RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 DMPKQ09013 629 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 KIF5AQ12840 1032 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 NFATC2Q13469 925 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 OLIG2Q13516 323 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 PTPRCAPQ14761 206 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 TAF1AQ15573 450 aaPredicted RBP8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 TGIF1Q15583 401 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 INSCQ1MX18 579 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 LDLRAP1Q5SW96 308 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 ARHGAP40Q5TG30 622 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 CCDC181Q5TID7 509 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 AGAP9Q5VTM2 703 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 KCTD11Q693B1 232 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 DARS2Q6PI48 645 aaKnown RBP8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 ABRAXAS1Q6UWZ7 409 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 FAM151BQ6UXP7 276 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 PEX26Q7Z412 305 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 SYCE1Q8N0S2 351 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 TXLNBQ8N3L3 684 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 BMPERQ8N8U9 685 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 AGBL5Q8NDL9 886 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 CCDC110Q8TBZ0 833 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 BRSK1Q8TDC3 778 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 TTC9Q92623 222 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 PMEPA1Q969W9 287 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 WBP1Q96G27 269 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 HES6Q96HZ4 224 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 TAAR9Q96RI9 348 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 CCNL2Q96S94 520 aaPredicted RBP8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 C19orf43Q9BQ61 176 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 FERMT1Q9BQL6 677 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 OSGEPL1Q9H4B0 414 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 EPB41L1Q9H4G0 881 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 STN1Q9H668 368 aaKnown RBP8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 UGT1A7Q9HAW7 530 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 UGT1A10Q9HAW8 530 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 UGT1A8Q9HAW9 530 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 ARNT2Q9HBZ2 717 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 OGFRQ9NZT2 677 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 AKAP7Q9P0M2 348 aaPredicted RBP8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 ZNF624Q9P2J8 865 aaPredicted RBP8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 PACSIN2Q9UNF0 486 aaPredicted RBP8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 AAR2Q9Y312 384 aaKnown RBP8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 PKP3Q9Y446 797 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 ARL5AQ9Y689 179 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 CAPN6Q9Y6Q1 641 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 MN1Q10571 1320 aaPredicted RBP8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 LOC400499M0QZD8 3231 aa8.93□□□□□ -0.98
PDLIM5-209ENST00000506632 AGRPO00253 132 aa8.92□□□□□ -0.98
PDLIM5-209ENST00000506632 STX7O15400 261 aaKnown RBP8.92□□□□□ -0.98
PDLIM5-209ENST00000506632 KCNJ13O60928 360 aa8.92□□□□□ -0.98
PDLIM5-209ENST00000506632 C1QL1O75973 258 aa8.92□□□□□ -0.98
PDLIM5-209ENST00000506632 STK10O94804 968 aaKnown RBP8.92□□□□□ -0.98
PDLIM5-209ENST00000506632 LPOP22079 712 aaPredicted RBP8.92□□□□□ -0.98
PDLIM5-209ENST00000506632 MPSTP25325 297 aa8.92□□□□□ -0.98
PDLIM5-209ENST00000506632 CSTF2P33240 577 aaKnown RBP eCLIP8.92□□□□□ -0.98
PDLIM5-209ENST00000506632 ZNF140P52738 457 aaPredicted RBP8.92□□□□□ -0.98
PDLIM5-209ENST00000506632 CTSCP53634 463 aa8.92□□□□□ -0.98
PDLIM5-209ENST00000506632 XIAPP98170 497 aa8.92□□□□□ -0.98
PDLIM5-209ENST00000506632 SRSF6Q13247 344 aaKnown RBP8.92□□□□□ -0.98
PDLIM5-209ENST00000506632 ITGA9Q13797 1035 aa8.92□□□□□ -0.98
PDLIM5-209ENST00000506632 PLA2G4EQ3MJ16 856 aa8.92□□□□□ -0.98
PDLIM5-209ENST00000506632 GPRC6AQ5T6X5 926 aa8.92□□□□□ -0.98
PDLIM5-209ENST00000506632 CCDC81Q6ZN84 652 aa8.92□□□□□ -0.98
PDLIM5-209ENST00000506632 TMEM26Q6ZUK4 368 aa8.92□□□□□ -0.98
PDLIM5-209ENST00000506632 ZFAND4Q86XD8 727 aa8.92□□□□□ -0.98
PDLIM5-209ENST00000506632 TRAPPC5Q8IUR0 188 aa8.92□□□□□ -0.98
PDLIM5-209ENST00000506632 RNF10Q8N5U6 811 aaKnown RBP8.92□□□□□ -0.98
PDLIM5-209ENST00000506632 UBL4BQ8N7F7 174 aa8.92□□□□□ -0.98
PDLIM5-209ENST00000506632 RASGEF1AQ8N9B8 481 aa8.92□□□□□ -0.98
PDLIM5-209ENST00000506632 TTC13Q8NBP0 860 aa8.92□□□□□ -0.98
PDLIM5-209ENST00000506632 SPC24Q8NBT2 197 aa8.92□□□□□ -0.98
PDLIM5-209ENST00000506632 OR4K2Q8NGD2 314 aa8.92□□□□□ -0.98
PDLIM5-209ENST00000506632 SLC35B2Q8TB61 432 aa8.92□□□□□ -0.98
PDLIM5-209ENST00000506632 SLC39A7Q92504 469 aa8.92□□□□□ -0.98
PDLIM5-209ENST00000506632 AHCYL2Q96HN2 611 aaKnown RBP8.92□□□□□ -0.98
PDLIM5-209ENST00000506632 PPP1R2P1Q96PQ5 205 aa8.92□□□□□ -0.98
PDLIM5-209ENST00000506632 APOL2Q9BQE5 337 aa8.92□□□□□ -0.98
PDLIM5-209ENST00000506632 DDA1Q9BW61 102 aa8.92□□□□□ -0.98
PDLIM5-209ENST00000506632 TBC1D10AQ9BXI6 508 aa8.92□□□□□ -0.98
PDLIM5-209ENST00000506632 SPRY4Q9C004 299 aa8.92□□□□□ -0.98
PDLIM5-209ENST00000506632 ZCCHC2Q9C0B9 1178 aaKnown RBP8.92□□□□□ -0.98
PDLIM5-209ENST00000506632 SLC40A1Q9NP59 571 aa8.92□□□□□ -0.98
PDLIM5-209ENST00000506632 POT1Q9NUX5 634 aa8.92□□□□□ -0.98
PDLIM5-209ENST00000506632 OCIAD1Q9NX40 245 aa8.92□□□□□ -0.98
PDLIM5-209ENST00000506632 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.92□□□□□ -0.98
PDLIM5-209ENST00000506632 FEZ2Q9UHY8 353 aaPredicted RBP8.92□□□□□ -0.98
PDLIM5-209ENST00000506632 DNAJC16Q9Y2G8 782 aa8.92□□□□□ -0.98
PDLIM5-209ENST00000506632 R3HDM2Q9Y2K5 976 aaKnown RBP8.92□□□□□ -0.98
PDLIM5-209ENST00000506632 KCTD3Q9Y597 815 aa8.92□□□□□ -0.98
PDLIM5-209ENST00000506632 DNMT3AQ9Y6K1 912 aaPredicted RBP8.92□□□□□ -0.98
PDLIM5-209ENST00000506632 COL6A6A6NMZ7 2263 aa8.91□□□□□ -0.98
PDLIM5-209ENST00000506632 TCRBV7S2A1N4TA0A589 114 aa8.91□□□□□ -0.98
PDLIM5-209ENST00000506632 GOLGA6L9A6NEM1 432 aa8.91□□□□□ -0.98
PDLIM5-209ENST00000506632 C2orf81A6NN90 581 aa8.91□□□□□ -0.98
PDLIM5-209ENST00000506632 PDZK1P1A8MUH7 402 aa8.91□□□□□ -0.98
PDLIM5-209ENST00000506632 LDB2O43679 373 aa8.91□□□□□ -0.98
PDLIM5-209ENST00000506632 SGTAO43765 313 aa8.91□□□□□ -0.98
PDLIM5-209ENST00000506632 POP7O75817 140 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms