RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 TMEM26Q6ZUK4 368 aa8.75□□□□□ -1.01
HDAC3-211ENST00000491581 DAAM2Q86T65 1068 aa8.75□□□□□ -1.01
HDAC3-211ENST00000491581 PRUNE1Q86TP1 453 aa8.75□□□□□ -1.01
HDAC3-211ENST00000491581 SLC9B2Q86UD5 537 aa8.75□□□□□ -1.01
HDAC3-211ENST00000491581 LRRTM4Q86VH4 590 aa8.75□□□□□ -1.01
HDAC3-211ENST00000491581 PHYKPLQ8IUZ5 450 aa8.75□□□□□ -1.01
HDAC3-211ENST00000491581 TMEM151BQ8IW70 566 aa8.75□□□□□ -1.01
HDAC3-211ENST00000491581 GALNT6Q8NCL4 622 aa8.75□□□□□ -1.01
HDAC3-211ENST00000491581 LSM14AQ8ND56 463 aaKnown RBP8.75□□□□□ -1.01
HDAC3-211ENST00000491581 OR13C4Q8NGS5 318 aa8.75□□□□□ -1.01
HDAC3-211ENST00000491581 CCDC110Q8TBZ0 833 aa8.75□□□□□ -1.01
HDAC3-211ENST00000491581 ALG3Q92685 438 aa8.75□□□□□ -1.01
HDAC3-211ENST00000491581 C9orf72Q96LT7 481 aa8.75□□□□□ -1.01
HDAC3-211ENST00000491581 QKIQ96PU8 341 aaKnown RBP eCLIP8.75□□□□□ -1.01
HDAC3-211ENST00000491581 OR6C1Q96RD1 312 aa8.75□□□□□ -1.01
HDAC3-211ENST00000491581 TRIM5Q9C035 493 aa8.75□□□□□ -1.01
HDAC3-211ENST00000491581 ZNF71Q9NQZ8 489 aaPredicted RBP8.75□□□□□ -1.01
HDAC3-211ENST00000491581 IL17CQ9P0M4 197 aa8.75□□□□□ -1.01
HDAC3-211ENST00000491581 RSPH14Q9UHP6 348 aa8.75□□□□□ -1.01
HDAC3-211ENST00000491581 FKBPLQ9UIM3 349 aa8.75□□□□□ -1.01
HDAC3-211ENST00000491581 PCDHGA3Q9Y5H0 932 aa8.75□□□□□ -1.01
HDAC3-211ENST00000491581 IGHV5-51A0A0C4DH38 117 aa8.74□□□□□ -1.01
HDAC3-211ENST00000491581 ZNF487B1APH4 448 aa8.74□□□□□ -1.01
HDAC3-211ENST00000491581 H7C0C1 242 aa8.74□□□□□ -1.01
HDAC3-211ENST00000491581 KMOO15229 486 aa8.74□□□□□ -1.01
HDAC3-211ENST00000491581 POP7O75817 140 aaKnown RBP8.74□□□□□ -1.01
HDAC3-211ENST00000491581 RASSF9O75901 435 aa8.74□□□□□ -1.01
HDAC3-211ENST00000491581 UBXN7O94888 489 aa8.74□□□□□ -1.01
HDAC3-211ENST00000491581 VIPP01282 170 aa8.74□□□□□ -1.01
HDAC3-211ENST00000491581 TPM3P06753 285 aa8.74□□□□□ -1.01
HDAC3-211ENST00000491581 ATP5OP48047 213 aa8.74□□□□□ -1.01
HDAC3-211ENST00000491581 DCDC1P59894 354 aa8.74□□□□□ -1.01
HDAC3-211ENST00000491581 RPS18P62269 152 aaKnown RBP8.74□□□□□ -1.01
HDAC3-211ENST00000491581 TRA2AQ13595 282 aaKnown RBP eCLIP8.74□□□□□ -1.01
HDAC3-211ENST00000491581 DEFB109BQ30KR1 87 aa8.74□□□□□ -1.01
HDAC3-211ENST00000491581 ODF2Q5BJF6 829 aa8.74□□□□□ -1.01
HDAC3-211ENST00000491581 TFDP3Q5H9I0 405 aa8.74□□□□□ -1.01
HDAC3-211ENST00000491581 FNBP1LQ5T0N5 605 aa8.74□□□□□ -1.01
HDAC3-211ENST00000491581 TMEM164Q5U3C3 297 aa8.74□□□□□ -1.01
HDAC3-211ENST00000491581 LRRC38Q5VT99 294 aa8.74□□□□□ -1.01
HDAC3-211ENST00000491581 IRGCQ6NXR0 463 aa8.74□□□□□ -1.01
HDAC3-211ENST00000491581 FAM199XQ6PEV8 388 aaPredicted RBP8.74□□□□□ -1.01
HDAC3-211ENST00000491581 TMEM220Q6QAJ8 160 aa8.74□□□□□ -1.01
HDAC3-211ENST00000491581 WDR74Q6RFH5 385 aaPredicted RBP8.74□□□□□ -1.01
HDAC3-211ENST00000491581 NAPRTQ6XQN6 538 aa8.74□□□□□ -1.01
HDAC3-211ENST00000491581 GLT6D1Q7Z4J2 308 aa8.74□□□□□ -1.01
HDAC3-211ENST00000491581 GAS2L3Q86XJ1 694 aa8.74□□□□□ -1.01
HDAC3-211ENST00000491581 TRIM48Q8IWZ4 208 aa8.74□□□□□ -1.01
HDAC3-211ENST00000491581 KATNAL2Q8IYT4 538 aa8.74□□□□□ -1.01
HDAC3-211ENST00000491581 ACTL9Q8TC94 416 aa8.74□□□□□ -1.01
HDAC3-211ENST00000491581 P3H4Q92791 437 aa8.74□□□□□ -1.01
HDAC3-211ENST00000491581 TMEM159Q96B96 161 aa8.74□□□□□ -1.01
HDAC3-211ENST00000491581 WBP1Q96G27 269 aa8.74□□□□□ -1.01
HDAC3-211ENST00000491581 DESI2Q9BSY9 194 aa8.74□□□□□ -1.01
HDAC3-211ENST00000491581 ZSCAN5AQ9BUG6 496 aa8.74□□□□□ -1.01
HDAC3-211ENST00000491581 DDA1Q9BW61 102 aa8.74□□□□□ -1.01
HDAC3-211ENST00000491581 WWP1Q9H0M0 922 aa8.74□□□□□ -1.01
HDAC3-211ENST00000491581 OCEL1Q9H607 264 aa8.74□□□□□ -1.01
HDAC3-211ENST00000491581 SLC40A1Q9NP59 571 aa8.74□□□□□ -1.01
HDAC3-211ENST00000491581 STARD5Q9NSY2 213 aa8.74□□□□□ -1.01
HDAC3-211ENST00000491581 DDX56Q9NY93 547 aaKnown RBP8.74□□□□□ -1.01
HDAC3-211ENST00000491581 FAM153AQ9UHL3 310 aa8.74□□□□□ -1.01
HDAC3-211ENST00000491581 MN1Q10571 1320 aaPredicted RBP8.74□□□□□ -1.01
HDAC3-211ENST00000491581 ZNF462Q96JM2 2506 aa8.73□□□□□ -1.01
HDAC3-211ENST00000491581 KIR2DS5A0A0G2JLQ3 304 aa8.73□□□□□ -1.01
HDAC3-211ENST00000491581 A0A0G2JNG1 304 aa8.73□□□□□ -1.01
HDAC3-211ENST00000491581 GLYATL1P3A0A0U1RQE8 302 aa8.73□□□□□ -1.01
HDAC3-211ENST00000491581 GRID2IPA4D2P6 1211 aa8.73□□□□□ -1.01
HDAC3-211ENST00000491581 B4E171 279 aa8.73□□□□□ -1.01
HDAC3-211ENST00000491581 KIR2DS3K7RE56 304 aa8.73□□□□□ -1.01
HDAC3-211ENST00000491581 POLR1CO15160 346 aaPredicted RBP8.73□□□□□ -1.01
HDAC3-211ENST00000491581 PSTPIP1O43586 416 aa8.73□□□□□ -1.01
HDAC3-211ENST00000491581 DNAJB5O75953 348 aa8.73□□□□□ -1.01
HDAC3-211ENST00000491581 KIAA0754O94854 1291 aa8.73□□□□□ -1.01
HDAC3-211ENST00000491581 ZRANB2O95218 330 aaKnown RBP eCLIP8.73□□□□□ -1.01
HDAC3-211ENST00000491581 LCA5LO95447 670 aa8.73□□□□□ -1.01
HDAC3-211ENST00000491581 DLGAP3O95886 979 aa8.73□□□□□ -1.01
HDAC3-211ENST00000491581 C9P02748 559 aa8.73□□□□□ -1.01
HDAC3-211ENST00000491581 PYGLP06737 847 aa8.73□□□□□ -1.01
HDAC3-211ENST00000491581 POLBP06746 335 aa8.73□□□□□ -1.01
HDAC3-211ENST00000491581 TPM1P09493 284 aa8.73□□□□□ -1.01
HDAC3-211ENST00000491581 EBLN1P0CF75 366 aa8.73□□□□□ -1.01
HDAC3-211ENST00000491581 PYGMP11217 842 aa8.73□□□□□ -1.01
HDAC3-211ENST00000491581 FOLR1P15328 257 aa8.73□□□□□ -1.01
HDAC3-211ENST00000491581 AMD1P17707 334 aa8.73□□□□□ -1.01
HDAC3-211ENST00000491581 TPH1P17752 444 aa8.73□□□□□ -1.01
HDAC3-211ENST00000491581 XRCC1P18887 633 aaPredicted RBP8.73□□□□□ -1.01
HDAC3-211ENST00000491581 SPAM1P38567 509 aa8.73□□□□□ -1.01
HDAC3-211ENST00000491581 TSPAN7P41732 249 aa8.73□□□□□ -1.01
HDAC3-211ENST00000491581 SLC1A1P43005 524 aa8.73□□□□□ -1.01
HDAC3-211ENST00000491581 CLCNKAP51800 687 aa8.73□□□□□ -1.01
HDAC3-211ENST00000491581 ZNF75DP51815 510 aa8.73□□□□□ -1.01
HDAC3-211ENST00000491581 POLE2P56282 527 aa8.73□□□□□ -1.01
HDAC3-211ENST00000491581 MSLNQ13421 630 aaPredicted RBP8.73□□□□□ -1.01
HDAC3-211ENST00000491581 PEX6Q13608 980 aa8.73□□□□□ -1.01
HDAC3-211ENST00000491581 KIR2DS5Q14953 304 aa8.73□□□□□ -1.01
HDAC3-211ENST00000491581 TCEAL1Q15170 157 aa8.73□□□□□ -1.01
HDAC3-211ENST00000491581 IGFBP7Q16270 282 aa8.73□□□□□ -1.01
HDAC3-211ENST00000491581 RPE65Q16518 533 aa8.73□□□□□ -1.01
HDAC3-211ENST00000491581 PPP2R5EQ16537 467 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms