RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 RPL10P27635 214 aaKnown RBP13.38□□□□□ -0.27
EXOSC3-207ENST00000490516 TPI1P60174 286 aa13.38□□□□□ -0.27
EXOSC3-207ENST00000490516 NOMO3P69849 1222 aa13.38□□□□□ -0.27
EXOSC3-207ENST00000490516 IL10RBQ08334 325 aa13.38□□□□□ -0.27
EXOSC3-207ENST00000490516 Q0VFX4 171 aa13.38□□□□□ -0.27
EXOSC3-207ENST00000490516 CDSNQ15517 529 aa13.38□□□□□ -0.27
EXOSC3-207ENST00000490516 CRTC3Q6UUV7 619 aa13.38□□□□□ -0.27
EXOSC3-207ENST00000490516 GBP6Q6ZN66 633 aa13.38□□□□□ -0.27
EXOSC3-207ENST00000490516 KMT5CQ86Y97 462 aa13.38□□□□□ -0.27
EXOSC3-207ENST00000490516 CEP97Q8IW35 865 aa13.38□□□□□ -0.27
EXOSC3-207ENST00000490516 PIH1D2Q8WWB5 315 aa13.38□□□□□ -0.27
EXOSC3-207ENST00000490516 NELFBQ8WX92 580 aa13.38□□□□□ -0.27
EXOSC3-207ENST00000490516 NUDCD1Q96RS6 583 aa13.38□□□□□ -0.27
EXOSC3-207ENST00000490516 WDR24Q96S15 920 aa13.38□□□□□ -0.27
EXOSC3-207ENST00000490516 FAM207AQ9NSI2 230 aaPredicted RBP13.38□□□□□ -0.27
EXOSC3-207ENST00000490516 TRIM10Q9UDY6 481 aa13.38□□□□□ -0.27
EXOSC3-207ENST00000490516 SH3BGRL2Q9UJC5 107 aa13.38□□□□□ -0.27
EXOSC3-207ENST00000490516 DNAJC16Q9Y2G8 782 aa13.38□□□□□ -0.27
EXOSC3-207ENST00000490516 PPIL1Q9Y3C6 166 aa13.38□□□□□ -0.27
EXOSC3-207ENST00000490516 PCDHGB6Q9Y5F9 930 aa13.38□□□□□ -0.27
EXOSC3-207ENST00000490516 ADGRG1Q9Y653 693 aa13.38□□□□□ -0.27
EXOSC3-207ENST00000490516 ANKRD12Q6UB98 2062 aa13.38□□□□□ -0.27
EXOSC3-207ENST00000490516 UBA6A0AVT1 1052 aaPredicted RBP13.37□□□□□ -0.27
EXOSC3-207ENST00000490516 K7ELQ4 463 aaPredicted RBP13.37□□□□□ -0.27
EXOSC3-207ENST00000490516 PCDH17O14917 1159 aa13.37□□□□□ -0.27
EXOSC3-207ENST00000490516 KLF7O75840 302 aaPredicted RBP13.37□□□□□ -0.27
EXOSC3-207ENST00000490516 LSM8O95777 96 aaKnown RBP13.37□□□□□ -0.27
EXOSC3-207ENST00000490516 GNA14O95837 355 aa13.37□□□□□ -0.27
EXOSC3-207ENST00000490516 MMEP08473 750 aa13.37□□□□□ -0.27
EXOSC3-207ENST00000490516 TDGF1P3P51864 188 aa13.37□□□□□ -0.27
EXOSC3-207ENST00000490516 STC1P52823 247 aa13.37□□□□□ -0.27
EXOSC3-207ENST00000490516 DRG2P55039 364 aaKnown RBP13.37□□□□□ -0.27
EXOSC3-207ENST00000490516 SOX8P57073 446 aa13.37□□□□□ -0.27
EXOSC3-207ENST00000490516 BPIFB4P59827 614 aa13.37□□□□□ -0.27
EXOSC3-207ENST00000490516 ASIC2Q16515 512 aa13.37□□□□□ -0.27
EXOSC3-207ENST00000490516 EXOC3L4Q17RC7 722 aa13.37□□□□□ -0.27
EXOSC3-207ENST00000490516 INSCQ1MX18 579 aa13.37□□□□□ -0.27
EXOSC3-207ENST00000490516 TDRD12Q587J7 1177 aaKnown RBP13.37□□□□□ -0.27
EXOSC3-207ENST00000490516 DNTTIP2Q5QJE6 756 aaKnown RBP13.37□□□□□ -0.27
EXOSC3-207ENST00000490516 ARMC12Q5T9G4 340 aa13.37□□□□□ -0.27
EXOSC3-207ENST00000490516 FBXO38Q6PIJ6 1188 aa13.37□□□□□ -0.27
EXOSC3-207ENST00000490516 RPTNQ6XPR3 784 aa13.37□□□□□ -0.27
EXOSC3-207ENST00000490516 OR8K5Q8NH50 307 aa13.37□□□□□ -0.27
EXOSC3-207ENST00000490516 SMARCE1Q969G3 411 aa13.37□□□□□ -0.27
EXOSC3-207ENST00000490516 CXorf40BQ96DE9 158 aa13.37□□□□□ -0.27
EXOSC3-207ENST00000490516 IP6K3Q96PC2 410 aa13.37□□□□□ -0.27
EXOSC3-207ENST00000490516 GBP5Q96PP8 586 aa13.37□□□□□ -0.27
EXOSC3-207ENST00000490516 OR2AG1Q9H205 316 aa13.37□□□□□ -0.27
EXOSC3-207ENST00000490516 CARD9Q9H257 536 aa13.37□□□□□ -0.27
EXOSC3-207ENST00000490516 SEMA3GQ9NS98 782 aa13.37□□□□□ -0.27
EXOSC3-207ENST00000490516 P4HTMQ9NXG6 502 aa13.37□□□□□ -0.27
EXOSC3-207ENST00000490516 CTNND2Q9UQB3 1225 aa13.37□□□□□ -0.27
EXOSC3-207ENST00000490516 TLCD2A6NGC4 264 aa13.36□□□□□ -0.27
EXOSC3-207ENST00000490516 TMEM200CA6NKL6 621 aa13.36□□□□□ -0.27
EXOSC3-207ENST00000490516 PEX12O00623 359 aa13.36□□□□□ -0.27
EXOSC3-207ENST00000490516 SMC2O95347 1197 aa13.36□□□□□ -0.27
EXOSC3-207ENST00000490516 RFC1P35251 1148 aaPredicted RBP13.36□□□□□ -0.27
EXOSC3-207ENST00000490516 PBX1P40424 430 aa13.36□□□□□ -0.27
EXOSC3-207ENST00000490516 MAXP61244 160 aa13.36□□□□□ -0.27
EXOSC3-207ENST00000490516 SSPNQ14714 243 aa13.36□□□□□ -0.27
EXOSC3-207ENST00000490516 B3GNTL1Q67FW5 361 aaPredicted RBP13.36□□□□□ -0.27
EXOSC3-207ENST00000490516 ZNF324BQ6AW86 544 aaPredicted RBP13.36□□□□□ -0.27
EXOSC3-207ENST00000490516 FCRL6Q6DN72 434 aa13.36□□□□□ -0.27
EXOSC3-207ENST00000490516 XKRXQ6PP77 449 aa13.36□□□□□ -0.27
EXOSC3-207ENST00000490516 ABRAXAS1Q6UWZ7 409 aa13.36□□□□□ -0.27
EXOSC3-207ENST00000490516 TRIM72Q6ZMU5 477 aa13.36□□□□□ -0.27
EXOSC3-207ENST00000490516 NOP9Q86U38 636 aaKnown RBP13.36□□□□□ -0.27
EXOSC3-207ENST00000490516 NPWQ8N729 165 aa13.36□□□□□ -0.27
EXOSC3-207ENST00000490516 BCORP1Q8N888 145 aa13.36□□□□□ -0.27
EXOSC3-207ENST00000490516 CCDC34Q96HJ3 373 aa13.36□□□□□ -0.27
EXOSC3-207ENST00000490516 MDFIQ99750 246 aa13.36□□□□□ -0.27
EXOSC3-207ENST00000490516 C11orf70Q9BRQ4 267 aa13.36□□□□□ -0.27
EXOSC3-207ENST00000490516 TLR10Q9BXR5 811 aa13.36□□□□□ -0.27
EXOSC3-207ENST00000490516 GPATCH2LQ9NWQ4 482 aa13.36□□□□□ -0.27
EXOSC3-207ENST00000490516 PADI2Q9Y2J8 665 aa13.36□□□□□ -0.27
EXOSC3-207ENST00000490516 BHMG1C9JSJ3 638 aaPredicted RBP13.35□□□□□ -0.27
EXOSC3-207ENST00000490516 CCP110O43303 1012 aa13.35□□□□□ -0.27
EXOSC3-207ENST00000490516 ALOX12BO75342 701 aa13.35□□□□□ -0.27
EXOSC3-207ENST00000490516 MTA2O94776 668 aa13.35□□□□□ -0.27
EXOSC3-207ENST00000490516 CLDN7O95471 211 aa13.35□□□□□ -0.27
EXOSC3-207ENST00000490516 ATXN8OSP0DMR3 200 aa13.35□□□□□ -0.27
EXOSC3-207ENST00000490516 ZNF30P17039 623 aa13.35□□□□□ -0.27
EXOSC3-207ENST00000490516 ZNF7P17097 686 aaPredicted RBP13.35□□□□□ -0.27
EXOSC3-207ENST00000490516 GPD1P21695 349 aa13.35□□□□□ -0.27
EXOSC3-207ENST00000490516 ARCN1P48444 511 aaKnown RBP13.35□□□□□ -0.27
EXOSC3-207ENST00000490516 FOXL2P58012 376 aa13.35□□□□□ -0.27
EXOSC3-207ENST00000490516 ADORA2A-AS1P86434 159 aa13.35□□□□□ -0.27
EXOSC3-207ENST00000490516 TMTC4Q5T4D3 741 aa13.35□□□□□ -0.27
EXOSC3-207ENST00000490516 PLEKHA7Q6IQ23 1121 aa13.35□□□□□ -0.27
EXOSC3-207ENST00000490516 MTFR2Q6P444 385 aa13.35□□□□□ -0.27
EXOSC3-207ENST00000490516 WDR59Q6PJI9 974 aa13.35□□□□□ -0.27
EXOSC3-207ENST00000490516 IGFL2Q6UWQ7 119 aa13.35□□□□□ -0.27
EXOSC3-207ENST00000490516 GFRALQ6UXV0 394 aa13.35□□□□□ -0.27
EXOSC3-207ENST00000490516 TGIF2LYQ8IUE0 185 aa13.35□□□□□ -0.27
EXOSC3-207ENST00000490516 TMEM151BQ8IW70 566 aa13.35□□□□□ -0.27
EXOSC3-207ENST00000490516 RBM12BQ8IXT5 1001 aaKnown RBP13.35□□□□□ -0.27
EXOSC3-207ENST00000490516 GPR150Q8NGU9 434 aa13.35□□□□□ -0.27
EXOSC3-207ENST00000490516 SLC30A5Q8TAD4 765 aa13.35□□□□□ -0.27
EXOSC3-207ENST00000490516 MTFMTQ96DP5 389 aaKnown RBP13.35□□□□□ -0.27
EXOSC3-207ENST00000490516 PPM1MQ96MI6 270 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms