaKnown RBP5.66□□□□□ -1.5
GYPB-208ENST00000507009 GPR18Q14330 331 aa5.66□□□□□ -1.5
GYPB-208ENST00000507009 GALNT3Q14435 633 aa5.66□□□□□ -1.5
GYPB-208ENST00000507009 KRT81Q14533 505 aa5.66□□□□□ -1.5
GYPB-208ENST00000507009 NAA30Q147X3 362 aaPredicted RBP5.66□□□□□ -1.5
GYPB-208ENST00000507009 PLCL1Q15111 1095 aa5.66□□□□□ -1.5
GYPB-208ENST00000507009 GPR19Q15760 415 aa5.66□□□□□ -1.5
GYPB-208ENST00000507009 UGT8Q16880 541 aa5.66□□□□□ -1.5
GYPB-208ENST00000507009 ZNF569Q5MCW4 686 aa5.66□□□□□ -1.5
GYPB-208ENST00000507009 HGSNATQ68CP4 663 aa5.66□□□□□ -1.5
GYPB-208ENST00000507009 SLC6A19Q695T7 634 aa5.66□□□□□ -1.5
GYPB-208ENST00000507009 CYP4V2Q6ZWL3 525 aaPredicted RBP5.66□□□□□ -1.5
GYPB-208ENST00000507009 TMEM126BQ8IUX1 230 aa5.66□□□□□ -1.5
GYPB-208ENST00000507009 CISD2Q8N5K1 135 aaKnown RBP5.66□□□□□ -1.5
GYPB-208ENST00000507009 FDCSPQ8NFU4 85 aa5.66□□□□□ -1.5
GYPB-208ENST00000507009 GDAP1Q8TB36 358 aa5.66□□□□□ -1.5
GYPB-208ENST00000507009 CCHCR1Q8TD31 782 aa5.66□□□□□ -1.5
GYPB-208ENST00000507009 THAP4Q8WY91 577 aa5.66□□□□□ -1.5
GYPB-208ENST00000507009 CLIP3Q96DZ5 547 aa5.66□□□□□ -1.5
GYPB-208ENST00000507009 ZDHHC12Q96GR4 267 aa5.66□□□□□ -1.5
GYPB-208ENST00000507009 C5orf34Q96MH7 638 aa5.66□□□□□ -1.5
GYPB-208ENST00000507009 CSPG4P5Q96PW8 444 aa5.66□□□□□ -1.5
GYPB-208ENST00000507009 WDR24Q96S15 920 aa5.66□□□□□ -1.5
GYPB-208ENST00000507009 OCSTAMPQ9BR26 566 aa5.66□□□□□ -1.5
GYPB-208ENST00000507009 NUDT9Q9BW91 350 aa5.66□□□□□ -1.5
GYPB-208ENST00000507009 POLR1EQ9GZS1 481 aaKnown RBP5.66□□□□□ -1.5
GYPB-208ENST00000507009 BRD8Q9H0E9 1235 aa5.66□□□□□ -1.5
GYPB-208ENST00000507009 CLSTN2Q9H4D0 955 aa5.66□□□□□ -1.5
GYPB-208ENST00000507009 PCDH9Q9HC56 1237 aa5.66□□□□□ -1.5
GYPB-208ENST00000507009 FGF21Q9NSA1 209 aa5.66□□□□□ -1.5
GYPB-208ENST00000507009 RBM22Q9NW64 420 aaKnown RBP eCLIP5.66□□□□□ -1.5
GYPB-208ENST00000507009 SOHLH2Q9NX45 425 aa5.66□□□□□ -1.5
GYPB-208ENST00000507009 DTLQ9NZJ0 730 aa5.66□□□□□ -1.5
GYPB-208ENST00000507009 PKD2L2Q9NZM6 624 aa5.66□□□□□ -1.5
GYPB-208ENST00000507009 VPS18Q9P253 973 aa5.66□□□□□ -1.5
GYPB-208ENST00000507009 ZNF624Q9P2J8 865 aaPredicted RBP5.66□□□□□ -1.5
GYPB-208ENST00000507009 FAM8A1Q9UBU6 413 aa5.66□□□□□ -1.5
GYPB-208ENST00000507009 ERRFI1Q9UJM3 462 aaPredicted RBP5.66□□□□□ -1.5
GYPB-208ENST00000507009 SNX7Q9UNH6 387 aa5.66□□□□□ -1.5
GYPB-208ENST00000507009 PSMD13Q9UNM6 376 aa5.66□□□□□ -1.5
GYPB-208ENST00000507009 SHOC2Q9UQ13 582 aa5.66□□□□□ -1.5
GYPB-208ENST00000507009 FARSAQ9Y285 508 aaKnown RBP5.66□□□□□ -1.5
GYPB-208ENST00000507009 LRBAP50851 2863 aa5.66□□□□□ -1.5
GYPB-208ENST00000507009 PRRC2CQ9Y520 2896 aaKnown RBP5.65□□□□□ -1.5
GYPB-208ENST00000507009 UBA6A0AVT1 1052 aaPredicted RBP5.65□□□□□ -1.5
GYPB-208ENST00000507009 TMEM191CA6NGB0 347 aa5.65□□□□□ -1.5
GYPB-208ENST00000507009 EIF3CLB5ME19 914 aaKnown RBP5.65□□□□□ -1.5
GYPB-208ENST00000507009 KMOO15229 486 aa5.65□□□□□ -1.5
GYPB-208ENST00000507009 MFSD11O43934 449 aa5.65□□□□□ -1.5
GYPB-208ENST00000507009 SCRG1O75711 98 aa5.65□□□□□ -1.5
GYPB-208ENST00000507009 TMEM63AO94886 807 aa5.65□□□□□ -1.5
GYPB-208ENST00000507009 LDLRP01130 860 aa5.65□□□□□ -1.5
GYPB-208ENST00000507009 BRAFP15056 766 aa5.65□□□□□ -1.5
GYPB-208ENST00000507009 FERP16591 822 aa5.65□□□□□ -1.5
GYPB-208ENST00000507009 ZNF7P17097 686 aaPredicted RBP5.65□□□□□ -1.5
GYPB-208ENST00000507009 NELFEP18615 380 aaKnown RBP5.65□□□□□ -1.5
GYPB-208ENST00000507009 IL1R2P27930 398 aa5.65□□□□□ -1.5
GYPB-208ENST00000507009 OTX2P32243 289 aa5.65□□□□□ -1.5
GYPB-208ENST00000507009 SERPINB6P35237 376 aa5.65□□□□□ -1.5
GYPB-208ENST00000507009 CD86P42081 329 aa5.65□□□□□ -1.5
GYPB-208ENST00000507009 HALP42357 657 aa5.65□□□□□ -1.5
GYPB-208ENST00000507009 CAPZBP47756 277 aa5.65□□□□□ -1.5
GYPB-208ENST00000507009 ZNF165P49910 485 aa5.65□□□□□ -1.5
GYPB-208ENST00000507009 RELBQ01201 579 aa5.65□□□□□ -1.5
GYPB-208ENST00000507009 IHHQ14623 411 aa5.65□□□□□ -1.5
GYPB-208ENST00000507009 PCSK7Q16549 785 aa5.65□□□□□ -1.5
GYPB-208ENST00000507009 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.65□□□□□ -1.5
GYPB-208ENST00000507009 ANKRD20A8PQ5CZ79 823 aa5.65□□□□□ -1.5
GYPB-208ENST00000507009 DNTTIP2Q5QJE6 756 aaKnown RBP5.65□□□□□ -1.5
GYPB-208ENST00000507009 CCDC122Q5T0U0 273 aa5.65□□□□□ -1.5
GYPB-208ENST00000507009 HENMT1Q5T8I9 393 aaKnown RBP5.65□□□□□ -1.5
GYPB-208ENST00000507009 PRAMEF17Q5VTA0 474 aa5.65□□□□□ -1.5
GYPB-208ENST00000507009 C1QL3Q5VWW1 255 aa5.65□□□□□ -1.5
GYPB-208ENST00000507009 TXNRD3NBQ6F5E7 133 aa5.65□□□□□ -1.5
GYPB-208ENST00000507009 CYB5D1Q6P9G0 228 aa5.65□□□□□ -1.5
GYPB-208ENST00000507009 FBXO38Q6PIJ6 1188 aa5.65□□□□□ -1.5
GYPB-208ENST00000507009 PRSS42Q7Z5A4 293 aa5.65□□□□□ -1.5
GYPB-208ENST00000507009 POLNQ7Z5Q5 900 aa5.65□□□□□ -1.5
GYPB-208ENST00000507009 ADGRG6Q86SQ4 1221 aa5.65□□□□□ -1.5
GYPB-208ENST00000507009 SYVN1Q86TM6 617 aa5.65□□□□□ -1.5
GYPB-208ENST00000507009 LRRTM4Q86VH4 590 aa5.65□□□□□ -1.5
GYPB-208ENST00000507009 TRAPPC5Q8IUR0 188 aa5.65□□□□□ -1.5
GYPB-208ENST00000507009 RHOT1Q8IXI2 618 aa5.65□□□□□ -1.5
GYPB-208ENST00000507009 ENDOVQ8N8Q3 282 aaKnown RBP5.65□□□□□ -1.5
GYPB-208ENST00000507009 Q8NA96 180 aa5.65□□□□□ -1.5
GYPB-208ENST00000507009 AVL9Q8NBF6 648 aa5.65□□□□□ -1.5
GYPB-208ENST00000507009 CCNYQ8ND76 341 aa5.65□□□□□ -1.5
GYPB-208ENST00000507009 GPR150Q8NGU9 434 aa5.65□□□□□ -1.5
GYPB-208ENST00000507009 KLHL6Q8WZ60 621 aa5.65□□□□□ -1.5
GYPB-208ENST00000507009 SNRNP40Q96DI7 357 aaKnown RBP5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms