RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 HGFP14210 728 aa15.11■□□□□ 0.01
NUP50-219ENST00000497960 VCLP18206 1134 aa15.11■□□□□ 0.01
NUP50-219ENST00000497960 ADRA1AP35348 466 aa15.11■□□□□ 0.01
NUP50-219ENST00000497960 COILP38432 576 aaPredicted RBP15.11■□□□□ 0.01
NUP50-219ENST00000497960 TLE3Q04726 772 aa15.11■□□□□ 0.01
NUP50-219ENST00000497960 TMEM115Q12893 351 aaPredicted RBP15.11■□□□□ 0.01
NUP50-219ENST00000497960 NFATC2Q13469 925 aa15.11■□□□□ 0.01
NUP50-219ENST00000497960 SQSTM1Q13501 440 aa15.11■□□□□ 0.01
NUP50-219ENST00000497960 PARP6Q2NL67 630 aa15.11■□□□□ 0.01
NUP50-219ENST00000497960 PLA2G4EQ3MJ16 856 aa15.11■□□□□ 0.01
NUP50-219ENST00000497960 LDLRAP1Q5SW96 308 aa15.11■□□□□ 0.01
NUP50-219ENST00000497960 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.11■□□□□ 0.01
NUP50-219ENST00000497960 NKAIN2Q5VXU1 208 aa15.11■□□□□ 0.01
NUP50-219ENST00000497960 TTC27Q6P3X3 843 aa15.11■□□□□ 0.01
NUP50-219ENST00000497960 TMPRSS9Q7Z410 1059 aa15.11■□□□□ 0.01
NUP50-219ENST00000497960 CLEC14AQ86T13 490 aa15.11■□□□□ 0.01
NUP50-219ENST00000497960 ZNF761Q86XN6 746 aaPredicted RBP15.11■□□□□ 0.01
NUP50-219ENST00000497960 TRAPPC5Q8IUR0 188 aa15.11■□□□□ 0.01
NUP50-219ENST00000497960 TAB3Q8N5C8 712 aaPredicted RBP15.11■□□□□ 0.01
NUP50-219ENST00000497960 TBL1YQ9BQ87 522 aa15.11■□□□□ 0.01
NUP50-219ENST00000497960 NUDT22Q9BRQ3 303 aa15.11■□□□□ 0.01
NUP50-219ENST00000497960 TIMM29Q9BSF4 260 aa15.11■□□□□ 0.01
NUP50-219ENST00000497960 DPH1Q9BZG8 443 aa15.11■□□□□ 0.01
NUP50-219ENST00000497960 DDX47Q9H0S4 455 aaKnown RBP15.11■□□□□ 0.01
NUP50-219ENST00000497960 PRDM8Q9NQV8 689 aa15.11■□□□□ 0.01
NUP50-219ENST00000497960 FEZ2Q9UHY8 353 aaPredicted RBP15.11■□□□□ 0.01
NUP50-219ENST00000497960 TMPRSS11EQ9UL52 423 aa15.11■□□□□ 0.01
NUP50-219ENST00000497960 DRG1Q9Y295 367 aaKnown RBP15.11■□□□□ 0.01
NUP50-219ENST00000497960 DNAJC16Q9Y2G8 782 aa15.11■□□□□ 0.01
NUP50-219ENST00000497960 PCDHGA7Q9Y5G6 932 aa15.11■□□□□ 0.01
NUP50-219ENST00000497960 ARL5AQ9Y689 179 aa15.11■□□□□ 0.01
NUP50-219ENST00000497960 WDFY3Q8IZQ1 3526 aa15.1■□□□□ 0.01
NUP50-219ENST00000497960 A6NCN8 305 aa15.1■□□□□ 0.01
NUP50-219ENST00000497960 PDZK1P1A8MUH7 402 aa15.1■□□□□ 0.01
NUP50-219ENST00000497960 CCDC188H7C350 402 aa15.1■□□□□ 0.01
NUP50-219ENST00000497960 AGRPO00253 132 aa15.1■□□□□ 0.01
NUP50-219ENST00000497960 KLK10O43240 276 aa15.1■□□□□ 0.01
NUP50-219ENST00000497960 DUX1O43812 170 aa15.1■□□□□ 0.01
NUP50-219ENST00000497960 UGT1A9O60656 530 aa15.1■□□□□ 0.01
NUP50-219ENST00000497960 CRTAMO95727 393 aa15.1■□□□□ 0.01
NUP50-219ENST00000497960 UGT1A6P19224 532 aa15.1■□□□□ 0.01
NUP50-219ENST00000497960 UGT1A1P22309 533 aa15.1■□□□□ 0.01
NUP50-219ENST00000497960 UGT1A4P22310 534 aa15.1■□□□□ 0.01
NUP50-219ENST00000497960 UGT1A3P35503 534 aa15.1■□□□□ 0.01
NUP50-219ENST00000497960 PDE1BQ01064 536 aa15.1■□□□□ 0.01
NUP50-219ENST00000497960 TRA2AQ13595 282 aaKnown RBP eCLIP15.1■□□□□ 0.01
NUP50-219ENST00000497960 KHDC1Q4VXA5 237 aaKnown RBP15.1■□□□□ 0.01
NUP50-219ENST00000497960 KLHL7Q8IXQ5 586 aa15.1■□□□□ 0.01
NUP50-219ENST00000497960 OR4D9Q8NGE8 314 aa15.1■□□□□ 0.01
NUP50-219ENST00000497960 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.1■□□□□ 0.01
NUP50-219ENST00000497960 UGT1A7Q9HAW7 530 aa15.1■□□□□ 0.01
NUP50-219ENST00000497960 UGT1A10Q9HAW8 530 aa15.1■□□□□ 0.01
NUP50-219ENST00000497960 UGT1A8Q9HAW9 530 aa15.1■□□□□ 0.01
NUP50-219ENST00000497960 PAK5Q9P286 719 aa15.1■□□□□ 0.01
NUP50-219ENST00000497960 CPNE7Q9UBL6 633 aa15.1■□□□□ 0.01
NUP50-219ENST00000497960 SLC23A2Q9UGH3 650 aa15.1■□□□□ 0.01
NUP50-219ENST00000497960 CDC23Q9UJX2 597 aa15.1■□□□□ 0.01
NUP50-219ENST00000497960 IGHV5-10-1A0A0J9YXX1 117 aa15.09■□□□□ 0.01
NUP50-219ENST00000497960 ESPNB1AK53 854 aa15.09■□□□□ 0.01
NUP50-219ENST00000497960 HGSO14964 777 aaPredicted RBP15.09■□□□□ 0.01
NUP50-219ENST00000497960 KCNJ13O60928 360 aa15.09■□□□□ 0.01
NUP50-219ENST00000497960 PRAMEF1O95521 474 aa15.09■□□□□ 0.01
NUP50-219ENST00000497960 GAS8O95995 478 aa15.09■□□□□ 0.01
NUP50-219ENST00000497960 HOXB3P14651 431 aaPredicted RBP15.09■□□□□ 0.01
NUP50-219ENST00000497960 ETS1P14921 441 aa15.09■□□□□ 0.01
NUP50-219ENST00000497960 IDSP22304 550 aa15.09■□□□□ 0.01
NUP50-219ENST00000497960 SLC5A2P31639 672 aa15.09■□□□□ 0.01
NUP50-219ENST00000497960 FDFT1P37268 417 aa15.09■□□□□ 0.01
NUP50-219ENST00000497960 LIMK2P53671 638 aa15.09■□□□□ 0.01
NUP50-219ENST00000497960 UCNP55089 124 aa15.09■□□□□ 0.01
NUP50-219ENST00000497960 C2orf54Q08AI8 447 aa15.09■□□□□ 0.01
NUP50-219ENST00000497960 OLIG2Q13516 323 aa15.09■□□□□ 0.01
NUP50-219ENST00000497960 SPARCL1Q14515 664 aa15.09■□□□□ 0.01
NUP50-219ENST00000497960 PTPRCAPQ14761 206 aa15.09■□□□□ 0.01
NUP50-219ENST00000497960 WHAMMP3Q1A5X7 153 aa15.09■□□□□ 0.01
NUP50-219ENST00000497960 GPRC6AQ5T6X5 926 aa15.09■□□□□ 0.01
NUP50-219ENST00000497960 TMEM71Q6P5X7 295 aa15.09■□□□□ 0.01
NUP50-219ENST00000497960 ZNF574Q6ZN55 896 aaPredicted RBP15.09■□□□□ 0.01
NUP50-219ENST00000497960 PRUNE1Q86TP1 453 aa15.09■□□□□ 0.01
NUP50-219ENST00000497960 ZNF547Q8IVP9 402 aa15.09■□□□□ 0.01
NUP50-219ENST00000497960 TRIM48Q8IWZ4 208 aa15.09■□□□□ 0.01
NUP50-219ENST00000497960 DDHD1Q8NEL9 900 aa15.09■□□□□ 0.01
NUP50-219ENST00000497960 OR4K2Q8NGD2 314 aa15.09■□□□□ 0.01
NUP50-219ENST00000497960 ZNF398Q8TD17 642 aa15.09■□□□□ 0.01
NUP50-219ENST00000497960 CRELD1Q96HD1 420 aa15.09■□□□□ 0.01
NUP50-219ENST00000497960 CCDC74BQ96LY2 380 aa15.09■□□□□ 0.01
NUP50-219ENST00000497960 RUNDC3BQ96NL0 473 aa15.09■□□□□ 0.01
NUP50-219ENST00000497960 SMOXQ9NWM0 555 aa15.09■□□□□ 0.01
NUP50-219ENST00000497960 E7EVH7 732 aa15.08■□□□□ 0
NUP50-219ENST00000497960 NVLO15381 856 aaKnown RBP15.08■□□□□ 0
NUP50-219ENST00000497960 PSMD3O43242 534 aa15.08■□□□□ 0
NUP50-219ENST00000497960 VIPP01282 170 aa15.08■□□□□ 0
NUP50-219ENST00000497960 ZSCAN5DPP0CG00 497 aa15.08■□□□□ 0
NUP50-219ENST00000497960 ITIH1P19827 911 aa15.08■□□□□ 0
NUP50-219ENST00000497960 MSH3P20585 1137 aa15.08■□□□□ 0
NUP50-219ENST00000497960 AKT1P31749 480 aa15.08■□□□□ 0
NUP50-219ENST00000497960 CSF2RBP32927 897 aa15.08■□□□□ 0
NUP50-219ENST00000497960 CSTF2P33240 577 aaKnown RBP eCLIP15.08■□□□□ 0
NUP50-219ENST00000497960 MAPK9P45984 424 aa15.08■□□□□ 0
NUP50-219ENST00000497960 VPS41P49754 854 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms