RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 ABHD18Q0P651 414 aa14.19□□□□□ -0.14
HMGCS1-203ENST00000507004 IL11RAQ14626 422 aa14.19□□□□□ -0.14
HMGCS1-203ENST00000507004 NOMO1Q15155 1222 aa14.19□□□□□ -0.14
HMGCS1-203ENST00000507004 ATP13A5Q4VNC0 1218 aa14.19□□□□□ -0.14
HMGCS1-203ENST00000507004 CRTC2Q53ET0 693 aaPredicted RBP14.19□□□□□ -0.14
HMGCS1-203ENST00000507004 SIRPB2Q5JXA9 342 aa14.19□□□□□ -0.14
HMGCS1-203ENST00000507004 SNAP47Q5SQN1 464 aa14.19□□□□□ -0.14
HMGCS1-203ENST00000507004 ANKS6Q68DC2 871 aa14.19□□□□□ -0.14
HMGCS1-203ENST00000507004 VASH2Q86V25 355 aa14.19□□□□□ -0.14
HMGCS1-203ENST00000507004 AMZ2Q86W34 360 aa14.19□□□□□ -0.14
HMGCS1-203ENST00000507004 TTC30BQ8N4P2 665 aa14.19□□□□□ -0.14
HMGCS1-203ENST00000507004 ESX1Q8N693 406 aa14.19□□□□□ -0.14
HMGCS1-203ENST00000507004 IPMKQ8NFU5 416 aa14.19□□□□□ -0.14
HMGCS1-203ENST00000507004 BLOC1S5Q8TDH9 187 aa14.19□□□□□ -0.14
HMGCS1-203ENST00000507004 HEXDCQ8WVB3 486 aa14.19□□□□□ -0.14
HMGCS1-203ENST00000507004 UBE2Q2Q8WVN8 375 aa14.19□□□□□ -0.14
HMGCS1-203ENST00000507004 ZFPM2Q8WW38 1151 aa14.19□□□□□ -0.14
HMGCS1-203ENST00000507004 RTP4Q96DX8 246 aa14.19□□□□□ -0.14
HMGCS1-203ENST00000507004 MRFAP1L1Q96HT8 127 aa14.19□□□□□ -0.14
HMGCS1-203ENST00000507004 MRGPRX2Q96LB1 330 aa14.19□□□□□ -0.14
HMGCS1-203ENST00000507004 C9orf72Q96LT7 481 aa14.19□□□□□ -0.14
HMGCS1-203ENST00000507004 GBA3Q9H227 469 aa14.19□□□□□ -0.14
HMGCS1-203ENST00000507004 EPHA6Q9UF33 1036 aa14.19□□□□□ -0.14
HMGCS1-203ENST00000507004 PILRAQ9UKJ1 303 aa14.19□□□□□ -0.14
HMGCS1-203ENST00000507004 TMEM184BQ9Y519 407 aaPredicted RBP14.19□□□□□ -0.14
HMGCS1-203ENST00000507004 PCDHA3Q9Y5H8 950 aa14.19□□□□□ -0.14
HMGCS1-203ENST00000507004 HEMK1Q9Y5R4 338 aaPredicted RBP14.19□□□□□ -0.14
HMGCS1-203ENST00000507004 EPN1Q9Y6I3 576 aaPredicted RBP14.19□□□□□ -0.14
HMGCS1-203ENST00000507004 LOC400499M0QZD8 3231 aa14.19□□□□□ -0.14
HMGCS1-203ENST00000507004 SDK2Q58EX2 2172 aa14.18□□□□□ -0.14
HMGCS1-203ENST00000507004 C5orf60A6NFR6 353 aa14.18□□□□□ -0.14
HMGCS1-203ENST00000507004 A8MU76 341 aa14.18□□□□□ -0.14
HMGCS1-203ENST00000507004 TJP3O95049 919 aa14.18□□□□□ -0.14
HMGCS1-203ENST00000507004 NDUFA10O95299 355 aa14.18□□□□□ -0.14
HMGCS1-203ENST00000507004 RWDD2BP57060 319 aa14.18□□□□□ -0.14
HMGCS1-203ENST00000507004 PRSS42Q7Z5A4 293 aa14.18□□□□□ -0.14
HMGCS1-203ENST00000507004 BPHLQ86WA6 291 aaPredicted RBP14.18□□□□□ -0.14
HMGCS1-203ENST00000507004 ZNF547Q8IVP9 402 aa14.18□□□□□ -0.14
HMGCS1-203ENST00000507004 OXNAD1Q96HP4 312 aaPredicted RBP14.18□□□□□ -0.14
HMGCS1-203ENST00000507004 SLC45A3Q96JT2 553 aa14.18□□□□□ -0.14
HMGCS1-203ENST00000507004 TBC1D10AQ9BXI6 508 aa14.18□□□□□ -0.14
HMGCS1-203ENST00000507004 SLC12A9Q9BXP2 914 aa14.18□□□□□ -0.14
HMGCS1-203ENST00000507004 FAM117AQ9C073 453 aa14.18□□□□□ -0.14
HMGCS1-203ENST00000507004 BPIFA1Q9NP55 256 aa14.18□□□□□ -0.14
HMGCS1-203ENST00000507004 ARFGAP3Q9NP61 516 aa14.18□□□□□ -0.14
HMGCS1-203ENST00000507004 ZNF624Q9P2J8 865 aaPredicted RBP14.18□□□□□ -0.14
HMGCS1-203ENST00000507004 SLC23A2Q9UGH3 650 aa14.18□□□□□ -0.14
HMGCS1-203ENST00000507004 TUBD1Q9UJT1 453 aa14.18□□□□□ -0.14
HMGCS1-203ENST00000507004 DNAJC16Q9Y2G8 782 aa14.18□□□□□ -0.14
HMGCS1-203ENST00000507004 SMG1Q96Q15 3661 aaKnown RBP14.18□□□□□ -0.14
HMGCS1-203ENST00000507004 GOLGA6L9A6NEM1 432 aa14.17□□□□□ -0.14
HMGCS1-203ENST00000507004 AURKAO14965 403 aa14.17□□□□□ -0.14
HMGCS1-203ENST00000507004 CRTAMO95727 393 aa14.17□□□□□ -0.14
HMGCS1-203ENST00000507004 RALBP11234 206 aa14.17□□□□□ -0.14
HMGCS1-203ENST00000507004 MSH3P20585 1137 aa14.17□□□□□ -0.14
HMGCS1-203ENST00000507004 LPOP22079 712 aaPredicted RBP14.17□□□□□ -0.14
HMGCS1-203ENST00000507004 FECHP22830 423 aa14.17□□□□□ -0.14
HMGCS1-203ENST00000507004 CAPZBP47756 277 aa14.17□□□□□ -0.14
HMGCS1-203ENST00000507004 ARSDP51689 593 aa14.17□□□□□ -0.14
HMGCS1-203ENST00000507004 NAP1L1P55209 391 aaKnown RBP14.17□□□□□ -0.14
HMGCS1-203ENST00000507004 TAF1AQ15573 450 aaPredicted RBP14.17□□□□□ -0.14
HMGCS1-203ENST00000507004 LINC00303Q3SY05 128 aa14.17□□□□□ -0.14
HMGCS1-203ENST00000507004 ZNF648Q5T619 568 aaPredicted RBP14.17□□□□□ -0.14
HMGCS1-203ENST00000507004 BORAQ6PGQ7 559 aa14.17□□□□□ -0.14
HMGCS1-203ENST00000507004 C11orf96Q7Z7L8 435 aa14.17□□□□□ -0.14
HMGCS1-203ENST00000507004 SLC25A41Q8N5S1 370 aa14.17□□□□□ -0.14
HMGCS1-203ENST00000507004 TTC13Q8NBP0 860 aa14.17□□□□□ -0.14
HMGCS1-203ENST00000507004 UBXN4Q92575 508 aa14.17□□□□□ -0.14
HMGCS1-203ENST00000507004 EXTL1Q92935 676 aa14.17□□□□□ -0.14
HMGCS1-203ENST00000507004 ULK4Q96C45 1275 aa14.17□□□□□ -0.14
HMGCS1-203ENST00000507004 CD180Q99467 661 aa14.17□□□□□ -0.14
HMGCS1-203ENST00000507004 OSBPL8Q9BZF1 889 aa14.17□□□□□ -0.14
HMGCS1-203ENST00000507004 SPRY4Q9C004 299 aa14.17□□□□□ -0.14
HMGCS1-203ENST00000507004 SEMA4CQ9C0C4 833 aa14.17□□□□□ -0.14
HMGCS1-203ENST00000507004 ZNF768Q9H5H4 540 aaKnown RBP14.17□□□□□ -0.14
HMGCS1-203ENST00000507004 GPN2Q9H9Y4 310 aaPredicted RBP14.17□□□□□ -0.14
HMGCS1-203ENST00000507004 SLC40A1Q9NP59 571 aa14.17□□□□□ -0.14
HMGCS1-203ENST00000507004 GEMIN8Q9NWZ8 242 aaKnown RBP14.17□□□□□ -0.14
HMGCS1-203ENST00000507004 ACSL5Q9ULC5 683 aa14.17□□□□□ -0.14
HMGCS1-203ENST00000507004 PJA2O43164 708 aa14.16□□□□□ -0.14
HMGCS1-203ENST00000507004 MTX2O75431 263 aa14.16□□□□□ -0.14
HMGCS1-203ENST00000507004 POP7O75817 140 aaKnown RBP14.16□□□□□ -0.14
HMGCS1-203ENST00000507004 STK17BO94768 372 aa14.16□□□□□ -0.14
HMGCS1-203ENST00000507004 MT-ND3P03897 115 aa14.16□□□□□ -0.14
HMGCS1-203ENST00000507004 RBP3P10745 1247 aa14.16□□□□□ -0.14
HMGCS1-203ENST00000507004 RBL1P28749 1068 aa14.16□□□□□ -0.14
HMGCS1-203ENST00000507004 HADHAP40939 763 aa14.16□□□□□ -0.14
HMGCS1-203ENST00000507004 ADCY2Q08462 1091 aa14.16□□□□□ -0.14
HMGCS1-203ENST00000507004 CHRNA6Q15825 494 aa14.16□□□□□ -0.14
HMGCS1-203ENST00000507004 TBR1Q16650 682 aa14.16□□□□□ -0.14
HMGCS1-203ENST00000507004 PLA2G4EQ3MJ16 856 aa14.16□□□□□ -0.14
HMGCS1-203ENST00000507004 GPRC6AQ5T6X5 926 aa14.16□□□□□ -0.14
HMGCS1-203ENST00000507004 FAM151BQ6UXP7 276 aa14.16□□□□□ -0.14
HMGCS1-203ENST00000507004 RANBP10Q6VN20 620 aa14.16□□□□□ -0.14
HMGCS1-203ENST00000507004 B4GALNT4Q76KP1 1039 aa14.16□□□□□ -0.14
HMGCS1-203ENST00000507004 KMT5CQ86Y97 462 aa14.16□□□□□ -0.14
HMGCS1-203ENST00000507004 SYCE1Q8N0S2 351 aa14.16□□□□□ -0.14
HMGCS1-203ENST00000507004 CARFQ8N187 725 aa14.16□□□□□ -0.14
HMGCS1-203ENST00000507004 ACTL9Q8TC94 416 aa14.16□□□□□ -0.14
HMGCS1-203ENST00000507004 ZNF398Q8TD17 642 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms