RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 TLE1Q04724 770 aa18.23■□□□□ 0.51
PRKCB-209ENST00000498058 ABHD18Q0P651 414 aa18.23■□□□□ 0.51
PRKCB-209ENST00000498058 CDC20Q12834 499 aa18.23■□□□□ 0.51
PRKCB-209ENST00000498058 PRKD1Q15139 912 aaPredicted RBP18.23■□□□□ 0.51
PRKCB-209ENST00000498058 TCEAL1Q15170 157 aa18.23■□□□□ 0.51
PRKCB-209ENST00000498058 ATP13A5Q4VNC0 1218 aa18.23■□□□□ 0.51
PRKCB-209ENST00000498058 TEX44Q53QW1 395 aa18.23■□□□□ 0.51
PRKCB-209ENST00000498058 KDELC1Q6UW63 502 aa18.23■□□□□ 0.51
PRKCB-209ENST00000498058 ABRAXAS1Q6UWZ7 409 aa18.23■□□□□ 0.51
PRKCB-209ENST00000498058 LRRTM4Q86VH4 590 aa18.23■□□□□ 0.51
PRKCB-209ENST00000498058 PLXDC1Q8IUK5 500 aa18.23■□□□□ 0.51
PRKCB-209ENST00000498058 RSC1A1Q92681 617 aa18.23■□□□□ 0.51
PRKCB-209ENST00000498058 TEKT5Q96M29 485 aa18.23■□□□□ 0.51
PRKCB-209ENST00000498058 TGM7Q96PF1 710 aa18.23■□□□□ 0.51
PRKCB-209ENST00000498058 ZPBPQ9BS86 351 aa18.23■□□□□ 0.51
PRKCB-209ENST00000498058 EPB41L1Q9H4G0 881 aa18.23■□□□□ 0.51
PRKCB-209ENST00000498058 TRIM10Q9UDY6 481 aa18.23■□□□□ 0.51
PRKCB-209ENST00000498058 COL12A1Q99715 3063 aa18.23■□□□□ 0.51
PRKCB-209ENST00000498058 GOLGA6L9A6NEM1 432 aa18.22■□□□□ 0.51
PRKCB-209ENST00000498058 GPR89AB7ZAQ6 455 aa18.22■□□□□ 0.51
PRKCB-209ENST00000498058 PPP1R12AO14974 1030 aaPredicted RBP18.22■□□□□ 0.51
PRKCB-209ENST00000498058 KMOO15229 486 aa18.22■□□□□ 0.51
PRKCB-209ENST00000498058 CAPN5O15484 640 aaPredicted RBP18.22■□□□□ 0.51
PRKCB-209ENST00000498058 UBXN7O94888 489 aa18.22■□□□□ 0.51
PRKCB-209ENST00000498058 CDK14O94921 469 aa18.22■□□□□ 0.51
PRKCB-209ENST00000498058 VIPP01282 170 aa18.22■□□□□ 0.51
PRKCB-209ENST00000498058 GPR89BP0CG08 455 aa18.22■□□□□ 0.51
PRKCB-209ENST00000498058 TNNT1P13805 278 aa18.22■□□□□ 0.51
PRKCB-209ENST00000498058 STAT5AP42229 794 aa18.22■□□□□ 0.51
PRKCB-209ENST00000498058 ARHGAP25P42331 645 aa18.22■□□□□ 0.51
PRKCB-209ENST00000498058 CHRNA4P43681 627 aa18.22■□□□□ 0.51
PRKCB-209ENST00000498058 CCR10P46092 362 aa18.22■□□□□ 0.51
PRKCB-209ENST00000498058 DRG2P55039 364 aaKnown RBP18.22■□□□□ 0.51
PRKCB-209ENST00000498058 PPP1CAP62136 330 aa18.22■□□□□ 0.51
PRKCB-209ENST00000498058 WASHC5Q12768 1159 aa18.22■□□□□ 0.51
PRKCB-209ENST00000498058 SLC14A2Q15849 920 aa18.22■□□□□ 0.51
PRKCB-209ENST00000498058 TAZQ16635 292 aa18.22■□□□□ 0.51
PRKCB-209ENST00000498058 LRRC38Q5VT99 294 aa18.22■□□□□ 0.51
PRKCB-209ENST00000498058 PDPK2PQ6A1A2 396 aa18.22■□□□□ 0.51
PRKCB-209ENST00000498058 ZNF662Q6ZS27 426 aa18.22■□□□□ 0.51
PRKCB-209ENST00000498058 TTC30BQ8N4P2 665 aa18.22■□□□□ 0.51
PRKCB-209ENST00000498058 TIMM29Q9BSF4 260 aa18.22■□□□□ 0.51
PRKCB-209ENST00000498058 MAK16Q9BXY0 300 aaKnown RBP18.22■□□□□ 0.51
PRKCB-209ENST00000498058 LOC285095A0A1B0GVY8 99 aa18.21■□□□□ 0.51
PRKCB-209ENST00000498058 PDZK1P1A8MUH7 402 aa18.21■□□□□ 0.51
PRKCB-209ENST00000498058 F5H423 210 aaPredicted RBP18.21■□□□□ 0.51
PRKCB-209ENST00000498058 COMTP21964 271 aa18.21■□□□□ 0.51
PRKCB-209ENST00000498058 CDKN2BP42772 138 aa18.21■□□□□ 0.51
PRKCB-209ENST00000498058 NAP1L1P55209 391 aaKnown RBP18.21■□□□□ 0.51
PRKCB-209ENST00000498058 FOXM1Q08050 763 aa18.21■□□□□ 0.51
PRKCB-209ENST00000498058 GPR18Q14330 331 aa18.21■□□□□ 0.51
PRKCB-209ENST00000498058 DEFB109BQ30KR1 87 aa18.21■□□□□ 0.51
PRKCB-209ENST00000498058 STARD8Q92502 1023 aa18.21■□□□□ 0.51
PRKCB-209ENST00000498058 CATSPER2Q96P56 530 aa18.21■□□□□ 0.51
PRKCB-209ENST00000498058 VPS35Q96QK1 796 aa18.21■□□□□ 0.51
PRKCB-209ENST00000498058 EPN3Q9H201 632 aa18.21■□□□□ 0.51
PRKCB-209ENST00000498058 SLC40A1Q9NP59 571 aa18.21■□□□□ 0.51
PRKCB-209ENST00000498058 ZNF71Q9NQZ8 489 aaPredicted RBP18.21■□□□□ 0.51
PRKCB-209ENST00000498058 RAD18Q9NS91 495 aa18.21■□□□□ 0.51
PRKCB-209ENST00000498058 TUBD1Q9UJT1 453 aa18.21■□□□□ 0.51
PRKCB-209ENST00000498058 RPS6KL1Q9Y6S9 549 aa18.21■□□□□ 0.51
PRKCB-209ENST00000498058 PTPN13Q12923 2485 aa18.2■□□□□ 0.5
PRKCB-209ENST00000498058 VEGFDO43915 354 aa18.2■□□□□ 0.5
PRKCB-209ENST00000498058 UGT1A9O60656 530 aa18.2■□□□□ 0.5
PRKCB-209ENST00000498058 FURINP09958 794 aa18.2■□□□□ 0.5
PRKCB-209ENST00000498058 ZFXP17010 805 aaPredicted RBP18.2■□□□□ 0.5
PRKCB-209ENST00000498058 AMD1P17707 334 aa18.2■□□□□ 0.5
PRKCB-209ENST00000498058 UGT1A6P19224 532 aa18.2■□□□□ 0.5
PRKCB-209ENST00000498058 NFKB1P19838 968 aa18.2■□□□□ 0.5
PRKCB-209ENST00000498058 UGT1A1P22309 533 aa18.2■□□□□ 0.5
PRKCB-209ENST00000498058 UGT1A4P22310 534 aa18.2■□□□□ 0.5
PRKCB-209ENST00000498058 CTSCP53634 463 aa18.2■□□□□ 0.5
PRKCB-209ENST00000498058 HADHBP55084 474 aaKnown RBP18.2■□□□□ 0.5
PRKCB-209ENST00000498058 WNT3AP56704 352 aa18.2■□□□□ 0.5
PRKCB-209ENST00000498058 TMEM115Q12893 351 aaPredicted RBP18.2■□□□□ 0.5
PRKCB-209ENST00000498058 COLEC12Q5KU26 742 aa18.2■□□□□ 0.5
PRKCB-209ENST00000498058 C16orf46Q6P387 395 aa18.2■□□□□ 0.5
PRKCB-209ENST00000498058 WASH2PQ6VEQ5 465 aa18.2■□□□□ 0.5
PRKCB-209ENST00000498058 TRIM48Q8IWZ4 208 aa18.2■□□□□ 0.5
PRKCB-209ENST00000498058 RNF10Q8N5U6 811 aaKnown RBP18.2■□□□□ 0.5
PRKCB-209ENST00000498058 AVL9Q8NBF6 648 aa18.2■□□□□ 0.5
PRKCB-209ENST00000498058 GPR150Q8NGU9 434 aa18.2■□□□□ 0.5
PRKCB-209ENST00000498058 KIAA1143Q96AT1 154 aaPredicted RBP18.2■□□□□ 0.5
PRKCB-209ENST00000498058 OXNAD1Q96HP4 312 aaPredicted RBP18.2■□□□□ 0.5
PRKCB-209ENST00000498058 ELMO2Q96JJ3 720 aa18.2■□□□□ 0.5
PRKCB-209ENST00000498058 MRGPRX2Q96LB1 330 aa18.2■□□□□ 0.5
PRKCB-209ENST00000498058 OR6C1Q96RD1 312 aa18.2■□□□□ 0.5
PRKCB-209ENST00000498058 GOLPH3Q9H4A6 298 aa18.2■□□□□ 0.5
PRKCB-209ENST00000498058 ZNF768Q9H5H4 540 aaKnown RBP18.2■□□□□ 0.5
PRKCB-209ENST00000498058 UGT1A7Q9HAW7 530 aa18.2■□□□□ 0.5
PRKCB-209ENST00000498058 UGT1A10Q9HAW8 530 aa18.2■□□□□ 0.5
PRKCB-209ENST00000498058 UGT1A8Q9HAW9 530 aa18.2■□□□□ 0.5
PRKCB-209ENST00000498058 IL26Q9NPH9 171 aa18.2■□□□□ 0.5
PRKCB-209ENST00000498058 WASH6PQ9NQA3 447 aa18.2■□□□□ 0.5
PRKCB-209ENST00000498058 NBASA2RRP1 2371 aa18.19■□□□□ 0.5
PRKCB-209ENST00000498058 DOPEY2Q9Y3R5 2298 aa18.19■□□□□ 0.5
PRKCB-209ENST00000498058 K7EM74 188 aa18.19■□□□□ 0.5
PRKCB-209ENST00000498058 GAPDHSO14556 408 aaPredicted RBP18.19■□□□□ 0.5
PRKCB-209ENST00000498058 BUD23O43709 281 aaKnown RBP18.19■□□□□ 0.5
PRKCB-209ENST00000498058 HMGCLP35914 325 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms