RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 C9orf64Q5T6V5 341 aa9.03□□□□□ -0.96
SMARCC1-208ENST00000492896 GPRC6AQ5T6X5 926 aa9.03□□□□□ -0.96
SMARCC1-208ENST00000492896 HENMT1Q5T8I9 393 aaKnown RBP9.03□□□□□ -0.96
SMARCC1-208ENST00000492896 ANKS6Q68DC2 871 aa9.03□□□□□ -0.96
SMARCC1-208ENST00000492896 RPS27LQ71UM5 84 aaKnown RBP9.03□□□□□ -0.96
SMARCC1-208ENST00000492896 MTSS1LQ765P7 747 aa9.03□□□□□ -0.96
SMARCC1-208ENST00000492896 DSG4Q86SJ6 1040 aa9.03□□□□□ -0.96
SMARCC1-208ENST00000492896 RAVER1Q8IY67 606 aaKnown RBP9.03□□□□□ -0.96
SMARCC1-208ENST00000492896 NRSN1Q8IZ57 195 aa9.03□□□□□ -0.96
SMARCC1-208ENST00000492896 CLDN19Q8N6F1 224 aa9.03□□□□□ -0.96
SMARCC1-208ENST00000492896 SUSD6Q92537 303 aa9.03□□□□□ -0.96
SMARCC1-208ENST00000492896 DCUN1D1Q96GG9 259 aa9.03□□□□□ -0.96
SMARCC1-208ENST00000492896 OR52B2Q96RD2 323 aa9.03□□□□□ -0.96
SMARCC1-208ENST00000492896 ZSCAN5AQ9BUG6 496 aa9.03□□□□□ -0.96
SMARCC1-208ENST00000492896 C1QTNF3Q9BXJ4 246 aa9.03□□□□□ -0.96
SMARCC1-208ENST00000492896 FAM126AQ9BYI3 521 aaPredicted RBP9.03□□□□□ -0.96
SMARCC1-208ENST00000492896 S1PR5Q9H228 398 aa9.03□□□□□ -0.96
SMARCC1-208ENST00000492896 TMEM245Q9H330 911 aa9.03□□□□□ -0.96
SMARCC1-208ENST00000492896 DYRK4Q9NR20 520 aa9.03□□□□□ -0.96
SMARCC1-208ENST00000492896 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.03□□□□□ -0.96
SMARCC1-208ENST00000492896 CD274Q9NZQ7 290 aa9.03□□□□□ -0.96
SMARCC1-208ENST00000492896 CLEC1BQ9P126 229 aa9.03□□□□□ -0.96
SMARCC1-208ENST00000492896 THAP10Q9P2Z0 257 aaPredicted RBP9.03□□□□□ -0.96
SMARCC1-208ENST00000492896 TSR3Q9UJK0 312 aaKnown RBP9.03□□□□□ -0.96
SMARCC1-208ENST00000492896 FIS1Q9Y3D6 152 aa9.03□□□□□ -0.96
SMARCC1-208ENST00000492896 GOLGA8QA0A0J9YX86 632 aa9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 GOLGA8OA6NCC3 632 aa9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 LRRC14BA6NHZ5 514 aa9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 NCF1BA6NI72 391 aaPredicted RBP9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 NCF1CA8MVU1 366 aaPredicted RBP9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 GOLGA8NF8WBI6 632 aa9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 H0Y858 1186 aa9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 EIF3FO00303 357 aaPredicted RBP9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 SDHDO14521 159 aa9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 RASSF9O75901 435 aa9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 AP2A2O94973 939 aa9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 KRT16P08779 473 aa9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 CBSLP0DN79 551 aa9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 ENO3P13929 434 aaPredicted RBP9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 NCF1P14598 390 aaPredicted RBP9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 TSPAN8P19075 237 aa9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 MSH3P20585 1137 aa9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 EPHA3P29320 983 aa9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 PRDX6P30041 224 aa9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 CBSP35520 551 aa9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 ETV3P41162 512 aa9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 GRIA2P42262 883 aa9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 IL12RB1P42701 662 aa9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 HK3P52790 923 aa9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 CDH13P55290 713 aa9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 ELF3P78545 371 aaPredicted RBP9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 B4GALNT1Q00973 533 aa9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 CLCQ05315 142 aa9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 BTKQ06187 659 aa9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 LCP2Q13094 533 aa9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 ACOX1Q15067 660 aa9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 E2F5Q15329 346 aa9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 LSM12Q3MHD2 195 aaKnown RBP9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 FBXW10Q5XX13 1052 aa9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 EGFLAMQ63HQ2 1017 aa9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 NAIF1Q69YI7 327 aaPredicted RBP9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 NXNQ6DKJ4 435 aa9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 CYB5D1Q6P9G0 228 aa9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 FBXL19Q6PCT2 694 aa9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 PARM1Q6UWI2 310 aa9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 SBSNQ6UWP8 590 aa9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 LIPIQ6XZB0 460 aa9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 EP400NLQ6ZTU2 488 aa9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 NUDT18Q6ZVK8 323 aa9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 Q6ZVL8 140 aa9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 TECPR1Q7Z6L1 1165 aa9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 SFTPA1Q8IWL2 248 aa9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 SUGP1Q8IWZ8 645 aaKnown RBP9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 DDHD1Q8NEL9 900 aa9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 ZNF483Q8TF39 744 aaPredicted RBP9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 NAT14Q8WUY8 206 aa9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 FGF14Q92915 247 aa9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 SCAMP4Q969E2 229 aa9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 MAELQ96JY0 434 aaKnown RBP9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 PPP1R36Q96LQ0 422 aa9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 VPS35Q96QK1 796 aa9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 BTBD10Q9BSF8 475 aa9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 RIOK2Q9BVS4 552 aaKnown RBP9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 TRMT61BQ9BVS5 477 aaKnown RBP9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 WDR55Q9H6Y2 383 aaPredicted RBP9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 MEAF6Q9HAF1 191 aa9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 MID1IP1Q9NPA3 183 aa9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 LATS2Q9NRM7 1088 aa9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 CLDND1Q9NY35 253 aa9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 LMCD1Q9NZU5 365 aa9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 SUN2Q9UH99 717 aa9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 SARDHQ9UL12 918 aa9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 TMPRSS11EQ9UL52 423 aa9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 PPM1HQ9ULR3 514 aa9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 ITM2BQ9Y287 266 aa9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 STK38LQ9Y2H1 464 aa9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 TRAF6Q9Y4K3 522 aa9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 OARD1Q9Y530 152 aa9.02□□□□□ -0.97
SMARCC1-208ENST00000492896 LAMA2P24043 3122 aaKnown RBP9.01□□□□□ -0.97
SMARCC1-208ENST00000492896 FADS2P1A8MWK0 482 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms