RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 CST8O60676 142 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 ATP9AO75110 1047 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 PEX11AO75192 247 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 TBX10O75333 385 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 ENTPD5O75356 428 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 SPAG7O75391 227 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 MOSPD3O75425 235 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 PMPCBO75439 489 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 ZNF189O75820 626 aaPredicted RBP2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 CIB2O75838 187 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 KRT38O76015 456 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 TM7SF2O76062 418 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 UBXN7O94888 489 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 RTN3O95197 1032 aaPredicted RBP2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 STBD1O95210 358 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 LSM8O95777 96 aaKnown RBP2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 TRUB2O95900 331 aaKnown RBP2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 MT-CO3P00414 261 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 GH1P01241 217 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 PIGRP01833 764 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 HLA-DRAP01903 254 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 CRYABP02511 175 aaKnown RBP2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 INHBAP08476 426 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 CHRM5P08912 532 aaPredicted RBP2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 LINGO3P0C6S8 592 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 TRIM49P0CI25 452 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 TRIM49CP0CI26 452 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 THRAP10827 490 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 VDRP11473 427 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 CETPP11597 493 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 MLNP12872 115 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 KRT10P13645 584 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 CD19P15391 556 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 TPH1P17752 444 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 VCLP18206 1134 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 KCNA3P22001 575 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 ACAT1P24752 427 aaKnown RBP2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 DNAJB1P25685 340 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 GCAP28676 217 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 EPHA3P29320 983 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 CRABP2P29373 138 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 SSTR1P30872 391 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 ATICP31939 592 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 GKP32189 559 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 ICAM3P32942 547 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 RFC1P35251 1148 aaPredicted RBP2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 CHKAP35790 457 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 ARL2P36404 184 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 HADHAP40939 763 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 PIK3CAP42336 1068 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 CDKN2BP42772 138 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 SSR1P43307 286 aaKnown RBP2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 NR4A2P43354 598 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 GABRB2P47870 512 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 POLD2P49005 469 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 MARCKSL1P49006 195 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 LIG4P49917 911 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 GATMP50440 423 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 CDK7P50613 346 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 NEK2P51955 445 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 OAZ1P54368 228 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 PRKAA2P54646 552 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 VCPP55072 806 aaKnown RBP2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 POLE2P56282 527 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 TAS2R40P59535 323 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 GPX6P59796 221 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 SNAP25P60880 206 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 RPL7AP62424 266 aaKnown RBP2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 CDK16Q00536 496 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 CNTN2Q02246 1040 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 PPARDQ03181 441 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 DEUP1Q05D60 604 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 WASHC5Q12768 1159 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 ASPHQ12797 758 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 TRPC3Q13507 836 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 CUL2Q13617 745 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 MXD4Q14582 209 aaPredicted RBP2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 RBMS2Q15434 407 aaKnown RBP2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 TRIP13Q15645 432 aaPredicted RBP2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 OASLQ15646 514 aaKnown RBP2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 STXBP2Q15833 593 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 KYAT1Q16773 422 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 TRMT5Q32P41 509 aaKnown RBP2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 DNAL1Q4LDG9 190 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 C4orf46Q504U0 113 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 SH2D4BQ5SQS7 431 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 FNBP1LQ5T0N5 605 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 CERCAMQ5T4B2 595 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 RNASEH2BQ5TBB1 312 aaKnown RBP2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 ARHGEF16Q5VV41 709 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 AP1ARQ63HQ0 302 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 AWAT2Q6E213 333 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 DARS2Q6PI48 645 aaKnown RBP2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 TMEM270Q6UE05 265 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 MFSD7Q6UXD7 560 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 CLEC9AQ6UXN8 241 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 RANBP10Q6VN20 620 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 KYAT3Q6YP21 454 aaKnown RBP2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 RINLQ6ZS11 566 aa2.07□□□□□ -2.08
SNRNP40-207ENST00000491106 BBS12Q6ZW61 710 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms