RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 SENP5Q96HI0 755 aaPredicted RBP3.78□□□□□ -1.8
SMC4-223ENST00000493695 MAP7D2Q96T17 732 aa3.78□□□□□ -1.8
SMC4-223ENST00000493695 RBM4BQ9BQ04 359 aaKnown RBP3.78□□□□□ -1.8
SMC4-223ENST00000493695 TREX2Q9BQ50 279 aaPredicted RBP3.78□□□□□ -1.8
SMC4-223ENST00000493695 FAM110AQ9BQ89 295 aa3.78□□□□□ -1.8
SMC4-223ENST00000493695 SYT11Q9BT88 431 aa3.78□□□□□ -1.8
SMC4-223ENST00000493695 H2AFJQ9BTM1 129 aa3.78□□□□□ -1.8
SMC4-223ENST00000493695 TUBB2BQ9BVA1 445 aa3.78□□□□□ -1.8
SMC4-223ENST00000493695 SCPEP1Q9HB40 452 aa3.78□□□□□ -1.8
SMC4-223ENST00000493695 ACSS1Q9NUB1 689 aaPredicted RBP3.78□□□□□ -1.8
SMC4-223ENST00000493695 PTTG2Q9NZH5 202 aa3.78□□□□□ -1.8
SMC4-223ENST00000493695 ORC3Q9UBD5 711 aaPredicted RBP3.78□□□□□ -1.8
SMC4-223ENST00000493695 KCNJ14Q9UNX9 436 aa3.78□□□□□ -1.8
SMC4-223ENST00000493695 EXOGQ9Y2C4 368 aaKnown RBP3.78□□□□□ -1.8
SMC4-223ENST00000493695 RUSC2Q8N2Y8 1516 aa3.78□□□□□ -1.8
SMC4-223ENST00000493695 SNAP23O00161 211 aa3.77□□□□□ -1.81
SMC4-223ENST00000493695 PAGE4O60829 102 aa3.77□□□□□ -1.81
SMC4-223ENST00000493695 HMBSP08397 361 aa3.77□□□□□ -1.81
SMC4-223ENST00000493695 PLA2G4BP0C869 781 aa3.77□□□□□ -1.81
SMC4-223ENST00000493695 CEACAM1P13688 526 aa3.77□□□□□ -1.81
SMC4-223ENST00000493695 ACADSP16219 412 aa3.77□□□□□ -1.81
SMC4-223ENST00000493695 CHMP24386 653 aa3.77□□□□□ -1.81
SMC4-223ENST00000493695 HARS2P49590 506 aaKnown RBP3.77□□□□□ -1.81
SMC4-223ENST00000493695 GNAQP50148 359 aa3.77□□□□□ -1.81
SMC4-223ENST00000493695 SNRPD1P62314 119 aaKnown RBP3.77□□□□□ -1.81
SMC4-223ENST00000493695 TBCEQ15813 527 aaPredicted RBP3.77□□□□□ -1.81
SMC4-223ENST00000493695 GSTA3Q16772 222 aa3.77□□□□□ -1.81
SMC4-223ENST00000493695 KIAA1644Q3SXP7 199 aa3.77□□□□□ -1.81
SMC4-223ENST00000493695 SNX30Q5VWJ9 437 aa3.77□□□□□ -1.81
SMC4-223ENST00000493695 CDC73Q6P1J9 531 aa3.77□□□□□ -1.81
SMC4-223ENST00000493695 QSOX2Q6ZRP7 698 aa3.77□□□□□ -1.81
SMC4-223ENST00000493695 LONP2Q86WA8 852 aa3.77□□□□□ -1.81
SMC4-223ENST00000493695 CCDC13Q8IYE1 715 aa3.77□□□□□ -1.81
SMC4-223ENST00000493695 RDM1Q8NG50 284 aa3.77□□□□□ -1.81
SMC4-223ENST00000493695 ETNPPLQ8TBG4 499 aa3.77□□□□□ -1.81
SMC4-223ENST00000493695 DNAAF4Q8WXU2 420 aa3.77□□□□□ -1.81
SMC4-223ENST00000493695 PHF21AQ96BD5 680 aa3.77□□□□□ -1.81
SMC4-223ENST00000493695 PABPC5Q96DU9 382 aaKnown RBP3.77□□□□□ -1.81
SMC4-223ENST00000493695 KIF1BPQ96EK5 621 aa3.77□□□□□ -1.81
SMC4-223ENST00000493695 MOCOSQ96EN8 888 aa3.77□□□□□ -1.81
SMC4-223ENST00000493695 ABHD8Q96I13 439 aa3.77□□□□□ -1.81
SMC4-223ENST00000493695 SLC41A2Q96JW4 573 aa3.77□□□□□ -1.81
SMC4-223ENST00000493695 AGAP3Q96P47 875 aa3.77□□□□□ -1.81
SMC4-223ENST00000493695 PIP5K1AQ99755 562 aa3.77□□□□□ -1.81
SMC4-223ENST00000493695 MUC13Q9H3R2 512 aa3.77□□□□□ -1.81
SMC4-223ENST00000493695 PCDHB16Q9NRJ7 776 aa3.77□□□□□ -1.81
SMC4-223ENST00000493695 SMC4Q9NTJ3 1288 aa3.77□□□□□ -1.81
SMC4-223ENST00000493695 IRAK4Q9NWZ3 460 aa3.77□□□□□ -1.81
SMC4-223ENST00000493695 BARHL2Q9NY43 387 aa3.77□□□□□ -1.81
SMC4-223ENST00000493695 ABI3Q9P2A4 366 aa3.77□□□□□ -1.81
SMC4-223ENST00000493695 CEPT1Q9Y6K0 416 aa3.77□□□□□ -1.81
SMC4-223ENST00000493695 CAPN7Q9Y6W3 813 aa3.77□□□□□ -1.81
SMC4-223ENST00000493695 PIAS3Q9Y6X2 628 aa3.77□□□□□ -1.81
SMC4-223ENST00000493695 UTYO14607 1347 aa3.76□□□□□ -1.81
SMC4-223ENST00000493695 A0A1W2PRG0 241 aa3.76□□□□□ -1.81
SMC4-223ENST00000493695 PI4KAP2A4QPH2 592 aa3.76□□□□□ -1.81
SMC4-223ENST00000493695 OR5K3A6NET4 321 aa3.76□□□□□ -1.81
SMC4-223ENST00000493695 USP17L23D6RBM5 183 aa3.76□□□□□ -1.81
SMC4-223ENST00000493695 SYNCRIPO60506 623 aaKnown RBP3.76□□□□□ -1.81
SMC4-223ENST00000493695 SEC31AO94979 1220 aaKnown RBP3.76□□□□□ -1.81
SMC4-223ENST00000493695 FTCDO95954 541 aa3.76□□□□□ -1.81
SMC4-223ENST00000493695 SCGB1D1O95968 90 aa3.76□□□□□ -1.81
SMC4-223ENST00000493695 MSH3P20585 1137 aa3.76□□□□□ -1.81
SMC4-223ENST00000493695 CDAP32320 146 aa3.76□□□□□ -1.81
SMC4-223ENST00000493695 NEXNQ0ZGT2 675 aa3.76□□□□□ -1.81
SMC4-223ENST00000493695 ENPP2Q13822 863 aa3.76□□□□□ -1.81
SMC4-223ENST00000493695 CCNG2Q16589 344 aa3.76□□□□□ -1.81
SMC4-223ENST00000493695 ALG11Q2TAA5 492 aa3.76□□□□□ -1.81
SMC4-223ENST00000493695 MYLK3Q32MK0 819 aa3.76□□□□□ -1.81
SMC4-223ENST00000493695 C18orf63Q68DL7 685 aa3.76□□□□□ -1.81
SMC4-223ENST00000493695 BHLHB9Q6PI77 547 aa3.76□□□□□ -1.81
SMC4-223ENST00000493695 PQLC2Q6ZP29 291 aa3.76□□□□□ -1.81
SMC4-223ENST00000493695 PXKQ7Z7A4 578 aa3.76□□□□□ -1.81
SMC4-223ENST00000493695 NGEFQ8N5V2 710 aa3.76□□□□□ -1.81
SMC4-223ENST00000493695 THAP6Q8TBB0 222 aa3.76□□□□□ -1.81
SMC4-223ENST00000493695 UCMAQ8WVF2 138 aa3.76□□□□□ -1.81
SMC4-223ENST00000493695 PSPC1Q8WXF1 523 aaKnown RBP3.76□□□□□ -1.81
SMC4-223ENST00000493695 APBB2Q92870 758 aa3.76□□□□□ -1.81
SMC4-223ENST00000493695 PRMT6Q96LA8 375 aaPredicted RBP3.76□□□□□ -1.81
SMC4-223ENST00000493695 ZNF300Q96RE9 604 aaPredicted RBP3.76□□□□□ -1.81
SMC4-223ENST00000493695 PCGF1Q9BSM1 259 aa3.76□□□□□ -1.81
SMC4-223ENST00000493695 PDCL3Q9H2J4 239 aa3.76□□□□□ -1.81
SMC4-223ENST00000493695 PRKRIP1Q9H875 184 aaPredicted RBP3.76□□□□□ -1.81
SMC4-223ENST00000493695 ZBTB20Q9HC78 741 aaPredicted RBP3.76□□□□□ -1.81
SMC4-223ENST00000493695 ASAH2Q9NR71 780 aa3.76□□□□□ -1.81
SMC4-223ENST00000493695 SLC38A7Q9NVC3 462 aa3.76□□□□□ -1.81
SMC4-223ENST00000493695 FAM120CQ9NX05 1096 aaKnown RBP3.76□□□□□ -1.81
SMC4-223ENST00000493695 KLHL8Q9P2G9 620 aaPredicted RBP3.76□□□□□ -1.81
SMC4-223ENST00000493695 A0A1W2PPI3 338 aa3.75□□□□□ -1.81
SMC4-223ENST00000493695 TMEM178BH3BS89 294 aa3.75□□□□□ -1.81
SMC4-223ENST00000493695 TSHBP01222 138 aa3.75□□□□□ -1.81
SMC4-223ENST00000493695 HSPA1AP0DMV8 641 aaKnown RBP3.75□□□□□ -1.81
SMC4-223ENST00000493695 HSPA1BP0DMV9 641 aaKnown RBP3.75□□□□□ -1.81
SMC4-223ENST00000493695 GATA1P15976 413 aaPredicted RBP3.75□□□□□ -1.81
SMC4-223ENST00000493695 CDH2P19022 906 aaPredicted RBP3.75□□□□□ -1.81
SMC4-223ENST00000493695 MCCP23508 829 aa3.75□□□□□ -1.81
SMC4-223ENST00000493695 BMXP51813 675 aa3.75□□□□□ -1.81
SMC4-223ENST00000493695 CLDN20P56880 219 aa3.75□□□□□ -1.81
SMC4-223ENST00000493695 RPS3AP61247 264 aaKnown RBP3.75□□□□□ -1.81
SMC4-223ENST00000493695 OLR1P78380 273 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms