RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 ERVH48-1M5A8F1 160 aa8.4□□□□□ -1.06
LRCH3-219ENST00000494069 HGSO14964 777 aaPredicted RBP8.4□□□□□ -1.06
LRCH3-219ENST00000494069 KMOO15229 486 aa8.4□□□□□ -1.06
LRCH3-219ENST00000494069 DDX3YO15523 660 aaKnown RBP8.4□□□□□ -1.06
LRCH3-219ENST00000494069 KCNN4O15554 427 aa8.4□□□□□ -1.06
LRCH3-219ENST00000494069 ZW10O43264 779 aa8.4□□□□□ -1.06
LRCH3-219ENST00000494069 DUX1O43812 170 aa8.4□□□□□ -1.06
LRCH3-219ENST00000494069 VEGFDO43915 354 aa8.4□□□□□ -1.06
LRCH3-219ENST00000494069 FTCDO95954 541 aa8.4□□□□□ -1.06
LRCH3-219ENST00000494069 HLA-DPA1P20036 260 aa8.4□□□□□ -1.06
LRCH3-219ENST00000494069 CSTF2P33240 577 aaKnown RBP eCLIP8.4□□□□□ -1.06
LRCH3-219ENST00000494069 ADRA1AP35348 466 aa8.4□□□□□ -1.06
LRCH3-219ENST00000494069 SPAM1P38567 509 aa8.4□□□□□ -1.06
LRCH3-219ENST00000494069 CLCNKAP51800 687 aa8.4□□□□□ -1.06
LRCH3-219ENST00000494069 VAV2P52735 878 aa8.4□□□□□ -1.06
LRCH3-219ENST00000494069 CTSCP53634 463 aa8.4□□□□□ -1.06
LRCH3-219ENST00000494069 GFERP55789 205 aa8.4□□□□□ -1.06
LRCH3-219ENST00000494069 RWDD2BP57060 319 aa8.4□□□□□ -1.06
LRCH3-219ENST00000494069 COPS2P61201 443 aa8.4□□□□□ -1.06
LRCH3-219ENST00000494069 CYP4F2P78329 520 aa8.4□□□□□ -1.06
LRCH3-219ENST00000494069 RHDQ02161 417 aa8.4□□□□□ -1.06
LRCH3-219ENST00000494069 MPP3Q13368 585 aa8.4□□□□□ -1.06
LRCH3-219ENST00000494069 MSLNQ13421 630 aaPredicted RBP8.4□□□□□ -1.06
LRCH3-219ENST00000494069 TRA2AQ13595 282 aaKnown RBP eCLIP8.4□□□□□ -1.06
LRCH3-219ENST00000494069 KIR2DS5Q14953 304 aa8.4□□□□□ -1.06
LRCH3-219ENST00000494069 CLCA4Q14CN2 919 aa8.4□□□□□ -1.06
LRCH3-219ENST00000494069 CLPPQ16740 277 aaPredicted RBP8.4□□□□□ -1.06
LRCH3-219ENST00000494069 TAF1BQ53T94 588 aaPredicted RBP8.4□□□□□ -1.06
LRCH3-219ENST00000494069 ANKRD20A2Q5SQ80 823 aa8.4□□□□□ -1.06
LRCH3-219ENST00000494069 ANKRD20A1Q5TYW2 823 aa8.4□□□□□ -1.06
LRCH3-219ENST00000494069 ANKRD20A3Q5VUR7 823 aa8.4□□□□□ -1.06
LRCH3-219ENST00000494069 PDPK2PQ6A1A2 396 aa8.4□□□□□ -1.06
LRCH3-219ENST00000494069 DARS2Q6PI48 645 aaKnown RBP8.4□□□□□ -1.06
LRCH3-219ENST00000494069 RANBP10Q6VN20 620 aa8.4□□□□□ -1.06
LRCH3-219ENST00000494069 FAM83HQ6ZRV2 1179 aaPredicted RBP8.4□□□□□ -1.06
LRCH3-219ENST00000494069 GLT6D1Q7Z4J2 308 aa8.4□□□□□ -1.06
LRCH3-219ENST00000494069 ARHGAP22Q7Z5H3 698 aa8.4□□□□□ -1.06
LRCH3-219ENST00000494069 KIAA1328Q86T90 577 aa8.4□□□□□ -1.06
LRCH3-219ENST00000494069 LAPTM4BQ86VI4 370 aa8.4□□□□□ -1.06
LRCH3-219ENST00000494069 FAM129CQ86XR2 697 aa8.4□□□□□ -1.06
LRCH3-219ENST00000494069 TRAPPC5Q8IUR0 188 aa8.4□□□□□ -1.06
LRCH3-219ENST00000494069 ZNF843Q8N446 348 aa8.4□□□□□ -1.06
LRCH3-219ENST00000494069 RASGEF1AQ8N9B8 481 aa8.4□□□□□ -1.06
LRCH3-219ENST00000494069 SPC24Q8NBT2 197 aa8.4□□□□□ -1.06
LRCH3-219ENST00000494069 AGBL5Q8NDL9 886 aa8.4□□□□□ -1.06
LRCH3-219ENST00000494069 GDAP1Q8TB36 358 aa8.4□□□□□ -1.06
LRCH3-219ENST00000494069 VPS35Q96QK1 796 aa8.4□□□□□ -1.06
LRCH3-219ENST00000494069 TAAR9Q96RI9 348 aa8.4□□□□□ -1.06
LRCH3-219ENST00000494069 SRPK1Q96SB4 655 aaKnown RBP8.4□□□□□ -1.06
LRCH3-219ENST00000494069 VAT1Q99536 393 aa8.4□□□□□ -1.06
LRCH3-219ENST00000494069 BAG1Q99933 345 aaPredicted RBP8.4□□□□□ -1.06
LRCH3-219ENST00000494069 FSD1LQ9BXM9 530 aa8.4□□□□□ -1.06
LRCH3-219ENST00000494069 ZMYND15Q9H091 742 aa8.4□□□□□ -1.06
LRCH3-219ENST00000494069 GBA3Q9H227 469 aa8.4□□□□□ -1.06
LRCH3-219ENST00000494069 TRABDQ9H4I3 376 aa8.4□□□□□ -1.06
LRCH3-219ENST00000494069 APMAPQ9HDC9 416 aa8.4□□□□□ -1.06
LRCH3-219ENST00000494069 LUC7LQ9NQ29 371 aaKnown RBP8.4□□□□□ -1.06
LRCH3-219ENST00000494069 SLC39A1Q9NY26 324 aa8.4□□□□□ -1.06
LRCH3-219ENST00000494069 AKAP7Q9P0M2 348 aaPredicted RBP8.4□□□□□ -1.06
LRCH3-219ENST00000494069 R3HDM2Q9Y2K5 976 aaKnown RBP8.4□□□□□ -1.06
LRCH3-219ENST00000494069 SDK2Q58EX2 2172 aa8.39□□□□□ -1.07
LRCH3-219ENST00000494069 GLYATL1P3A0A0U1RQE8 302 aa8.39□□□□□ -1.07
LRCH3-219ENST00000494069 CCDC66A2RUB6 948 aa8.39□□□□□ -1.07
LRCH3-219ENST00000494069 OR2AG2A6NM03 316 aa8.39□□□□□ -1.07
LRCH3-219ENST00000494069 OR5K4A6NMS3 321 aa8.39□□□□□ -1.07
LRCH3-219ENST00000494069 CCL22O00626 93 aa8.39□□□□□ -1.07
LRCH3-219ENST00000494069 POP7O75817 140 aaKnown RBP8.39□□□□□ -1.07
LRCH3-219ENST00000494069 IPO7O95373 1038 aaKnown RBP8.39□□□□□ -1.07
LRCH3-219ENST00000494069 PBLDP30039 288 aaPredicted RBP8.39□□□□□ -1.07
LRCH3-219ENST00000494069 PTPN7P35236 360 aa8.39□□□□□ -1.07
LRCH3-219ENST00000494069 LEPRP48357 1165 aaKnown RBP8.39□□□□□ -1.07
LRCH3-219ENST00000494069 GEMP55040 296 aa8.39□□□□□ -1.07
LRCH3-219ENST00000494069 TMPRSS15P98073 1019 aa8.39□□□□□ -1.07
LRCH3-219ENST00000494069 C19orf57Q0VDD7 668 aa8.39□□□□□ -1.07
LRCH3-219ENST00000494069 LINC00303Q3SY05 128 aa8.39□□□□□ -1.07
LRCH3-219ENST00000494069 MANEAQ5SRI9 462 aa8.39□□□□□ -1.07
LRCH3-219ENST00000494069 GPRC6AQ5T6X5 926 aa8.39□□□□□ -1.07
LRCH3-219ENST00000494069 TMEM164Q5U3C3 297 aa8.39□□□□□ -1.07
LRCH3-219ENST00000494069 DENND5AQ6IQ26 1287 aa8.39□□□□□ -1.07
LRCH3-219ENST00000494069 TMEM220Q6QAJ8 160 aa8.39□□□□□ -1.07
LRCH3-219ENST00000494069 WDR74Q6RFH5 385 aaPredicted RBP8.39□□□□□ -1.07
LRCH3-219ENST00000494069 ABRAXAS1Q6UWZ7 409 aa8.39□□□□□ -1.07
LRCH3-219ENST00000494069 TMEM26Q6ZUK4 368 aa8.39□□□□□ -1.07
LRCH3-219ENST00000494069 DET1Q7L5Y6 550 aa8.39□□□□□ -1.07
LRCH3-219ENST00000494069 CDKL3Q8IVW4 592 aaPredicted RBP8.39□□□□□ -1.07
LRCH3-219ENST00000494069 TAB3Q8N5C8 712 aaPredicted RBP8.39□□□□□ -1.07
LRCH3-219ENST00000494069 BEND7Q8N7W2 519 aaPredicted RBP8.39□□□□□ -1.07
LRCH3-219ENST00000494069 EXD3Q8N9H8 876 aa8.39□□□□□ -1.07
LRCH3-219ENST00000494069 OR4K2Q8NGD2 314 aa8.39□□□□□ -1.07
LRCH3-219ENST00000494069 OR13C4Q8NGS5 318 aa8.39□□□□□ -1.07
LRCH3-219ENST00000494069 NKD1Q969G9 470 aa8.39□□□□□ -1.07
LRCH3-219ENST00000494069 SH3KBP1Q96B97 665 aa8.39□□□□□ -1.07
LRCH3-219ENST00000494069 TIMM29Q9BSF4 260 aa8.39□□□□□ -1.07
LRCH3-219ENST00000494069 FAM96AQ9H5X1 160 aa8.39□□□□□ -1.07
LRCH3-219ENST00000494069 STN1Q9H668 368 aaKnown RBP8.39□□□□□ -1.07
LRCH3-219ENST00000494069 HACD3Q9P035 362 aa8.39□□□□□ -1.07
LRCH3-219ENST00000494069 FKBPLQ9UIM3 349 aa8.39□□□□□ -1.07
LRCH3-219ENST00000494069 PSMD13Q9UNM6 376 aa8.39□□□□□ -1.07
LRCH3-219ENST00000494069 EFR3BQ9Y2G0 817 aa8.39□□□□□ -1.07
LRCH3-219ENST00000494069 PCDHGA3Q9Y5H0 932 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms