RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 MPP3Q13368 585 aa16.97■□□□□ 0.31
SGMS1-204ENST00000492601 PTPRCAPQ14761 206 aa16.97■□□□□ 0.31
SGMS1-204ENST00000492601 PPP2R5EQ16537 467 aa16.97■□□□□ 0.31
SGMS1-204ENST00000492601 CEACAM20Q6UY09 585 aa16.97■□□□□ 0.31
SGMS1-204ENST00000492601 C11orf96Q7Z7L8 435 aa16.97■□□□□ 0.31
SGMS1-204ENST00000492601 PLXDC1Q8IUK5 500 aa16.97■□□□□ 0.31
SGMS1-204ENST00000492601 RNF31Q96EP0 1072 aa16.97■□□□□ 0.31
SGMS1-204ENST00000492601 TTC25Q96NG3 672 aa16.97■□□□□ 0.31
SGMS1-204ENST00000492601 TGM7Q96PF1 710 aa16.97■□□□□ 0.31
SGMS1-204ENST00000492601 TEFMQ96QE5 360 aaKnown RBP16.97■□□□□ 0.31
SGMS1-204ENST00000492601 FSD1LQ9BXM9 530 aa16.97■□□□□ 0.31
SGMS1-204ENST00000492601 SLC12A9Q9BXP2 914 aa16.97■□□□□ 0.31
SGMS1-204ENST00000492601 UCK1Q9HA47 277 aa16.97■□□□□ 0.31
SGMS1-204ENST00000492601 LUC7LQ9NQ29 371 aaKnown RBP16.97■□□□□ 0.31
SGMS1-204ENST00000492601 HACD3Q9P035 362 aa16.97■□□□□ 0.31
SGMS1-204ENST00000492601 PILRAQ9UKJ1 303 aa16.97■□□□□ 0.31
SGMS1-204ENST00000492601 MN1Q10571 1320 aaPredicted RBP16.96■□□□□ 0.31
SGMS1-204ENST00000492601 GLYATL1P3A0A0U1RQE8 302 aa16.96■□□□□ 0.31
SGMS1-204ENST00000492601 MACROD2A1Z1Q3 448 aa16.96■□□□□ 0.31
SGMS1-204ENST00000492601 RCCD1A6NED2 376 aa16.96■□□□□ 0.31
SGMS1-204ENST00000492601 PRR19A6NJB7 356 aa16.96■□□□□ 0.31
SGMS1-204ENST00000492601 SOWAHDA6NJG2 315 aa16.96■□□□□ 0.31
SGMS1-204ENST00000492601 PYCARD-AS1I3L0S3 204 aa16.96■□□□□ 0.31
SGMS1-204ENST00000492601 J3QKU1 62 aa16.96■□□□□ 0.31
SGMS1-204ENST00000492601 APOC4-APOC2K7ER74 178 aa16.96■□□□□ 0.31
SGMS1-204ENST00000492601 AGTP01019 485 aa16.96■□□□□ 0.31
SGMS1-204ENST00000492601 APOC2P02655 101 aa16.96■□□□□ 0.31
SGMS1-204ENST00000492601 AMD1P17707 334 aa16.96■□□□□ 0.31
SGMS1-204ENST00000492601 HLA-DPA1P20036 260 aa16.96■□□□□ 0.31
SGMS1-204ENST00000492601 SEPHS1P49903 392 aa16.96■□□□□ 0.31
SGMS1-204ENST00000492601 CXorf40BQ96DE9 158 aa16.96■□□□□ 0.31
SGMS1-204ENST00000492601 FICDQ9BVA6 458 aa16.96■□□□□ 0.31
SGMS1-204ENST00000492601 FBXO8Q9NRD0 319 aa16.96■□□□□ 0.31
SGMS1-204ENST00000492601 TRHDEQ9UKU6 1024 aa16.96■□□□□ 0.31
SGMS1-204ENST00000492601 WDR37Q9Y2I8 494 aa16.96■□□□□ 0.31
SGMS1-204ENST00000492601 PKP3Q9Y446 797 aa16.96■□□□□ 0.31
SGMS1-204ENST00000492601 SPTBP11277 2137 aa16.96■□□□□ 0.3
SGMS1-204ENST00000492601 CAPN5O15484 640 aaPredicted RBP16.95■□□□□ 0.3
SGMS1-204ENST00000492601 VCLP18206 1134 aa16.95■□□□□ 0.3
SGMS1-204ENST00000492601 LEPRP48357 1165 aaKnown RBP16.95■□□□□ 0.3
SGMS1-204ENST00000492601 CTSCP53634 463 aa16.95■□□□□ 0.3
SGMS1-204ENST00000492601 NAP1L1P55209 391 aaKnown RBP16.95■□□□□ 0.3
SGMS1-204ENST00000492601 OTUD4Q01804 1114 aaKnown RBP16.95■□□□□ 0.3
SGMS1-204ENST00000492601 FOXM1Q08050 763 aa16.95■□□□□ 0.3
SGMS1-204ENST00000492601 XRCC4Q13426 336 aa16.95■□□□□ 0.3
SGMS1-204ENST00000492601 OLIG2Q13516 323 aa16.95■□□□□ 0.3
SGMS1-204ENST00000492601 GPR18Q14330 331 aa16.95■□□□□ 0.3
SGMS1-204ENST00000492601 CLCA4Q14CN2 919 aa16.95■□□□□ 0.3
SGMS1-204ENST00000492601 ZDHHC20Q5W0Z9 365 aa16.95■□□□□ 0.3
SGMS1-204ENST00000492601 TMEM220Q6QAJ8 160 aa16.95■□□□□ 0.3
SGMS1-204ENST00000492601 ABRAXAS1Q6UWZ7 409 aa16.95■□□□□ 0.3
SGMS1-204ENST00000492601 TIPARPQ7Z3E1 657 aaKnown RBP16.95■□□□□ 0.3
SGMS1-204ENST00000492601 PRICKLE2Q7Z3G6 844 aa16.95■□□□□ 0.3
SGMS1-204ENST00000492601 UNC5BQ8IZJ1 945 aa16.95■□□□□ 0.3
SGMS1-204ENST00000492601 NLGN4XQ8N0W4 816 aa16.95■□□□□ 0.3
SGMS1-204ENST00000492601 RASGEF1AQ8N9B8 481 aa16.95■□□□□ 0.3
SGMS1-204ENST00000492601 NLGN4YQ8NFZ3 816 aaPredicted RBP16.95■□□□□ 0.3
SGMS1-204ENST00000492601 ACTL9Q8TC94 416 aa16.95■□□□□ 0.3
SGMS1-204ENST00000492601 BRSK1Q8TDC3 778 aa16.95■□□□□ 0.3
SGMS1-204ENST00000492601 RSC1A1Q92681 617 aa16.95■□□□□ 0.3
SGMS1-204ENST00000492601 C9orf72Q96LT7 481 aa16.95■□□□□ 0.3
SGMS1-204ENST00000492601 FAM118BQ9BPY3 351 aa16.95■□□□□ 0.3
SGMS1-204ENST00000492601 APOL2Q9BQE5 337 aa16.95■□□□□ 0.3
SGMS1-204ENST00000492601 GORASP1Q9BQQ3 440 aa16.95■□□□□ 0.3
SGMS1-204ENST00000492601 SPRY4Q9C004 299 aa16.95■□□□□ 0.3
SGMS1-204ENST00000492601 ZCCHC2Q9C0B9 1178 aaKnown RBP16.95■□□□□ 0.3
SGMS1-204ENST00000492601 GBA3Q9H227 469 aa16.95■□□□□ 0.3
SGMS1-204ENST00000492601 SLC40A1Q9NP59 571 aa16.95■□□□□ 0.3
SGMS1-204ENST00000492601 POT1Q9NUX5 634 aa16.95■□□□□ 0.3
SGMS1-204ENST00000492601 ARL5AQ9Y689 179 aa16.95■□□□□ 0.3
SGMS1-204ENST00000492601 EPN1Q9Y6I3 576 aaPredicted RBP16.95■□□□□ 0.3
SGMS1-204ENST00000492601 DUSP10Q9Y6W6 482 aa16.95■□□□□ 0.3
SGMS1-204ENST00000492601 ASH1LQ9NR48 2969 aaKnown RBP16.95■□□□□ 0.3
SGMS1-204ENST00000492601 OR2AG2A6NM03 316 aa16.94■□□□□ 0.3
SGMS1-204ENST00000492601 GAPDHSO14556 408 aaPredicted RBP16.94■□□□□ 0.3
SGMS1-204ENST00000492601 POLR1CO15160 346 aaPredicted RBP16.94■□□□□ 0.3
SGMS1-204ENST00000492601 STX7O15400 261 aaKnown RBP16.94■□□□□ 0.3
SGMS1-204ENST00000492601 SLC28A2O43868 658 aa16.94■□□□□ 0.3
SGMS1-204ENST00000492601 RASSF9O75901 435 aa16.94■□□□□ 0.3
SGMS1-204ENST00000492601 STK17BO94768 372 aa16.94■□□□□ 0.3
SGMS1-204ENST00000492601 NDUFA10O95299 355 aa16.94■□□□□ 0.3
SGMS1-204ENST00000492601 C9P02748 559 aa16.94■□□□□ 0.3
SGMS1-204ENST00000492601 ANKRD34CP0C6C1 535 aa16.94■□□□□ 0.3
SGMS1-204ENST00000492601 PBLDP30039 288 aaPredicted RBP16.94■□□□□ 0.3
SGMS1-204ENST00000492601 CTNNA1P35221 906 aaKnown RBP16.94■□□□□ 0.3
SGMS1-204ENST00000492601 ZNF75DP51815 510 aa16.94■□□□□ 0.3
SGMS1-204ENST00000492601 GEMP55040 296 aa16.94■□□□□ 0.3
SGMS1-204ENST00000492601 COPS2P61201 443 aa16.94■□□□□ 0.3
SGMS1-204ENST00000492601 NFKB2Q00653 900 aa16.94■□□□□ 0.3
SGMS1-204ENST00000492601 LDLRAP1Q5SW96 308 aa16.94■□□□□ 0.3
SGMS1-204ENST00000492601 GPRC6AQ5T6X5 926 aa16.94■□□□□ 0.3
SGMS1-204ENST00000492601 AGAP9Q5VTM2 703 aa16.94■□□□□ 0.3
SGMS1-204ENST00000492601 WASH2PQ6VEQ5 465 aa16.94■□□□□ 0.3
SGMS1-204ENST00000492601 AMZ2Q86W34 360 aa16.94■□□□□ 0.3
SGMS1-204ENST00000492601 DDHD1Q8NEL9 900 aa16.94■□□□□ 0.3
SGMS1-204ENST00000492601 PANX2Q96RD6 677 aa16.94■□□□□ 0.3
SGMS1-204ENST00000492601 ZPBPQ9BS86 351 aa16.94■□□□□ 0.3
SGMS1-204ENST00000492601 FAM117AQ9C073 453 aa16.94■□□□□ 0.3
SGMS1-204ENST00000492601 GPN2Q9H9Y4 310 aaPredicted RBP16.94■□□□□ 0.3
SGMS1-204ENST00000492601 WASH6PQ9NQA3 447 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms