RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 SLC2A4P14672 509 aa12.29□□□□□ -0.44
TRA2A-209ENST00000494255 PGAM1P18669 254 aa12.29□□□□□ -0.44
TRA2A-209ENST00000494255 PMLP29590 882 aa12.29□□□□□ -0.44
TRA2A-209ENST00000494255 PBLDP30039 288 aaPredicted RBP12.29□□□□□ -0.44
TRA2A-209ENST00000494255 NSG1P42857 185 aa12.29□□□□□ -0.44
TRA2A-209ENST00000494255 CLCNKAP51800 687 aa12.29□□□□□ -0.44
TRA2A-209ENST00000494255 B4GALNT1Q00973 533 aa12.29□□□□□ -0.44
TRA2A-209ENST00000494255 CAV1Q03135 178 aa12.29□□□□□ -0.44
TRA2A-209ENST00000494255 DNAJC3Q13217 504 aa12.29□□□□□ -0.44
TRA2A-209ENST00000494255 BCL7AQ4VC05 210 aa12.29□□□□□ -0.44
TRA2A-209ENST00000494255 MRNIPQ6NTE8 343 aa12.29□□□□□ -0.44
TRA2A-209ENST00000494255 SDCCAG8Q86SQ7 713 aaPredicted RBP12.29□□□□□ -0.44
TRA2A-209ENST00000494255 TMEM135Q86UB9 458 aa12.29□□□□□ -0.44
TRA2A-209ENST00000494255 AMZ2Q86W34 360 aa12.29□□□□□ -0.44
TRA2A-209ENST00000494255 CCNJLQ8IV13 435 aa12.29□□□□□ -0.44
TRA2A-209ENST00000494255 ZNF547Q8IVP9 402 aa12.29□□□□□ -0.44
TRA2A-209ENST00000494255 SLC35F3Q8IY50 421 aa12.29□□□□□ -0.44
TRA2A-209ENST00000494255 LRRC39Q96DD0 335 aa12.29□□□□□ -0.44
TRA2A-209ENST00000494255 SGF29Q96ES7 293 aa12.29□□□□□ -0.44
TRA2A-209ENST00000494255 LRRC1Q9BTT6 524 aa12.29□□□□□ -0.44
TRA2A-209ENST00000494255 VPS37BQ9H9H4 285 aa12.29□□□□□ -0.44
TRA2A-209ENST00000494255 SPATS2LQ9NUQ6 558 aaKnown RBP12.29□□□□□ -0.44
TRA2A-209ENST00000494255 DNAJC16Q9Y2G8 782 aa12.29□□□□□ -0.44
TRA2A-209ENST00000494255 ST14Q9Y5Y6 855 aa12.29□□□□□ -0.44
TRA2A-209ENST00000494255 CPED1A4D0V7 1026 aa12.28□□□□□ -0.44
TRA2A-209ENST00000494255 QSOX1O00391 747 aa12.28□□□□□ -0.44
TRA2A-209ENST00000494255 SNX2O60749 519 aa12.28□□□□□ -0.44
TRA2A-209ENST00000494255 BANF1O75531 89 aa12.28□□□□□ -0.44
TRA2A-209ENST00000494255 RFPL3O75679 317 aa12.28□□□□□ -0.44
TRA2A-209ENST00000494255 AP2A2O94973 939 aa12.28□□□□□ -0.44
TRA2A-209ENST00000494255 FTH1P19P0C7X4 201 aa12.28□□□□□ -0.44
TRA2A-209ENST00000494255 IDSP22304 550 aa12.28□□□□□ -0.44
TRA2A-209ENST00000494255 ACP1P24666 158 aa12.28□□□□□ -0.44
TRA2A-209ENST00000494255 TTPAP49638 278 aa12.28□□□□□ -0.44
TRA2A-209ENST00000494255 SLC7A5Q01650 507 aa12.28□□□□□ -0.44
TRA2A-209ENST00000494255 BIRC2Q13490 618 aa12.28□□□□□ -0.44
TRA2A-209ENST00000494255 THOC5Q13769 683 aaKnown RBP12.28□□□□□ -0.44
TRA2A-209ENST00000494255 LONRF1Q17RB8 773 aa12.28□□□□□ -0.44
TRA2A-209ENST00000494255 OGFOD3Q6PK18 319 aa12.28□□□□□ -0.44
TRA2A-209ENST00000494255 PACS1Q6VY07 963 aa12.28□□□□□ -0.44
TRA2A-209ENST00000494255 AGGF1Q8N302 714 aaeCLIP12.28□□□□□ -0.442e-25■■■□□ 18.3
TRA2A-209ENST00000494255 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.28□□□□□ -0.44
TRA2A-209ENST00000494255 OR6C4Q8NGE1 309 aa12.28□□□□□ -0.44
TRA2A-209ENST00000494255 NAT6Q93015 286 aa12.28□□□□□ -0.44
TRA2A-209ENST00000494255 EBNA1BP2Q99848 306 aaKnown RBP12.28□□□□□ -0.44
TRA2A-209ENST00000494255 TRIM56Q9BRZ2 755 aaKnown RBP12.28□□□□□ -0.44
TRA2A-209ENST00000494255 GRHL1Q9NZI5 618 aa12.28□□□□□ -0.44
TRA2A-209ENST00000494255 SLC23A2Q9UGH3 650 aa12.28□□□□□ -0.44
TRA2A-209ENST00000494255 ARHGEF17Q96PE2 2063 aaPredicted RBP12.27□□□□□ -0.44
TRA2A-209ENST00000494255 LY6G6EA0A0G2JKS1 128 aa12.27□□□□□ -0.45
TRA2A-209ENST00000494255 MGAT4DA6NG13 374 aa12.27□□□□□ -0.45
TRA2A-209ENST00000494255 ESPNB1AK53 854 aa12.27□□□□□ -0.45
TRA2A-209ENST00000494255 ZNF500O60304 480 aaPredicted RBP12.27□□□□□ -0.45
TRA2A-209ENST00000494255 NOBOXO60393 691 aa12.27□□□□□ -0.45
TRA2A-209ENST00000494255 NDUFS3O75489 264 aa12.27□□□□□ -0.45
TRA2A-209ENST00000494255 CDK4P11802 303 aa12.27□□□□□ -0.45
TRA2A-209ENST00000494255 MYF5P13349 255 aa12.27□□□□□ -0.45
TRA2A-209ENST00000494255 ARNTP27540 789 aa12.27□□□□□ -0.45
TRA2A-209ENST00000494255 ELK3P41970 407 aa12.27□□□□□ -0.45
TRA2A-209ENST00000494255 PRLHRP49683 370 aa12.27□□□□□ -0.45
TRA2A-209ENST00000494255 ACADVLP49748 655 aa12.27□□□□□ -0.45
TRA2A-209ENST00000494255 DRG2P55039 364 aaKnown RBP12.27□□□□□ -0.45
TRA2A-209ENST00000494255 PDIA2Q13087 525 aaKnown RBP12.27□□□□□ -0.45
TRA2A-209ENST00000494255 ILKQ13418 452 aa12.27□□□□□ -0.45
TRA2A-209ENST00000494255 MSS51Q4VC12 460 aa12.27□□□□□ -0.45
TRA2A-209ENST00000494255 C14orf28Q4W4Y0 310 aa12.27□□□□□ -0.45
TRA2A-209ENST00000494255 GLE1Q53GS7 698 aaKnown RBP12.27□□□□□ -0.45
TRA2A-209ENST00000494255 SPANXN3Q5MJ09 141 aa12.27□□□□□ -0.45
TRA2A-209ENST00000494255 CENPUQ71F23 418 aa12.27□□□□□ -0.45
TRA2A-209ENST00000494255 C11orf96Q7Z7L8 435 aa12.27□□□□□ -0.45
TRA2A-209ENST00000494255 GPR156Q8NFN8 814 aa12.27□□□□□ -0.45
TRA2A-209ENST00000494255 GABPB2Q8TAK5 448 aaPredicted RBP12.27□□□□□ -0.45
TRA2A-209ENST00000494255 IFI44Q8TCB0 444 aa12.27□□□□□ -0.45
TRA2A-209ENST00000494255 CALML6Q8TD86 181 aa12.27□□□□□ -0.45
TRA2A-209ENST00000494255 NAT14Q8WUY8 206 aa12.27□□□□□ -0.45
TRA2A-209ENST00000494255 CCDC97Q96F63 343 aaPredicted RBP12.27□□□□□ -0.45
TRA2A-209ENST00000494255 PWWP2AQ96N64 755 aa12.27□□□□□ -0.45
TRA2A-209ENST00000494255 FCRL3Q96P31 734 aaPredicted RBP12.27□□□□□ -0.45
TRA2A-209ENST00000494255 CARD6Q9BX69 1037 aa12.27□□□□□ -0.45
TRA2A-209ENST00000494255 MARCH4Q9P2E8 410 aaPredicted RBP12.27□□□□□ -0.45
TRA2A-209ENST00000494255 TBC1D29Q9UFV1 150 aa12.27□□□□□ -0.45
TRA2A-209ENST00000494255 CHMP2BQ9UQN3 213 aa12.27□□□□□ -0.45
TRA2A-209ENST00000494255 PCDHGA1Q9Y5H4 931 aa12.27□□□□□ -0.45
TRA2A-209ENST00000494255 FAM169AQ9Y6X4 670 aa12.27□□□□□ -0.45
TRA2A-209ENST00000494255 U3KQA8 63 aa12.27□□□□□ -0.45
TRA2A-209ENST00000494255 DMXL1Q9Y485 3027 aa12.27□□□□□ -0.45
TRA2A-209ENST00000494255 CFAP54Q96N23 3096 aa12.26□□□□□ -0.45
TRA2A-209ENST00000494255 ZCWPW2A0A1B0GU75 182 aa12.26□□□□□ -0.45
TRA2A-209ENST00000494255 EME2A4GXA9 379 aaPredicted RBP12.26□□□□□ -0.45
TRA2A-209ENST00000494255 OR5K4A6NMS3 321 aa12.26□□□□□ -0.45
TRA2A-209ENST00000494255 PDZK1P1A8MUH7 402 aa12.26□□□□□ -0.45
TRA2A-209ENST00000494255 GOLGA8KD6RF30 607 aa12.26□□□□□ -0.45
TRA2A-209ENST00000494255 GOLGA8TH3BQL2 631 aa12.26□□□□□ -0.45
TRA2A-209ENST00000494255 TP73O15350 636 aa12.26□□□□□ -0.45
TRA2A-209ENST00000494255 FTH1P02794 183 aa12.26□□□□□ -0.45
TRA2A-209ENST00000494255 GSTM1P09488 218 aa12.26□□□□□ -0.45
TRA2A-209ENST00000494255 OR56A5P0C7T3 313 aa12.26□□□□□ -0.45
TRA2A-209ENST00000494255 F3P13726 295 aa12.26□□□□□ -0.45
TRA2A-209ENST00000494255 OGNP20774 298 aaKnown RBP12.26□□□□□ -0.45
TRA2A-209ENST00000494255 ARCN1P48444 511 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms