RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 OR13J1Q8NGT2 312 aa16.42■□□□□ 0.22
SNCA-209ENST00000506244 PATE1Q8WXA2 126 aa16.42■□□□□ 0.22
SNCA-209ENST00000506244 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.42■□□□□ 0.22
SNCA-209ENST00000506244 DDX47Q9H0S4 455 aaKnown RBP16.42■□□□□ 0.22
SNCA-209ENST00000506244 LRRN3Q9H3W5 708 aa16.42■□□□□ 0.22
SNCA-209ENST00000506244 MRM3Q9HC36 420 aaKnown RBP16.42■□□□□ 0.22
SNCA-209ENST00000506244 SARS2Q9NP81 518 aaKnown RBP16.42■□□□□ 0.22
SNCA-209ENST00000506244 WASH6PQ9NQA3 447 aa16.42■□□□□ 0.22
SNCA-209ENST00000506244 ASIC3Q9UHC3 531 aa16.42■□□□□ 0.22
SNCA-209ENST00000506244 PCYOX1Q9UHG3 505 aa16.42■□□□□ 0.22
SNCA-209ENST00000506244 RABGEF1Q9UJ41 708 aa16.42■□□□□ 0.22
SNCA-209ENST00000506244 DNAJC16Q9Y2G8 782 aa16.42■□□□□ 0.22
SNCA-209ENST00000506244 NEU2Q9Y3R4 380 aa16.42■□□□□ 0.22
SNCA-209ENST00000506244 ASXL3Q9C0F0 2248 aa16.41■□□□□ 0.22
SNCA-209ENST00000506244 IGLV3-16A0A075B6K0 115 aa16.41■□□□□ 0.22
SNCA-209ENST00000506244 POP7O75817 140 aaKnown RBP16.41■□□□□ 0.22
SNCA-209ENST00000506244 GSTM1P09488 218 aa16.41■□□□□ 0.22
SNCA-209ENST00000506244 MLNP12872 115 aa16.41■□□□□ 0.22
SNCA-209ENST00000506244 ATP1B2P14415 290 aaPredicted RBP16.41■□□□□ 0.22
SNCA-209ENST00000506244 PRLHRP49683 370 aa16.41■□□□□ 0.22
SNCA-209ENST00000506244 ARSDP51689 593 aa16.41■□□□□ 0.22
SNCA-209ENST00000506244 ETF1P62495 437 aaKnown RBP16.41■□□□□ 0.22
SNCA-209ENST00000506244 GPLD1P80108 840 aa16.41■□□□□ 0.22
SNCA-209ENST00000506244 GSTM4Q03013 218 aa16.41■□□□□ 0.22
SNCA-209ENST00000506244 PTK6Q13882 451 aa16.41■□□□□ 0.22
SNCA-209ENST00000506244 ITIH4Q14624 930 aa16.41■□□□□ 0.22
SNCA-209ENST00000506244 MAP9Q49MG5 647 aa16.41■□□□□ 0.22
SNCA-209ENST00000506244 CERS6Q6ZMG9 384 aa16.41■□□□□ 0.22
SNCA-209ENST00000506244 DET1Q7L5Y6 550 aa16.41■□□□□ 0.22
SNCA-209ENST00000506244 C11orf96Q7Z7L8 435 aa16.41■□□□□ 0.22
SNCA-209ENST00000506244 SERPINA9Q86WD7 417 aa16.41■□□□□ 0.22
SNCA-209ENST00000506244 SFTPA2Q8IWL1 248 aa16.41■□□□□ 0.22
SNCA-209ENST00000506244 Q8N9G6 341 aaPredicted RBP16.41■□□□□ 0.22
SNCA-209ENST00000506244 MCUQ8NE86 351 aa16.41■□□□□ 0.22
SNCA-209ENST00000506244 CPT1BQ92523 772 aa16.41■□□□□ 0.22
SNCA-209ENST00000506244 SGSM3Q96HU1 749 aa16.41■□□□□ 0.22
SNCA-209ENST00000506244 LINC00615Q96LM1 132 aaPredicted RBP16.41■□□□□ 0.22
SNCA-209ENST00000506244 TMEM121BQ9BXQ6 578 aaPredicted RBP16.41■□□□□ 0.22
SNCA-209ENST00000506244 NRSN2Q9GZP1 204 aa16.41■□□□□ 0.22
SNCA-209ENST00000506244 ZMYND15Q9H091 742 aa16.41■□□□□ 0.22
SNCA-209ENST00000506244 FAM96AQ9H5X1 160 aa16.41■□□□□ 0.22
SNCA-209ENST00000506244 PRDM8Q9NQV8 689 aa16.41■□□□□ 0.22
SNCA-209ENST00000506244 SAMD15Q9P1V8 674 aa16.41■□□□□ 0.22
SNCA-209ENST00000506244 SLC23A2Q9UGH3 650 aa16.41■□□□□ 0.22
SNCA-209ENST00000506244 ANAPC5Q9UJX4 755 aa16.41■□□□□ 0.22
SNCA-209ENST00000506244 RP1P56715 2156 aa16.41■□□□□ 0.22
SNCA-209ENST00000506244 ACACBO00763 2458 aa16.4■□□□□ 0.22
SNCA-209ENST00000506244 CCDC162PA2VCL2 907 aa16.4■□□□□ 0.22
SNCA-209ENST00000506244 PRR19A6NJB7 356 aa16.4■□□□□ 0.22
SNCA-209ENST00000506244 AP2A2O94973 939 aa16.4■□□□□ 0.22
SNCA-209ENST00000506244 PAMP19021 973 aa16.4■□□□□ 0.22
SNCA-209ENST00000506244 PBLDP30039 288 aaPredicted RBP16.4■□□□□ 0.22
SNCA-209ENST00000506244 FOXN2P32314 431 aa16.4■□□□□ 0.22
SNCA-209ENST00000506244 CA5AP35218 305 aa16.4■□□□□ 0.22
SNCA-209ENST00000506244 NSG1P42857 185 aa16.4■□□□□ 0.22
SNCA-209ENST00000506244 EPHA4P54764 986 aa16.4■□□□□ 0.22
SNCA-209ENST00000506244 CCL7P80098 99 aa16.4■□□□□ 0.22
SNCA-209ENST00000506244 CAMK2BQ13554 666 aa16.4■□□□□ 0.22
SNCA-209ENST00000506244 SEPT7Q16181 437 aaKnown RBP16.4■□□□□ 0.22
SNCA-209ENST00000506244 DBN1Q16643 649 aa16.4■□□□□ 0.22
SNCA-209ENST00000506244 ISXQ2M1V0 245 aa16.4■□□□□ 0.22
SNCA-209ENST00000506244 FASTKD1Q53R41 847 aaKnown RBP16.4■□□□□ 0.22
SNCA-209ENST00000506244 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.4■□□□□ 0.22
SNCA-209ENST00000506244 PACS1Q6VY07 963 aa16.4■□□□□ 0.22
SNCA-209ENST00000506244 ZNF534Q76KX8 674 aa16.4■□□□□ 0.22
SNCA-209ENST00000506244 PCGF5Q86SE9 256 aa16.4■□□□□ 0.22
SNCA-209ENST00000506244 RBM12BQ8IXT5 1001 aaKnown RBP16.4■□□□□ 0.22
SNCA-209ENST00000506244 PPIL6Q8IXY8 311 aa16.4■□□□□ 0.22
SNCA-209ENST00000506244 BEND7Q8N7W2 519 aaPredicted RBP16.4■□□□□ 0.22
SNCA-209ENST00000506244 OR6P1Q8NGX9 317 aa16.4■□□□□ 0.22
SNCA-209ENST00000506244 OR4L1Q8NH43 312 aa16.4■□□□□ 0.22
SNCA-209ENST00000506244 HM13Q8TCT9 377 aa16.4■□□□□ 0.22
SNCA-209ENST00000506244 HDAC10Q969S8 669 aa16.4■□□□□ 0.22
SNCA-209ENST00000506244 SGF29Q96ES7 293 aa16.4■□□□□ 0.22
SNCA-209ENST00000506244 TMEM74Q96NL1 305 aa16.4■□□□□ 0.22
SNCA-209ENST00000506244 CNTNAP3BQ96NU0 1288 aa16.4■□□□□ 0.22
SNCA-209ENST00000506244 SLC38A3Q99624 504 aa16.4■□□□□ 0.22
SNCA-209ENST00000506244 DPYSL5Q9BPU6 564 aa16.4■□□□□ 0.22
SNCA-209ENST00000506244 CNTNAP3Q9BZ76 1288 aa16.4■□□□□ 0.22
SNCA-209ENST00000506244 STRADBQ9C0K7 418 aa16.4■□□□□ 0.22
SNCA-209ENST00000506244 EPB41L1Q9H4G0 881 aa16.4■□□□□ 0.22
SNCA-209ENST00000506244 POT1Q9NUX5 634 aa16.4■□□□□ 0.22
SNCA-209ENST00000506244 KCNK4Q9NYG8 393 aa16.4■□□□□ 0.22
SNCA-209ENST00000506244 CPNE7Q9UBL6 633 aa16.4■□□□□ 0.22
SNCA-209ENST00000506244 A0A1W2PQM1 296 aa16.39■□□□□ 0.21
SNCA-209ENST00000506244 TCRBV7S3A2A0A539 114 aa16.39■□□□□ 0.21
SNCA-209ENST00000506244 MGAT4DA6NG13 374 aa16.39■□□□□ 0.21
SNCA-209ENST00000506244 C1QTNF9BB2RNN3 333 aa16.39■□□□□ 0.21
SNCA-209ENST00000506244 DUX1O43812 170 aa16.39■□□□□ 0.21
SNCA-209ENST00000506244 TMEM63AO94886 807 aa16.39■□□□□ 0.21
SNCA-209ENST00000506244 CPNE6O95741 557 aa16.39■□□□□ 0.21
SNCA-209ENST00000506244 EML2O95834 649 aa16.39■□□□□ 0.21
SNCA-209ENST00000506244 GOT2P00505 430 aaKnown RBP16.39■□□□□ 0.21
SNCA-209ENST00000506244 PROS1P07225 676 aa16.39■□□□□ 0.21
SNCA-209ENST00000506244 C1QTNF9P0C862 333 aa16.39■□□□□ 0.21
SNCA-209ENST00000506244 MGAT1P26572 445 aa16.39■□□□□ 0.21
SNCA-209ENST00000506244 ALDH4A1P30038 563 aa16.39■□□□□ 0.21
SNCA-209ENST00000506244 TERF1P54274 439 aa16.39■□□□□ 0.21
SNCA-209ENST00000506244 B4GALNT1Q00973 533 aa16.39■□□□□ 0.21
SNCA-209ENST00000506244 DR1Q01658 176 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms