RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 PRMT7Q9NVM4 692 aaPredicted RBP3.85□□□□□ -1.79
TRAPPC13-208ENST00000505553 TMEM45AQ9NWC5 275 aa3.85□□□□□ -1.79
TRAPPC13-208ENST00000505553 NFS1Q9Y697 457 aa3.85□□□□□ -1.79
TRAPPC13-208ENST00000505553 TRBV5-3A0A0A0MS03 114 aa3.84□□□□□ -1.79
TRAPPC13-208ENST00000505553 GAGE12JA6NER3 117 aa3.84□□□□□ -1.79
TRAPPC13-208ENST00000505553 SLC30A4O14863 429 aa3.84□□□□□ -1.79
TRAPPC13-208ENST00000505553 MGST3O14880 152 aa3.84□□□□□ -1.79
TRAPPC13-208ENST00000505553 PGRMC2O15173 223 aa3.84□□□□□ -1.79
TRAPPC13-208ENST00000505553 ASAP2O43150 1006 aa3.84□□□□□ -1.79
TRAPPC13-208ENST00000505553 CREG1O75629 220 aa3.84□□□□□ -1.79
TRAPPC13-208ENST00000505553 MOCS3O95396 460 aa3.84□□□□□ -1.79
TRAPPC13-208ENST00000505553 OLFM2O95897 454 aa3.84□□□□□ -1.79
TRAPPC13-208ENST00000505553 CYC1P08574 325 aa3.84□□□□□ -1.79
TRAPPC13-208ENST00000505553 FAM58BPP0C7Q3 252 aa3.84□□□□□ -1.79
TRAPPC13-208ENST00000505553 ELLP55199 621 aaPredicted RBP3.84□□□□□ -1.79
TRAPPC13-208ENST00000505553 ASIC1P78348 528 aa3.84□□□□□ -1.79
TRAPPC13-208ENST00000505553 GAD2Q05329 585 aa3.84□□□□□ -1.79
TRAPPC13-208ENST00000505553 PPATQ06203 517 aa3.84□□□□□ -1.79
TRAPPC13-208ENST00000505553 MZT1Q08AG7 82 aa3.84□□□□□ -1.79
TRAPPC13-208ENST00000505553 MVPQ14764 893 aaKnown RBP3.84□□□□□ -1.79
TRAPPC13-208ENST00000505553 MEP1AQ16819 746 aa3.84□□□□□ -1.79
TRAPPC13-208ENST00000505553 LEXMQ3ZCV2 418 aa3.84□□□□□ -1.79
TRAPPC13-208ENST00000505553 FUT11Q495W5 492 aa3.84□□□□□ -1.79
TRAPPC13-208ENST00000505553 DNTTIP2Q5QJE6 756 aaKnown RBP3.84□□□□□ -1.79
TRAPPC13-208ENST00000505553 PIK3CD-AS1Q5SR53 167 aa3.84□□□□□ -1.79
TRAPPC13-208ENST00000505553 ANKRD54Q6NXT1 300 aa3.84□□□□□ -1.79
TRAPPC13-208ENST00000505553 TMEM71Q6P5X7 295 aa3.84□□□□□ -1.79
TRAPPC13-208ENST00000505553 NUP54Q7Z3B4 507 aa3.84□□□□□ -1.79
TRAPPC13-208ENST00000505553 PALB2Q86YC2 1186 aa3.84□□□□□ -1.79
TRAPPC13-208ENST00000505553 C8orf58Q8NAV2 365 aa3.84□□□□□ -1.79
TRAPPC13-208ENST00000505553 SMG7Q92540 1137 aaKnown RBP3.84□□□□□ -1.79
TRAPPC13-208ENST00000505553 APBB2Q92870 758 aa3.84□□□□□ -1.79
TRAPPC13-208ENST00000505553 DNASE1L2Q92874 299 aa3.84□□□□□ -1.79
TRAPPC13-208ENST00000505553 TEKT1Q969V4 418 aa3.84□□□□□ -1.79
TRAPPC13-208ENST00000505553 ERGIC1Q969X5 290 aa3.84□□□□□ -1.79
TRAPPC13-208ENST00000505553 SLAMF9Q96A28 289 aa3.84□□□□□ -1.79
TRAPPC13-208ENST00000505553 SH2D3AQ9BRG2 576 aa3.84□□□□□ -1.79
TRAPPC13-208ENST00000505553 MSTO1Q9BUK6 570 aa3.84□□□□□ -1.79
TRAPPC13-208ENST00000505553 SLC5A7Q9GZV3 580 aa3.84□□□□□ -1.79
TRAPPC13-208ENST00000505553 WNT5BQ9H1J7 359 aa3.84□□□□□ -1.79
TRAPPC13-208ENST00000505553 TNMDQ9H2S6 317 aa3.84□□□□□ -1.79
TRAPPC13-208ENST00000505553 ASB6Q9NWX5 421 aa3.84□□□□□ -1.79
TRAPPC13-208ENST00000505553 SEPT10Q9P0V9 454 aa3.84□□□□□ -1.79
TRAPPC13-208ENST00000505553 TLK1Q9UKI8 766 aa3.84□□□□□ -1.79
TRAPPC13-208ENST00000505553 ITGA11Q9UKX5 1188 aa3.84□□□□□ -1.79
TRAPPC13-208ENST00000505553 AGTPBP1Q9UPW5 1226 aa3.84□□□□□ -1.79
TRAPPC13-208ENST00000505553 KAT6AQ92794 2004 aa3.84□□□□□ -1.8
TRAPPC13-208ENST00000505553 SPAG9O60271 1321 aaKnown RBP3.83□□□□□ -1.8
TRAPPC13-208ENST00000505553 CCDC69A6NI79 296 aa3.83□□□□□ -1.8
TRAPPC13-208ENST00000505553 EGFP01133 1207 aa3.83□□□□□ -1.8
TRAPPC13-208ENST00000505553 KLKB1P03952 638 aa3.83□□□□□ -1.8
TRAPPC13-208ENST00000505553 NHLRC4P0CG21 123 aaPredicted RBP3.83□□□□□ -1.8
TRAPPC13-208ENST00000505553 EEF2P13639 858 aaKnown RBP3.83□□□□□ -1.8
TRAPPC13-208ENST00000505553 P4HA1P13674 534 aa3.83□□□□□ -1.8
TRAPPC13-208ENST00000505553 HOXB6P17509 224 aaKnown RBP3.83□□□□□ -1.8
TRAPPC13-208ENST00000505553 DESP17661 470 aa3.83□□□□□ -1.8
TRAPPC13-208ENST00000505553 NMBRP28336 390 aa3.83□□□□□ -1.8
TRAPPC13-208ENST00000505553 CRKLP46109 303 aaKnown RBP3.83□□□□□ -1.8
TRAPPC13-208ENST00000505553 PPP3CCP48454 512 aa3.83□□□□□ -1.8
TRAPPC13-208ENST00000505553 SNRPEP62304 92 aaKnown RBP3.83□□□□□ -1.8
TRAPPC13-208ENST00000505553 CSNK2A1P68400 391 aaPredicted RBP3.83□□□□□ -1.8
TRAPPC13-208ENST00000505553 ADORA2A-AS1P86434 159 aa3.83□□□□□ -1.8
TRAPPC13-208ENST00000505553 CDK3Q00526 305 aa3.83□□□□□ -1.8
TRAPPC13-208ENST00000505553 GHRHRQ02643 423 aa3.83□□□□□ -1.8
TRAPPC13-208ENST00000505553 CFHR1Q03591 330 aa3.83□□□□□ -1.8
TRAPPC13-208ENST00000505553 FOXM1Q08050 763 aa3.83□□□□□ -1.8
TRAPPC13-208ENST00000505553 UGCGQ16739 394 aa3.83□□□□□ -1.8
TRAPPC13-208ENST00000505553 SMTNL2Q2TAL5 461 aa3.83□□□□□ -1.8
TRAPPC13-208ENST00000505553 MYLK3Q32MK0 819 aa3.83□□□□□ -1.8
TRAPPC13-208ENST00000505553 KBTBD12Q3ZCT8 623 aa3.83□□□□□ -1.8
TRAPPC13-208ENST00000505553 NSUN5P2Q63ZY6 315 aa3.83□□□□□ -1.8
TRAPPC13-208ENST00000505553 C15orf39Q6ZRI6 1047 aa3.83□□□□□ -1.8
TRAPPC13-208ENST00000505553 ZNF595Q8IYB9 648 aa3.83□□□□□ -1.8
TRAPPC13-208ENST00000505553 DSELQ8IZU8 1212 aa3.83□□□□□ -1.8
TRAPPC13-208ENST00000505553 SLC44A5Q8NCS7 719 aa3.83□□□□□ -1.8
TRAPPC13-208ENST00000505553 PAPD5Q8NDF8 572 aaKnown RBP3.83□□□□□ -1.8
TRAPPC13-208ENST00000505553 CSNK2A3Q8NEV1 391 aa3.83□□□□□ -1.8
TRAPPC13-208ENST00000505553 OR7G3Q8NG95 312 aa3.83□□□□□ -1.8
TRAPPC13-208ENST00000505553 BBS10Q8TAM1 723 aa3.83□□□□□ -1.8
TRAPPC13-208ENST00000505553 WDR20Q8TBZ3 569 aa3.83□□□□□ -1.8
TRAPPC13-208ENST00000505553 EME1Q96AY2 570 aa3.83□□□□□ -1.8
TRAPPC13-208ENST00000505553 FAM118BQ9BPY3 351 aa3.83□□□□□ -1.8
TRAPPC13-208ENST00000505553 SPXQ9BT56 116 aa3.83□□□□□ -1.8
TRAPPC13-208ENST00000505553 FSD1Q9BTV5 496 aa3.83□□□□□ -1.8
TRAPPC13-208ENST00000505553 SEZ6LQ9BYH1 1024 aa3.83□□□□□ -1.8
TRAPPC13-208ENST00000505553 R3HDMLQ9H3Y0 253 aa3.83□□□□□ -1.8
TRAPPC13-208ENST00000505553 TMEM206Q9H813 350 aa3.83□□□□□ -1.8
TRAPPC13-208ENST00000505553 TUFT1Q9NNX1 390 aa3.83□□□□□ -1.8
TRAPPC13-208ENST00000505553 THSD1Q9NS62 852 aa3.83□□□□□ -1.8
TRAPPC13-208ENST00000505553 DPP3Q9NY33 737 aa3.83□□□□□ -1.8
TRAPPC13-208ENST00000505553 AKAP7Q9P0M2 348 aaPredicted RBP3.83□□□□□ -1.8
TRAPPC13-208ENST00000505553 KLHL13Q9P2N7 655 aa3.83□□□□□ -1.8
TRAPPC13-208ENST00000505553 SLC9A2Q9UBY0 812 aa3.83□□□□□ -1.8
TRAPPC13-208ENST00000505553 TMEM184BQ9Y519 407 aaPredicted RBP3.83□□□□□ -1.8
TRAPPC13-208ENST00000505553 ASTN2O75129 1339 aaPredicted RBP3.82□□□□□ -1.8
TRAPPC13-208ENST00000505553 WDR17Q8IZU2 1322 aa3.82□□□□□ -1.8
TRAPPC13-208ENST00000505553 TRIM77I1YAP6 450 aa3.82□□□□□ -1.8
TRAPPC13-208ENST00000505553 CLDN4O14493 209 aa3.82□□□□□ -1.8
TRAPPC13-208ENST00000505553 HS3ST1O14792 307 aa3.82□□□□□ -1.8
TRAPPC13-208ENST00000505553 WNT9BO14905 357 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms