RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 SGTAO43765 313 aa19.11■□□□□ 0.65
USP39-218ENST00000493829 VEGFDO43915 354 aa19.11■□□□□ 0.65
USP39-218ENST00000493829 ALDOAP04075 364 aaKnown RBP19.11■□□□□ 0.65
USP39-218ENST00000493829 WNT1P04628 370 aa19.11■□□□□ 0.65
USP39-218ENST00000493829 OR56A5P0C7T3 313 aa19.11■□□□□ 0.65
USP39-218ENST00000493829 CNTFP26441 200 aa19.11■□□□□ 0.65
USP39-218ENST00000493829 HTR1BP28222 390 aa19.11■□□□□ 0.65
USP39-218ENST00000493829 SERPINB8P50452 374 aa19.11■□□□□ 0.65
USP39-218ENST00000493829 SIM2Q14190 667 aaPredicted RBP19.11■□□□□ 0.65
USP39-218ENST00000493829 MACC1Q6ZN28 852 aa19.11■□□□□ 0.65
USP39-218ENST00000493829 RD3Q7Z3Z2 195 aa19.11■□□□□ 0.65
USP39-218ENST00000493829 GOLGA6L1Q8N7Z2 621 aa19.11■□□□□ 0.65
USP39-218ENST00000493829 SIDT2Q8NBJ9 832 aaKnown RBP19.11■□□□□ 0.65
USP39-218ENST00000493829 ZBTB44Q8NCP5 570 aa19.11■□□□□ 0.65
USP39-218ENST00000493829 MZB1Q8WU39 189 aa19.11■□□□□ 0.65
USP39-218ENST00000493829 HEXDCQ8WVB3 486 aa19.11■□□□□ 0.65
USP39-218ENST00000493829 KLHDC7BQ96G42 594 aa19.11■□□□□ 0.65
USP39-218ENST00000493829 WDR92Q96MX6 357 aa19.11■□□□□ 0.65
USP39-218ENST00000493829 GPR21Q99679 349 aa19.11■□□□□ 0.65
USP39-218ENST00000493829 SNX15Q9NRS6 342 aa19.11■□□□□ 0.65
USP39-218ENST00000493829 CORO1CQ9ULV4 474 aaPredicted RBP19.11■□□□□ 0.65
USP39-218ENST00000493829 R4GN57 208 aa19.11■□□□□ 0.65
USP39-218ENST00000493829 WDFY4Q6ZS81 3184 aa19.1■□□□□ 0.65
USP39-218ENST00000493829 CEACAM5P06731 702 aa19.1■□□□□ 0.65
USP39-218ENST00000493829 FDXRP22570 491 aa19.1■□□□□ 0.65
USP39-218ENST00000493829 CD38P28907 300 aa19.1■□□□□ 0.65
USP39-218ENST00000493829 ADARP55265 1226 aaKnown RBP19.1■□□□□ 0.65
USP39-218ENST00000493829 RACK1P63244 317 aaKnown RBP19.1■□□□□ 0.65
USP39-218ENST00000493829 RAPH1Q70E73 1250 aa19.1■□□□□ 0.65
USP39-218ENST00000493829 SRRM1Q8IYB3 904 aaKnown RBP19.1■□□□□ 0.65
USP39-218ENST00000493829 OR56A4Q8NGH8 313 aa19.1■□□□□ 0.65
USP39-218ENST00000493829 OR1E3Q8WZA6 343 aa19.1■□□□□ 0.65
USP39-218ENST00000493829 ARL8AQ96BM9 186 aa19.1■□□□□ 0.65
USP39-218ENST00000493829 SLC30A3Q99726 388 aa19.1■□□□□ 0.65
USP39-218ENST00000493829 C1QTNF1Q9BXJ1 281 aa19.1■□□□□ 0.65
USP39-218ENST00000493829 TMBIM4Q9HC24 238 aa19.1■□□□□ 0.65
USP39-218ENST00000493829 TM7SF3Q9NS93 570 aa19.1■□□□□ 0.65
USP39-218ENST00000493829 ZNHIT2Q9UHR6 403 aa19.1■□□□□ 0.65
USP39-218ENST00000493829 SUFUQ9UMX1 484 aa19.1■□□□□ 0.65
USP39-218ENST00000493829 MED16Q9Y2X0 877 aa19.1■□□□□ 0.65
USP39-218ENST00000493829 VWA7Q9Y334 891 aa19.1■□□□□ 0.65
USP39-218ENST00000493829 PCDHGA2Q9Y5H1 932 aa19.1■□□□□ 0.65
USP39-218ENST00000493829 DNAJC6O75061 913 aa19.09■□□□□ 0.65
USP39-218ENST00000493829 VPS26AO75436 327 aa19.09■□□□□ 0.65
USP39-218ENST00000493829 AP2A2O94973 939 aa19.09■□□□□ 0.65
USP39-218ENST00000493829 MT-ND3P03897 115 aa19.09■□□□□ 0.65
USP39-218ENST00000493829 GNPDA1P46926 289 aa19.09■□□□□ 0.65
USP39-218ENST00000493829 PRLHRP49683 370 aa19.09■□□□□ 0.65
USP39-218ENST00000493829 YPEL5P62699 121 aa19.09■□□□□ 0.65
USP39-218ENST00000493829 TIAL1Q01085 375 aaKnown RBP eCLIP19.09■□□□□ 0.65
USP39-218ENST00000493829 PDAP1Q13442 181 aaKnown RBP19.09■□□□□ 0.65
USP39-218ENST00000493829 BOP1Q14137 746 aaKnown RBP19.09■□□□□ 0.65
USP39-218ENST00000493829 RASA2Q15283 850 aa19.09■□□□□ 0.65
USP39-218ENST00000493829 ZNF542PQ5EBM4 170 aa19.09■□□□□ 0.65
USP39-218ENST00000493829 PPM1JQ5JR12 505 aa19.09■□□□□ 0.65
USP39-218ENST00000493829 CROCCP2Q86T23 111 aa19.09■□□□□ 0.65
USP39-218ENST00000493829 ZNF547Q8IVP9 402 aa19.09■□□□□ 0.65
USP39-218ENST00000493829 C4orf33Q8N1A6 199 aa19.09■□□□□ 0.65
USP39-218ENST00000493829 GIMAP7Q8NHV1 300 aa19.09■□□□□ 0.65
USP39-218ENST00000493829 DNASE2BQ8WZ79 361 aa19.09■□□□□ 0.65
USP39-218ENST00000493829 TSACCQ96A04 125 aaPredicted RBP19.09■□□□□ 0.65
USP39-218ENST00000493829 MTBPQ96DY7 904 aa19.09■□□□□ 0.65
USP39-218ENST00000493829 CYP4F12Q9HCS2 524 aa19.09■□□□□ 0.65
USP39-218ENST00000493829 PCMTD2Q9NV79 361 aa19.09■□□□□ 0.65
USP39-218ENST00000493829 KLQ9UEF7 1012 aa19.09■□□□□ 0.65
USP39-218ENST00000493829 PNMA8BQ9ULN7 279 aaPredicted RBP19.09■□□□□ 0.65
USP39-218ENST00000493829 SLC17A4Q9Y2C5 497 aa19.09■□□□□ 0.65
USP39-218ENST00000493829 A0A1W2PR77 199 aa19.08■□□□□ 0.65
USP39-218ENST00000493829 PRSS38A1L453 326 aa19.08■□□□□ 0.65
USP39-218ENST00000493829 BCAT2O15382 392 aaPredicted RBP19.08■□□□□ 0.65
USP39-218ENST00000493829 NUAK1O60285 661 aa19.08■□□□□ 0.65
USP39-218ENST00000493829 OPA1O60313 960 aa19.08■□□□□ 0.65
USP39-218ENST00000493829 FUCA1P04066 466 aa19.08■□□□□ 0.65
USP39-218ENST00000493829 STMN1P16949 149 aa19.08■□□□□ 0.65
USP39-218ENST00000493829 TYK2P29597 1187 aa19.08■□□□□ 0.65
USP39-218ENST00000493829 CNR2P34972 360 aa19.08■□□□□ 0.65
USP39-218ENST00000493829 CSNK1EP49674 416 aaKnown RBP19.08■□□□□ 0.65
USP39-218ENST00000493829 POU4F1Q01851 419 aa19.08■□□□□ 0.65
USP39-218ENST00000493829 C1orf216Q8TAB5 229 aa19.08■□□□□ 0.65
USP39-218ENST00000493829 PIGKQ92643 395 aa19.08■□□□□ 0.65
USP39-218ENST00000493829 KCNJ9Q92806 393 aa19.08■□□□□ 0.65
USP39-218ENST00000493829 PGM2Q96G03 612 aa19.08■□□□□ 0.65
USP39-218ENST00000493829 LRFN3Q9BTN0 628 aa19.08■□□□□ 0.65
USP39-218ENST00000493829 VPS11Q9H270 941 aa19.08■□□□□ 0.65
USP39-218ENST00000493829 CARS2Q9HA77 564 aaKnown RBP19.08■□□□□ 0.65
USP39-218ENST00000493829 TRMT6Q9UJA5 497 aaKnown RBP19.08■□□□□ 0.65
USP39-218ENST00000493829 COMMD10Q9Y6G5 202 aa19.08■□□□□ 0.65
USP39-218ENST00000493829 H3BMM5 538 aa19.08■□□□□ 0.64
USP39-218ENST00000493829 GRID2O43424 1007 aa19.08■□□□□ 0.64
USP39-218ENST00000493829 RFPL1O75677 317 aa19.08■□□□□ 0.64
USP39-218ENST00000493829 FTH1P02794 183 aa19.08■□□□□ 0.64
USP39-218ENST00000493829 HOXC4P09017 264 aaPredicted RBP19.08■□□□□ 0.64
USP39-218ENST00000493829 KELP23276 732 aa19.08■□□□□ 0.64
USP39-218ENST00000493829 RAB10P61026 200 aa19.08■□□□□ 0.64
USP39-218ENST00000493829 IRF9Q00978 393 aa19.08■□□□□ 0.64
USP39-218ENST00000493829 BCL7AQ4VC05 210 aa19.08■□□□□ 0.64
USP39-218ENST00000493829 TTMPQ5BVD1 217 aa19.08■□□□□ 0.64
USP39-218ENST00000493829 LRRTM4Q86VH4 590 aa19.08■□□□□ 0.64
USP39-218ENST00000493829 GALNT13Q8IUC8 556 aa19.08■□□□□ 0.64
USP39-218ENST00000493829 ELMO1Q92556 727 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms