RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 PCID2Q5JVF3 399 aa7.17□□□□□ -1.26
GYPB-206ENST00000506516 CERCAMQ5T4B2 595 aa7.17□□□□□ -1.26
GYPB-206ENST00000506516 ZNF648Q5T619 568 aaPredicted RBP7.17□□□□□ -1.26
GYPB-206ENST00000506516 LYPLAL1Q5VWZ2 237 aa7.17□□□□□ -1.26
GYPB-206ENST00000506516 KCTD16Q68DU8 428 aa7.17□□□□□ -1.26
GYPB-206ENST00000506516 SLC30A9Q6PML9 568 aa7.17□□□□□ -1.26
GYPB-206ENST00000506516 DHRS13Q6UX07 377 aa7.17□□□□□ -1.26
GYPB-206ENST00000506516 SYT10Q6XYQ8 523 aa7.17□□□□□ -1.26
GYPB-206ENST00000506516 SYDE1Q6ZW31 735 aaPredicted RBP7.17□□□□□ -1.26
GYPB-206ENST00000506516 TAS2R42Q7RTR8 314 aa7.17□□□□□ -1.26
GYPB-206ENST00000506516 EFL1Q7Z2Z2 1120 aaKnown RBP7.17□□□□□ -1.26
GYPB-206ENST00000506516 SNX20Q7Z614 316 aa7.17□□□□□ -1.26
GYPB-206ENST00000506516 RAB44Q7Z6P3 723 aaPredicted RBP7.17□□□□□ -1.26
GYPB-206ENST00000506516 LRRTM4Q86VH4 590 aa7.17□□□□□ -1.26
GYPB-206ENST00000506516 TMPRSS12Q86WS5 348 aa7.17□□□□□ -1.26
GYPB-206ENST00000506516 SLC35F3Q8IY50 421 aa7.17□□□□□ -1.26
GYPB-206ENST00000506516 CHCHD4Q8N4Q1 142 aa7.17□□□□□ -1.26
GYPB-206ENST00000506516 DDHD1Q8NEL9 900 aa7.17□□□□□ -1.26
GYPB-206ENST00000506516 GPR156Q8NFN8 814 aa7.17□□□□□ -1.26
GYPB-206ENST00000506516 OR13C4Q8NGS5 318 aa7.17□□□□□ -1.26
GYPB-206ENST00000506516 CCL4L1Q8NHW4 92 aa7.17□□□□□ -1.26
GYPB-206ENST00000506516 WDR48Q8TAF3 677 aa7.17□□□□□ -1.26
GYPB-206ENST00000506516 IFI44Q8TCB0 444 aa7.17□□□□□ -1.26
GYPB-206ENST00000506516 PEX13Q92968 403 aa7.17□□□□□ -1.26
GYPB-206ENST00000506516 COL26A1Q96A83 441 aa7.17□□□□□ -1.26
GYPB-206ENST00000506516 DNAJC1Q96KC8 554 aaKnown RBP7.17□□□□□ -1.26
GYPB-206ENST00000506516 COPS8Q99627 209 aa7.17□□□□□ -1.26
GYPB-206ENST00000506516 IL22Q9GZX6 179 aa7.17□□□□□ -1.26
GYPB-206ENST00000506516 SPATS2LQ9NUQ6 558 aaKnown RBP7.17□□□□□ -1.26
GYPB-206ENST00000506516 SMOXQ9NWM0 555 aa7.17□□□□□ -1.26
GYPB-206ENST00000506516 PIH1D1Q9NWS0 290 aaKnown RBP7.17□□□□□ -1.26
GYPB-206ENST00000506516 SMARCAL1Q9NZC9 954 aa7.17□□□□□ -1.26
GYPB-206ENST00000506516 TAAR2Q9P1P5 351 aa7.17□□□□□ -1.26
GYPB-206ENST00000506516 PCYOX1Q9UHG3 505 aa7.17□□□□□ -1.26
GYPB-206ENST00000506516 RIMKLBQ9ULI2 386 aa7.17□□□□□ -1.26
GYPB-206ENST00000506516 PRKAB1Q9Y478 270 aa7.17□□□□□ -1.26
GYPB-206ENST00000506516 KCTD3Q9Y597 815 aa7.17□□□□□ -1.26
GYPB-206ENST00000506516 DNMT3AQ9Y6K1 912 aaPredicted RBP7.17□□□□□ -1.26
GYPB-206ENST00000506516 CACNA1EQ15878 2313 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 SERTM1A2A2V5 107 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 FAM221BA6H8Z2 402 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 KLHL33A6NCF5 533 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 SDR42E2A6NKP2 422 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 OR5K4A6NMS3 321 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 TTLL8A6PVC2 850 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 RHPN2P1A8MT19 583 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 AGAP14A8MT82 685 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 F8W8V4 182 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 GAPDHSO14556 408 aaPredicted RBP7.16□□□□□ -1.26
GYPB-206ENST00000506516 HYAL3O43820 417 aaPredicted RBP7.16□□□□□ -1.26
GYPB-206ENST00000506516 SNX2O60749 519 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 MTX2O75431 263 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 MLNP12872 115 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 ACP5P13686 325 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 ATP1B2P14415 290 aaPredicted RBP7.16□□□□□ -1.26
GYPB-206ENST00000506516 PNLIPP16233 465 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 ZNF7P17097 686 aaPredicted RBP7.16□□□□□ -1.26
GYPB-206ENST00000506516 IDSP22304 550 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 PSMA3P25788 255 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 MAGEA6P43360 314 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 SERPINB4P48594 390 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 CLCNKAP51800 687 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 PRAMEP78395 509 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 SHC2P98077 582 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 XIAPP98170 497 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 HLTFQ14527 1009 aaKnown RBP eCLIP7.16□□□□□ -1.26
GYPB-206ENST00000506516 SMAD1Q15797 465 aaKnown RBP7.16□□□□□ -1.26
GYPB-206ENST00000506516 C14orf28Q4W4Y0 310 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 GPRC6AQ5T6X5 926 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 TSTD2Q5T7W7 516 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 ARMC3Q5W041 872 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 GUSBP11Q6P575 273 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 TMEM220Q6QAJ8 160 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 CERS6Q6ZMG9 384 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 CAPN12Q6ZSI9 719 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 TMPRSS7Q7RTY8 843 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 AMZ2Q86W34 360 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 NRROSQ86YC3 692 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 TRAPPC5Q8IUR0 188 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 KLHL7Q8IXQ5 586 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 PPIL6Q8IXY8 311 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 ZNF295-AS1Q8N0V1 137 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 C17orf53Q8N3J3 647 aaPredicted RBP7.16□□□□□ -1.26
GYPB-206ENST00000506516 ARL14Q8N4G2 192 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 BEND7Q8N7W2 519 aaPredicted RBP7.16□□□□□ -1.26
GYPB-206ENST00000506516 MCUQ8NE86 351 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 OR6P1Q8NGX9 317 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 RNF217Q8TC41 542 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 MAPK15Q8TD08 544 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 SLCO2A1Q92959 643 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 HDAC10Q969S8 669 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.16□□□□□ -1.26
GYPB-206ENST00000506516 TIMM29Q9BSF4 260 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 SCNM1Q9BWG6 230 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 DDX47Q9H0S4 455 aaKnown RBP7.16□□□□□ -1.26
GYPB-206ENST00000506516 OSGEPL1Q9H4B0 414 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 FAM96AQ9H5X1 160 aa7.16□□□□□ -1.26
GYPB-206ENST00000506516 STN1Q9H668 368 aaKnown RBP7.16□□□□□ -1.26
GYPB-206ENST00000506516 XAB2Q9HCS7 855 aaKnown RBP7.16□□□□□ -1.26
GYPB-206ENST00000506516 CHRAC1Q9NRG0 131 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms