RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 HNRNPA1L2Q32P51 320 aaKnown RBP10.15□□□□□ -0.78
HDAC3-214ENST00000495485 GALNTL6Q49A17 601 aa10.15□□□□□ -0.78
HDAC3-214ENST00000495485 SEL1L3Q68CR1 1132 aa10.15□□□□□ -0.78
HDAC3-214ENST00000495485 TMEM215Q68D42 235 aa10.15□□□□□ -0.78
HDAC3-214ENST00000495485 SERPINA13PQ6UXR4 307 aa10.15□□□□□ -0.78
HDAC3-214ENST00000495485 C11orf74Q86VG3 221 aa10.15□□□□□ -0.78
HDAC3-214ENST00000495485 NRSN1Q8IZ57 195 aa10.15□□□□□ -0.78
HDAC3-214ENST00000495485 MYO1HQ8N1T3 1032 aa10.15□□□□□ -0.78
HDAC3-214ENST00000495485 NXPE1Q8N323 547 aa10.15□□□□□ -0.78
HDAC3-214ENST00000495485 FITM2Q8N6M3 262 aa10.15□□□□□ -0.78
HDAC3-214ENST00000495485 TMEM105Q8N8V8 129 aa10.15□□□□□ -0.78
HDAC3-214ENST00000495485 GRIN3AQ8TCU5 1115 aa10.15□□□□□ -0.78
HDAC3-214ENST00000495485 RAB7BQ96AH8 199 aa10.15□□□□□ -0.78
HDAC3-214ENST00000495485 ERP27Q96DN0 273 aa10.15□□□□□ -0.78
HDAC3-214ENST00000495485 PDLIM5Q96HC4 596 aaKnown RBP10.15□□□□□ -0.78
HDAC3-214ENST00000495485 RMDN2Q96LZ7 410 aa10.15□□□□□ -0.78
HDAC3-214ENST00000495485 BIRC8Q96P09 236 aa10.15□□□□□ -0.78
HDAC3-214ENST00000495485 GPR21Q99679 349 aa10.15□□□□□ -0.78
HDAC3-214ENST00000495485 GABRG3Q99928 467 aa10.15□□□□□ -0.78
HDAC3-214ENST00000495485 ZSCAN5AQ9BUG6 496 aa10.15□□□□□ -0.78
HDAC3-214ENST00000495485 P2RY12Q9H244 342 aa10.15□□□□□ -0.78
HDAC3-214ENST00000495485 FAM83DQ9H4H8 585 aa10.15□□□□□ -0.78
HDAC3-214ENST00000495485 IL26Q9NPH9 171 aa10.15□□□□□ -0.78
HDAC3-214ENST00000495485 LATS2Q9NRM7 1088 aa10.15□□□□□ -0.78
HDAC3-214ENST00000495485 SPATS2LQ9NUQ6 558 aaKnown RBP10.15□□□□□ -0.78
HDAC3-214ENST00000495485 ABCF3Q9NUQ8 709 aa10.15□□□□□ -0.78
HDAC3-214ENST00000495485 SPATA6Q9NWH7 488 aaPredicted RBP10.15□□□□□ -0.78
HDAC3-214ENST00000495485 ZDHHC3Q9NYG2 299 aa10.15□□□□□ -0.78
HDAC3-214ENST00000495485 NFKBIL1Q9UBC1 381 aaPredicted RBP10.15□□□□□ -0.78
HDAC3-214ENST00000495485 B4GALT6Q9UBX8 382 aa10.15□□□□□ -0.78
HDAC3-214ENST00000495485 EBF1Q9UH73 591 aa10.15□□□□□ -0.78
HDAC3-214ENST00000495485 SLC12A4Q9UP95 1085 aa10.15□□□□□ -0.78
HDAC3-214ENST00000495485 STK38LQ9Y2H1 464 aa10.15□□□□□ -0.78
HDAC3-214ENST00000495485 PTPRZ1P23471 2315 aaPredicted RBP10.15□□□□□ -0.79
HDAC3-214ENST00000495485 FAM86C2PA6NEL3 165 aa10.14□□□□□ -0.79
HDAC3-214ENST00000495485 AGAP14A8MT82 685 aa10.14□□□□□ -0.79
HDAC3-214ENST00000495485 KPNA3O00505 521 aaPredicted RBP10.14□□□□□ -0.79
HDAC3-214ENST00000495485 HDAC3O15379 428 aa10.14□□□□□ -0.79
HDAC3-214ENST00000495485 ITM2AO43736 263 aa10.14□□□□□ -0.79
HDAC3-214ENST00000495485 AP2A2O94973 939 aa10.14□□□□□ -0.79
HDAC3-214ENST00000495485 WISP3O95389 354 aaPredicted RBP10.14□□□□□ -0.79
HDAC3-214ENST00000495485 DCNP07585 359 aaKnown RBP10.14□□□□□ -0.79
HDAC3-214ENST00000495485 SERPINA6P08185 405 aa10.14□□□□□ -0.79
HDAC3-214ENST00000495485 F7P08709 466 aaPredicted RBP10.14□□□□□ -0.79
HDAC3-214ENST00000495485 CHRM1P11229 460 aaPredicted RBP10.14□□□□□ -0.79
HDAC3-214ENST00000495485 GFAPP14136 432 aa10.14□□□□□ -0.79
HDAC3-214ENST00000495485 ITGB7P26010 798 aa10.14□□□□□ -0.79
HDAC3-214ENST00000495485 PTSQ03393 145 aa10.14□□□□□ -0.79
HDAC3-214ENST00000495485 KDSRQ06136 332 aa10.14□□□□□ -0.79
HDAC3-214ENST00000495485 DLG1Q12959 904 aa10.14□□□□□ -0.79
HDAC3-214ENST00000495485 MTAPQ13126 283 aa10.14□□□□□ -0.79
HDAC3-214ENST00000495485 ELAVL3Q14576 367 aaKnown RBP10.14□□□□□ -0.79
HDAC3-214ENST00000495485 KRT72Q14CN4 511 aa10.14□□□□□ -0.79
HDAC3-214ENST00000495485 CHRNA6Q15825 494 aa10.14□□□□□ -0.79
HDAC3-214ENST00000495485 LDLRAP1Q5SW96 308 aa10.14□□□□□ -0.79
HDAC3-214ENST00000495485 FAM91A1Q658Y4 838 aa10.14□□□□□ -0.79
HDAC3-214ENST00000495485 FBXL19Q6PCT2 694 aa10.14□□□□□ -0.79
HDAC3-214ENST00000495485 PAQR3Q6TCH7 311 aa10.14□□□□□ -0.79
HDAC3-214ENST00000495485 MACC1Q6ZN28 852 aa10.14□□□□□ -0.79
HDAC3-214ENST00000495485 FRA10AC1Q70Z53 315 aa10.14□□□□□ -0.79
HDAC3-214ENST00000495485 DPPA4Q7L190 304 aa10.14□□□□□ -0.79
HDAC3-214ENST00000495485 EFL1Q7Z2Z2 1120 aaKnown RBP10.14□□□□□ -0.79
HDAC3-214ENST00000495485 ADAMTSL2Q86TH1 951 aa10.14□□□□□ -0.79
HDAC3-214ENST00000495485 ISCA2Q86U28 154 aa10.14□□□□□ -0.79
HDAC3-214ENST00000495485 MTDHQ86UE4 582 aaKnown RBP10.14□□□□□ -0.79
HDAC3-214ENST00000495485 PIANPQ8IYJ0 282 aa10.14□□□□□ -0.79
HDAC3-214ENST00000495485 CHPFQ8IZ52 775 aa10.14□□□□□ -0.79
HDAC3-214ENST00000495485 ARHGAP24Q8N264 748 aa10.14□□□□□ -0.79
HDAC3-214ENST00000495485 FBXO39Q8N4B4 442 aa10.14□□□□□ -0.79
HDAC3-214ENST00000495485 TMEM151AQ8N4L1 468 aa10.14□□□□□ -0.79
HDAC3-214ENST00000495485 TRAM1L1Q8N609 369 aa10.14□□□□□ -0.79
HDAC3-214ENST00000495485 CHST14Q8NCH0 376 aa10.14□□□□□ -0.79
HDAC3-214ENST00000495485 RPLP0P6Q8NHW5 317 aa10.14□□□□□ -0.79
HDAC3-214ENST00000495485 L3HYPDHQ96EM0 354 aa10.14□□□□□ -0.79
HDAC3-214ENST00000495485 SPATA16Q9BXB7 569 aa10.14□□□□□ -0.79
HDAC3-214ENST00000495485 MYLK2Q9H1R3 596 aa10.14□□□□□ -0.79
HDAC3-214ENST00000495485 ALG9Q9H6U8 611 aa10.14□□□□□ -0.79
HDAC3-214ENST00000495485 KCNK13Q9HB14 408 aa10.14□□□□□ -0.79
HDAC3-214ENST00000495485 FBRSL1Q9HCM7 1045 aaKnown RBP10.14□□□□□ -0.79
HDAC3-214ENST00000495485 SARS2Q9NP81 518 aaKnown RBP10.14□□□□□ -0.79
HDAC3-214ENST00000495485 HAO1Q9UJM8 370 aa10.14□□□□□ -0.79
HDAC3-214ENST00000495485 SCML1Q9UN30 329 aa10.14□□□□□ -0.79
HDAC3-214ENST00000495485 MTF2Q9Y483 593 aaPredicted RBP10.14□□□□□ -0.79
HDAC3-214ENST00000495485 TNPO3Q9Y5L0 923 aaKnown RBP10.14□□□□□ -0.79
HDAC3-214ENST00000495485 WASF2Q9Y6W5 498 aa10.14□□□□□ -0.79
HDAC3-214ENST00000495485 EP300Q09472 2414 aaPredicted RBP10.14□□□□□ -0.79
HDAC3-214ENST00000495485 SDK1Q7Z5N4 2213 aa10.13□□□□□ -0.79
HDAC3-214ENST00000495485 C16orf96A6NNT2 1141 aa10.13□□□□□ -0.79
HDAC3-214ENST00000495485 A8MT66 165 aa10.13□□□□□ -0.79
HDAC3-214ENST00000495485 SUPT3HB4E1H0 165 aa10.13□□□□□ -0.79
HDAC3-214ENST00000495485 STX16-NPEPL1H3BU86 382 aa10.13□□□□□ -0.79
HDAC3-214ENST00000495485 MYO1CO00159 1063 aa10.13□□□□□ -0.79
HDAC3-214ENST00000495485 STX16O14662 325 aa10.13□□□□□ -0.79
HDAC3-214ENST00000495485 RAD51BO15315 384 aa10.13□□□□□ -0.79
HDAC3-214ENST00000495485 SUPT3HO75486 399 aa10.13□□□□□ -0.79
HDAC3-214ENST00000495485 SUPT7LO94864 414 aa10.13□□□□□ -0.79
HDAC3-214ENST00000495485 UNC5CO95185 931 aa10.13□□□□□ -0.79
HDAC3-214ENST00000495485 APBB3O95704 486 aa10.13□□□□□ -0.79
HDAC3-214ENST00000495485 ELFN1P0C7U0 828 aa10.13□□□□□ -0.79
HDAC3-214ENST00000495485 ESRRAP11474 423 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms