RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 DENND4AQ7Z401 1863 aa21.72■■□□□ 1.07
PTPN13-205ENST00000502971 PLXNB3Q9ULL4 1909 aa21.72■■□□□ 1.07
PTPN13-205ENST00000502971 H0Y858 1186 aa21.72■■□□□ 1.07
PTPN13-205ENST00000502971 UBFD1O14562 309 aaKnown RBP21.72■■□□□ 1.07
PTPN13-205ENST00000502971 SNX2O60749 519 aa21.72■■□□□ 1.07
PTPN13-205ENST00000502971 TBX10O75333 385 aa21.72■■□□□ 1.07
PTPN13-205ENST00000502971 SIX3O95343 332 aaPredicted RBP21.72■■□□□ 1.07
PTPN13-205ENST00000502971 ENO1P06733 434 aaKnown RBP21.72■■□□□ 1.07
PTPN13-205ENST00000502971 OR56A5P0C7T3 313 aa21.72■■□□□ 1.07
PTPN13-205ENST00000502971 CBSLP0DN79 551 aa21.72■■□□□ 1.07
PTPN13-205ENST00000502971 NCF2P19878 526 aaPredicted RBP21.72■■□□□ 1.07
PTPN13-205ENST00000502971 EEF1DP29692 281 aaKnown RBP21.72■■□□□ 1.07
PTPN13-205ENST00000502971 CBSP35520 551 aa21.72■■□□□ 1.07
PTPN13-205ENST00000502971 MTHFRP42898 656 aa21.72■■□□□ 1.07
PTPN13-205ENST00000502971 B4GALNT1Q00973 533 aa21.72■■□□□ 1.07
PTPN13-205ENST00000502971 PDCD2Q16342 344 aaPredicted RBP21.72■■□□□ 1.07
PTPN13-205ENST00000502971 ANKS6Q68DC2 871 aa21.72■■□□□ 1.07
PTPN13-205ENST00000502971 PARM1Q6UWI2 310 aa21.72■■□□□ 1.07
PTPN13-205ENST00000502971 NUDT18Q6ZVK8 323 aa21.72■■□□□ 1.07
PTPN13-205ENST00000502971 Q6ZVL8 140 aa21.72■■□□□ 1.07
PTPN13-205ENST00000502971 RPS27LQ71UM5 84 aaKnown RBP21.72■■□□□ 1.07
PTPN13-205ENST00000502971 SUGP1Q8IWZ8 645 aaKnown RBP21.72■■□□□ 1.07
PTPN13-205ENST00000502971 NRSN1Q8IZ57 195 aa21.72■■□□□ 1.07
PTPN13-205ENST00000502971 SUSD6Q92537 303 aa21.72■■□□□ 1.07
PTPN13-205ENST00000502971 PPP1R16AQ96I34 528 aa21.72■■□□□ 1.07
PTPN13-205ENST00000502971 FAM161BQ96MY7 647 aa21.72■■□□□ 1.07
PTPN13-205ENST00000502971 BTBD10Q9BSF8 475 aa21.72■■□□□ 1.07
PTPN13-205ENST00000502971 ZSCAN5AQ9BUG6 496 aa21.72■■□□□ 1.07
PTPN13-205ENST00000502971 WDR55Q9H6Y2 383 aaPredicted RBP21.72■■□□□ 1.07
PTPN13-205ENST00000502971 KCTD5Q9NXV2 234 aa21.72■■□□□ 1.07
PTPN13-205ENST00000502971 SUN2Q9UH99 717 aa21.72■■□□□ 1.07
PTPN13-205ENST00000502971 TMPRSS11EQ9UL52 423 aa21.72■■□□□ 1.07
PTPN13-205ENST00000502971 TRAF6Q9Y4K3 522 aa21.72■■□□□ 1.07
PTPN13-205ENST00000502971 KAT7O95251 611 aa21.71■■□□□ 1.07
PTPN13-205ENST00000502971 RPS17P08708 135 aaKnown RBP21.71■■□□□ 1.07
PTPN13-205ENST00000502971 KRT16P08779 473 aa21.71■■□□□ 1.07
PTPN13-205ENST00000502971 ELFN1P0C7U0 828 aa21.71■■□□□ 1.07
PTPN13-205ENST00000502971 GDI1P31150 447 aa21.71■■□□□ 1.07
PTPN13-205ENST00000502971 ETV3P41162 512 aa21.71■■□□□ 1.07
PTPN13-205ENST00000502971 GRIA2P42262 883 aa21.71■■□□□ 1.07
PTPN13-205ENST00000502971 ELF3P78545 371 aaPredicted RBP21.71■■□□□ 1.07
PTPN13-205ENST00000502971 ELP6Q0PNE2 266 aa21.71■■□□□ 1.07
PTPN13-205ENST00000502971 LSM12Q3MHD2 195 aaKnown RBP21.71■■□□□ 1.07
PTPN13-205ENST00000502971 ITPRIPL2Q3MIP1 535 aa21.71■■□□□ 1.07
PTPN13-205ENST00000502971 POM121L1PQ3SYA9 428 aa21.71■■□□□ 1.07
PTPN13-205ENST00000502971 HENMT1Q5T8I9 393 aaKnown RBP21.71■■□□□ 1.07
PTPN13-205ENST00000502971 LIPIQ6XZB0 460 aa21.71■■□□□ 1.07
PTPN13-205ENST00000502971 DCUN1D1Q96GG9 259 aa21.71■■□□□ 1.07
PTPN13-205ENST00000502971 MSLNLQ96KJ4 702 aa21.71■■□□□ 1.07
PTPN13-205ENST00000502971 FAM129BQ96TA1 746 aa21.71■■□□□ 1.07
PTPN13-205ENST00000502971 GOLGA8QA0A0J9YX86 632 aa21.7■■□□□ 1.06
PTPN13-205ENST00000502971 GOLGA8OA6NCC3 632 aa21.7■■□□□ 1.06
PTPN13-205ENST00000502971 TMEM233B4DJY2 109 aa21.7■■□□□ 1.06
PTPN13-205ENST00000502971 CFAP99D6REC4 459 aa21.7■■□□□ 1.06
PTPN13-205ENST00000502971 E9PBE3 544 aa21.7■■□□□ 1.06
PTPN13-205ENST00000502971 GOLGA8NF8WBI6 632 aa21.7■■□□□ 1.06
PTPN13-205ENST00000502971 EIF3FO00303 357 aaPredicted RBP21.7■■□□□ 1.06
PTPN13-205ENST00000502971 NEMP1O14524 444 aa21.7■■□□□ 1.06
PTPN13-205ENST00000502971 KLHL41O60662 606 aa21.7■■□□□ 1.06
PTPN13-205ENST00000502971 FGF4P08620 206 aa21.7■■□□□ 1.06
PTPN13-205ENST00000502971 EPHA3P29320 983 aa21.7■■□□□ 1.06
PTPN13-205ENST00000502971 LTBRP36941 435 aa21.7■■□□□ 1.06
PTPN13-205ENST00000502971 HK3P52790 923 aa21.7■■□□□ 1.06
PTPN13-205ENST00000502971 TGFBIQ15582 683 aa21.7■■□□□ 1.06
PTPN13-205ENST00000502971 ZNF284Q2VY69 593 aa21.7■■□□□ 1.06
PTPN13-205ENST00000502971 NAIF1Q69YI7 327 aaPredicted RBP21.7■■□□□ 1.06
PTPN13-205ENST00000502971 DSG4Q86SJ6 1040 aa21.7■■□□□ 1.06
PTPN13-205ENST00000502971 SFTPA1Q8IWL2 248 aa21.7■■□□□ 1.06
PTPN13-205ENST00000502971 CLYBLQ8N0X4 340 aa21.7■■□□□ 1.06
PTPN13-205ENST00000502971 FGF14Q92915 247 aa21.7■■□□□ 1.06
PTPN13-205ENST00000502971 SCAMP4Q969E2 229 aa21.7■■□□□ 1.06
PTPN13-205ENST00000502971 ARRDC3Q96B67 414 aa21.7■■□□□ 1.06
PTPN13-205ENST00000502971 TRMT61BQ9BVS5 477 aaKnown RBP21.7■■□□□ 1.06
PTPN13-205ENST00000502971 TBC1D10AQ9BXI6 508 aa21.7■■□□□ 1.06
PTPN13-205ENST00000502971 MEAF6Q9HAF1 191 aa21.7■■□□□ 1.06
PTPN13-205ENST00000502971 CD274Q9NZQ7 290 aa21.7■■□□□ 1.06
PTPN13-205ENST00000502971 SPECC1L-ADORA2AF8WAN1 911 aa21.69■■□□□ 1.06
PTPN13-205ENST00000502971 APODP05090 189 aa21.69■■□□□ 1.06
PTPN13-205ENST00000502971 ATP1B2P14415 290 aaPredicted RBP21.69■■□□□ 1.06
PTPN13-205ENST00000502971 PRDX6P30041 224 aa21.69■■□□□ 1.06
PTPN13-205ENST00000502971 INHBCP55103 352 aa21.69■■□□□ 1.06
PTPN13-205ENST00000502971 CDH13P55290 713 aa21.69■■□□□ 1.06
PTPN13-205ENST00000502971 CLCQ05315 142 aa21.69■■□□□ 1.06
PTPN13-205ENST00000502971 DLX2Q07687 328 aaPredicted RBP21.69■■□□□ 1.06
PTPN13-205ENST00000502971 ACSBG2Q5FVE4 666 aa21.69■■□□□ 1.06
PTPN13-205ENST00000502971 FBXW10Q5XX13 1052 aa21.69■■□□□ 1.06
PTPN13-205ENST00000502971 CYB5D1Q6P9G0 228 aa21.69■■□□□ 1.06
PTPN13-205ENST00000502971 FBXL19Q6PCT2 694 aa21.69■■□□□ 1.06
PTPN13-205ENST00000502971 SBSNQ6UWP8 590 aa21.69■■□□□ 1.06
PTPN13-205ENST00000502971 FRA10AC1Q70Z53 315 aa21.69■■□□□ 1.06
PTPN13-205ENST00000502971 NAT14Q8WUY8 206 aa21.69■■□□□ 1.06
PTPN13-205ENST00000502971 NECTIN4Q96NY8 510 aa21.69■■□□□ 1.06
PTPN13-205ENST00000502971 RIOK2Q9BVS4 552 aaKnown RBP21.69■■□□□ 1.06
PTPN13-205ENST00000502971 FAM126AQ9BYI3 521 aaPredicted RBP21.69■■□□□ 1.06
PTPN13-205ENST00000502971 TNFRSF12AQ9NP84 129 aa21.69■■□□□ 1.06
PTPN13-205ENST00000502971 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.69■■□□□ 1.06
PTPN13-205ENST00000502971 PLXNA2O75051 1894 aa21.69■■□□□ 1.06
PTPN13-205ENST00000502971 LRRC14BA6NHZ5 514 aa21.69■■□□□ 1.06
PTPN13-205ENST00000502971 SDHDO14521 159 aa21.69■■□□□ 1.06
PTPN13-205ENST00000502971 CDK14O94921 469 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms