RNA–Protein interactions for RNA: ENST00000506971.1

CALCOCO2-208, Transcript of calcium binding and coiled-coil domain 2, human

TSL 3

Gene CALCOCO2, Length 519 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-208	ENST00000506971	ALDOC	P09972	364 aa	Known RBP	4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	TBC1D3H	P0C7X1	549 aa		4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	TNNT1	P13805	278 aa		4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	GAP43	P17677	238 aa		4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	PTPN2	P17706	415 aa		4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	TGM2	P21980	687 aa		4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	IL10	P22301	178 aa		4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	SP100	P23497	879 aa	Predicted RBP	4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	U2AF2	P26368	475 aa	Known RBP eCLIP	4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	SYK	P43405	635 aa		4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	PSMC6	P62333	389 aa		4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	MYL5	Q02045	173 aa		4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	PMPCA	Q10713	525 aa		4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	SF3A3	Q12874	501 aa	Known RBP eCLIP	4.37	□□□□□ -1.71	7e-7	■■■□□ 18.1
CALCOCO2-208	ENST00000506971	PDCL	Q13371	301 aa		4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	CAMK4	Q16566	473 aa		4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	LRRC24	Q50LG9	513 aa		4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	CBWD5	Q5RIA9	395 aa		4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	WASHC2D	Q5SRD0	308 aa		4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	TBC1D3G	Q6DHY5	549 aa		4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	TBC1D3C	Q6IPX1	549 aa		4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	MTFR2	Q6P444	385 aa		4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	WDR73	Q6P4I2	378 aa		4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	OLFM4	Q6UX06	510 aa		4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	SLC39A5	Q6ZMH5	540 aa		4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971		Q6ZTK2	550 aa		4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	LUZP1	Q86V48	1076 aa		4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	ZNF34	Q8IZ26	560 aa		4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	TBC1D3	Q8IZP1	549 aa	Predicted RBP	4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	MLKL	Q8NB16	471 aa		4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	SMRP1	Q8NCR6	262 aa		4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	ADPRHL1	Q8NDY3	354 aa		4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	KIF18A	Q8NI77	898 aa		4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	GABPB2	Q8TAK5	448 aa	Predicted RBP	4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	HMGB4	Q8WW32	186 aa		4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	PRPF31	Q8WWY3	499 aa	Known RBP	4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	NCSTN	Q92542	709 aa		4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	KRT35	Q92764	455 aa		4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	ARHGEF2	Q92974	986 aa	Known RBP	4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	ATP6V0A1	Q93050	837 aa		4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	RBM17	Q96I25	401 aa	Known RBP	4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	ZNF479	Q96JC4	524 aa		4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	TCEANC2	Q96MN5	208 aa		4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	CCDC94	Q9BW85	323 aa	Predicted RBP	4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	GATA5	Q9BWX5	397 aa	Predicted RBP	4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	FUT8	Q9BYC5	575 aa		4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	VPS33B	Q9H267	617 aa		4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	STN1	Q9H668	368 aa	Known RBP	4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	TTC12	Q9H892	705 aa	Predicted RBP	4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	PFDN4	Q9NQP4	134 aa		4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	SIRT3	Q9NTG7	399 aa	Predicted RBP	4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	LIN7C	Q9NUP9	197 aa	Known RBP	4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	RBM28	Q9NW13	759 aa	Known RBP	4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	HCN3	Q9P1Z3	774 aa		4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	TRMT112	Q9UI30	125 aa	Known RBP	4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	SLCO3A1	Q9UIG8	710 aa		4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	TUBE1	Q9UJT0	475 aa		4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	FBXO4	Q9UKT5	387 aa		4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	BAG5	Q9UL15	447 aa		4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	TRPC5	Q9UL62	973 aa	Predicted RBP	4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	PCDHA7	Q9UN72	937 aa		4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	NHS	Q6T4R5	1651 aa		4.37	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	TGFB1I1	O43294	461 aa		4.36	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	ZSCAN12	O43309	604 aa		4.36	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	TXNL1	O43396	289 aa		4.36	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	KERA	O60938	352 aa		4.36	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	IDH1	O75874	414 aa	Known RBP	4.36	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	STAM2	O75886	525 aa		4.36	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	SMC2	O95347	1197 aa		4.36	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	PNP	P00491	289 aa		4.36	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	TPM1	P09493	284 aa		4.36	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	FDPS	P14324	419 aa	Known RBP	4.36	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	EIF3B	P55884	814 aa	Known RBP	4.36	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	TMPRSS3	P57727	454 aa		4.36	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	PRAME	P78395	509 aa		4.36	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	AKAP17A	Q02040	695 aa	Known RBP	4.36	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	IRF3	Q14653	427 aa		4.36	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	MED22	Q15528	200 aa		4.36	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	TPD52L1	Q16890	204 aa	Predicted RBP	4.36	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	TYSND1	Q2T9J0	566 aa		4.36	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	ALG10	Q5BKT4	473 aa		4.36	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	ZNF805	Q5CZA5	627 aa		4.36	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	ZNF628	Q5EBL2	1059 aa		4.36	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	ALG10B	Q5I7T1	473 aa		4.36	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	KRBOX4	Q5JUW0	171 aa		4.36	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	C10orf76	Q5T2E6	689 aa		4.36	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	UBAP2	Q5T6F2	1119 aa	Known RBP	4.36	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	KLHL35	Q6PF15	583 aa		4.36	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	TRAT1	Q6PIZ9	186 aa		4.36	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	ZNF474	Q6S9Z5	364 aa	Predicted RBP	4.36	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	CTU1	Q7Z7A3	348 aa	Known RBP	4.36	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	TRABD2A	Q86V40	505 aa		4.36	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	LRRC8A	Q8IWT6	810 aa		4.36	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	DPP10	Q8N608	796 aa		4.36	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	ZNF540	Q8NDQ6	660 aa		4.36	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	ANKRD20A12P	Q8NF67	263 aa		4.36	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	OR6J1	Q8NGC5	347 aa		4.36	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	SLC2A12	Q8TD20	617 aa		4.36	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	NOC3L	Q8WTT2	800 aa	Known RBP	4.36	□□□□□ -1.71
CALCOCO2-208	ENST00000506971	ZNF606	Q8WXB4	792 aa		4.36	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 27 ms