RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 AASDHPPTQ9NRN7 309 aa17.06■□□□□ 0.32
HMGXB3-201ENST00000502717 TRPM5Q9NZQ8 1165 aa17.06■□□□□ 0.32
HMGXB3-201ENST00000502717 PCDHGA10Q9Y5H3 936 aa17.06■□□□□ 0.32
HMGXB3-201ENST00000502717 NPEPPSL1A6NEC2 478 aa17.06■□□□□ 0.32
HMGXB3-201ENST00000502717 ZNF487B1APH4 448 aa17.06■□□□□ 0.32
HMGXB3-201ENST00000502717 PRMT5O14744 637 aaPredicted RBP17.06■□□□□ 0.32
HMGXB3-201ENST00000502717 OR56A5P0C7T3 313 aa17.06■□□□□ 0.32
HMGXB3-201ENST00000502717 GCAP28676 217 aa17.06■□□□□ 0.32
HMGXB3-201ENST00000502717 ATXN1P54253 815 aaKnown RBP17.06■□□□□ 0.32
HMGXB3-201ENST00000502717 IRF8Q02556 426 aa17.06■□□□□ 0.32
HMGXB3-201ENST00000502717 FGD2Q7Z6J4 655 aa17.06■□□□□ 0.32
HMGXB3-201ENST00000502717 PLD6Q8N2A8 252 aaKnown RBP17.06■□□□□ 0.32
HMGXB3-201ENST00000502717 FIBCD1Q8N539 461 aa17.06■□□□□ 0.32
HMGXB3-201ENST00000502717 REPS1Q96D71 796 aa17.06■□□□□ 0.32
HMGXB3-201ENST00000502717 RNF19AQ9NV58 838 aa17.06■□□□□ 0.32
HMGXB3-201ENST00000502717 ST14Q9Y5Y6 855 aa17.06■□□□□ 0.32
HMGXB3-201ENST00000502717 CRYBG1Q9Y4K1 1723 aa17.06■□□□□ 0.32
HMGXB3-201ENST00000502717 GPR25O00155 361 aa17.06■□□□□ 0.32
HMGXB3-201ENST00000502717 ZBTB14O43829 449 aa17.06■□□□□ 0.32
HMGXB3-201ENST00000502717 ONECUT3O60422 494 aaPredicted RBP17.06■□□□□ 0.32
HMGXB3-201ENST00000502717 NOS1APO75052 506 aaPredicted RBP17.06■□□□□ 0.32
HMGXB3-201ENST00000502717 HLCSP50747 726 aa17.06■□□□□ 0.32
HMGXB3-201ENST00000502717 ACLYP53396 1101 aa17.06■□□□□ 0.32
HMGXB3-201ENST00000502717 ERVK-8P63133 956 aa17.06■□□□□ 0.32
HMGXB3-201ENST00000502717 ZDHHC21Q8IVQ6 265 aa17.06■□□□□ 0.32
HMGXB3-201ENST00000502717 DNAJB3Q8WWF6 145 aa17.06■□□□□ 0.32
HMGXB3-201ENST00000502717 HDAC2Q92769 488 aaKnown RBP17.06■□□□□ 0.32
HMGXB3-201ENST00000502717 RDH12Q96NR8 316 aa17.06■□□□□ 0.32
HMGXB3-201ENST00000502717 LRTM1Q9HBL6 345 aa17.06■□□□□ 0.32
HMGXB3-201ENST00000502717 AHSPQ9NZD4 102 aa17.06■□□□□ 0.32
HMGXB3-201ENST00000502717 MATN3O15232 486 aa17.06■□□□□ 0.32
HMGXB3-201ENST00000502717 YWHAQP27348 245 aa17.06■□□□□ 0.32
HMGXB3-201ENST00000502717 STARD3Q14849 445 aa17.06■□□□□ 0.32
HMGXB3-201ENST00000502717 ARMC6Q6NXE6 501 aa17.06■□□□□ 0.32
HMGXB3-201ENST00000502717 FAM35AQ86V20 835 aa17.06■□□□□ 0.32
HMGXB3-201ENST00000502717 HASPINQ8TF76 798 aa17.06■□□□□ 0.32
HMGXB3-201ENST00000502717 CDK5RAP1Q96SZ6 601 aaKnown RBP17.06■□□□□ 0.32
HMGXB3-201ENST00000502717 CLIC3O95833 236 aa17.05■□□□□ 0.32
HMGXB3-201ENST00000502717 DHFRP00374 187 aa17.05■□□□□ 0.32
HMGXB3-201ENST00000502717 BLVRAP53004 296 aa17.05■□□□□ 0.32
HMGXB3-201ENST00000502717 SMIM11AP58511 58 aa17.05■□□□□ 0.32
HMGXB3-201ENST00000502717 MTPNP58546 118 aa17.05■□□□□ 0.32
HMGXB3-201ENST00000502717 PRR23CQ6ZRP0 262 aa17.05■□□□□ 0.32
HMGXB3-201ENST00000502717 GAB3Q8WWW8 586 aa17.05■□□□□ 0.32
HMGXB3-201ENST00000502717 SLC25A51Q9H1U9 297 aa17.05■□□□□ 0.32
HMGXB3-201ENST00000502717 RASAL1O95294 804 aa17.05■□□□□ 0.32
HMGXB3-201ENST00000502717 MT-CYBP00156 380 aaPredicted RBP17.05■□□□□ 0.32
HMGXB3-201ENST00000502717 PIRTP0C851 137 aa17.05■□□□□ 0.32
HMGXB3-201ENST00000502717 PKMP14618 531 aaKnown RBP17.05■□□□□ 0.32
HMGXB3-201ENST00000502717 CTXN3Q4LDR2 81 aa17.05■□□□□ 0.32
HMGXB3-201ENST00000502717 LGI2Q8N0V4 545 aa17.05■□□□□ 0.32
HMGXB3-201ENST00000502717 SLC34A3Q8N130 599 aa17.05■□□□□ 0.32
HMGXB3-201ENST00000502717 GOLM1Q8NBJ4 401 aa17.05■□□□□ 0.32
HMGXB3-201ENST00000502717 DIRAS2Q96HU8 199 aa17.05■□□□□ 0.32
HMGXB3-201ENST00000502717 TPK1Q9H3S4 243 aa17.05■□□□□ 0.32
HMGXB3-201ENST00000502717 KAT6AQ92794 2004 aa17.05■□□□□ 0.32
HMGXB3-201ENST00000502717 SMYD5Q6GMV2 418 aa17.05■□□□□ 0.32
HMGXB3-201ENST00000502717 GLB1L3Q8NCI6 653 aaPredicted RBP17.05■□□□□ 0.32
HMGXB3-201ENST00000502717 OR9I1Q8NGQ6 314 aa17.05■□□□□ 0.32
HMGXB3-201ENST00000502717 RGPD5Q99666 1765 aa17.05■□□□□ 0.32
HMGXB3-201ENST00000502717 TIAM2Q8IVF5 1701 aa17.05■□□□□ 0.32
HMGXB3-201ENST00000502717 PCSK2P16519 638 aa17.05■□□□□ 0.32
HMGXB3-201ENST00000502717 GLDCP23378 1020 aa17.05■□□□□ 0.32
HMGXB3-201ENST00000502717 PRMT2P55345 433 aa17.05■□□□□ 0.32
HMGXB3-201ENST00000502717 DNAJB13P59910 316 aa17.05■□□□□ 0.32
HMGXB3-201ENST00000502717 CPSF6Q16630 551 aaKnown RBP eCLIP17.05■□□□□ 0.32
HMGXB3-201ENST00000502717 CCDC157Q569K6 752 aa17.05■□□□□ 0.32
HMGXB3-201ENST00000502717 DMRTB1Q96MA1 342 aa17.05■□□□□ 0.32
HMGXB3-201ENST00000502717 RPF2Q9H7B2 306 aaKnown RBP17.05■□□□□ 0.32
HMGXB3-201ENST00000502717 TOR4AQ9NXH8 423 aa17.05■□□□□ 0.32
HMGXB3-201ENST00000502717 KLHL28Q9NXS3 571 aa17.05■□□□□ 0.32
HMGXB3-201ENST00000502717 ZNHIT2Q9UHR6 403 aa17.05■□□□□ 0.32
HMGXB3-201ENST00000502717 ANGPT4Q9Y264 503 aa17.05■□□□□ 0.32
HMGXB3-201ENST00000502717 STYXL1Q9Y6J8 313 aa17.05■□□□□ 0.32
HMGXB3-201ENST00000502717 BHMG1C9JSJ3 638 aaPredicted RBP17.04■□□□□ 0.32
HMGXB3-201ENST00000502717 AHSGP02765 367 aa17.04■□□□□ 0.32
HMGXB3-201ENST00000502717 FMO3P31513 532 aa17.04■□□□□ 0.32
HMGXB3-201ENST00000502717 ADCYAP1R1P41586 468 aa17.04■□□□□ 0.32
HMGXB3-201ENST00000502717 MYBPC1Q00872 1141 aa17.04■□□□□ 0.32
HMGXB3-201ENST00000502717 R3HCC1LQ7Z5L2 792 aaKnown RBP17.04■□□□□ 0.32
HMGXB3-201ENST00000502717 CARNMT1Q8N4J0 409 aa17.04■□□□□ 0.32
HMGXB3-201ENST00000502717 SLC13A3Q8WWT9 602 aa17.04■□□□□ 0.32
HMGXB3-201ENST00000502717 NDRG1Q92597 394 aaKnown RBP17.04■□□□□ 0.32
HMGXB3-201ENST00000502717 BIRC7Q96CA5 298 aa17.04■□□□□ 0.32
HMGXB3-201ENST00000502717 MRPL48Q96GC5 212 aaKnown RBP17.04■□□□□ 0.32
HMGXB3-201ENST00000502717 PEBP4Q96S96 227 aa17.04■□□□□ 0.32
HMGXB3-201ENST00000502717 ANKRD60Q9BZ19 345 aa17.04■□□□□ 0.32
HMGXB3-201ENST00000502717 TRPC4Q9UBN4 977 aa17.04■□□□□ 0.32
HMGXB3-201ENST00000502717 CDC14AQ9UNH5 594 aa17.04■□□□□ 0.32
HMGXB3-201ENST00000502717 CFL2Q9Y281 166 aa17.04■□□□□ 0.32
HMGXB3-201ENST00000502717 PCDHB5Q9Y5E4 795 aa17.04■□□□□ 0.32
HMGXB3-201ENST00000502717 A0A1W2PP18 115 aa17.04■□□□□ 0.32
HMGXB3-201ENST00000502717 PAGE1O75459 146 aa17.04■□□□□ 0.32
HMGXB3-201ENST00000502717 CAMK2GQ13555 558 aaPredicted RBP17.04■□□□□ 0.32
HMGXB3-201ENST00000502717 CTC1Q2NKJ3 1217 aa17.04■□□□□ 0.32
HMGXB3-201ENST00000502717 C16orf62Q7Z3J2 963 aa17.04■□□□□ 0.32
HMGXB3-201ENST00000502717 LDB1Q86U70 411 aaPredicted RBP17.04■□□□□ 0.32
HMGXB3-201ENST00000502717 AMIGO3Q86WK7 504 aa17.04■□□□□ 0.32
HMGXB3-201ENST00000502717 DNAJB8Q8NHS0 232 aa17.04■□□□□ 0.32
HMGXB3-201ENST00000502717 PIH1D2Q8WWB5 315 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms