RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 TRABDQ9H4I3 376 aa10.23□□□□□ -0.77
TTC28-207ENST00000490475 GEMIN8Q9NWZ8 242 aaKnown RBP10.23□□□□□ -0.77
TTC28-207ENST00000490475 KLHL8Q9P2G9 620 aaPredicted RBP10.23□□□□□ -0.77
TTC28-207ENST00000490475 ST14Q9Y5Y6 855 aa10.23□□□□□ -0.77
TTC28-207ENST00000490475 B3GALT1Q9Y5Z6 326 aa10.23□□□□□ -0.77
TTC28-207ENST00000490475 MYO18BQ8IUG5 2567 aa10.22□□□□□ -0.77
TTC28-207ENST00000490475 GOLGA6L9A6NEM1 432 aa10.22□□□□□ -0.77
TTC28-207ENST00000490475 EFCAB7A8K855 629 aa10.22□□□□□ -0.77
TTC28-207ENST00000490475 KCNN4O15554 427 aa10.22□□□□□ -0.77
TTC28-207ENST00000490475 ZSCAN12O43309 604 aa10.22□□□□□ -0.77
TTC28-207ENST00000490475 PMPCBO75439 489 aa10.22□□□□□ -0.77
TTC28-207ENST00000490475 WISP1O95388 367 aa10.22□□□□□ -0.77
TTC28-207ENST00000490475 ATP1A1P05023 1023 aaKnown RBP10.22□□□□□ -0.77
TTC28-207ENST00000490475 ANKRD34CP0C6C1 535 aa10.22□□□□□ -0.77
TTC28-207ENST00000490475 ACP5P13686 325 aa10.22□□□□□ -0.77
TTC28-207ENST00000490475 XRCC1P18887 633 aaPredicted RBP10.22□□□□□ -0.77
TTC28-207ENST00000490475 CXCR5P32302 372 aa10.22□□□□□ -0.77
TTC28-207ENST00000490475 CSF2RBP32927 897 aa10.22□□□□□ -0.77
TTC28-207ENST00000490475 CDK18Q07002 472 aa10.22□□□□□ -0.77
TTC28-207ENST00000490475 ABHD18Q0P651 414 aa10.22□□□□□ -0.77
TTC28-207ENST00000490475 MAP7Q14244 749 aa10.22□□□□□ -0.77
TTC28-207ENST00000490475 GALNT3Q14435 633 aa10.22□□□□□ -0.77
TTC28-207ENST00000490475 TBR1Q16650 682 aa10.22□□□□□ -0.77
TTC28-207ENST00000490475 NKAIN2Q5VXU1 208 aa10.22□□□□□ -0.77
TTC28-207ENST00000490475 RFLNAQ6ZTI6 216 aa10.22□□□□□ -0.77
TTC28-207ENST00000490475 TRIM74Q86UV6 250 aa10.22□□□□□ -0.77
TTC28-207ENST00000490475 VASH2Q86V25 355 aa10.22□□□□□ -0.77
TTC28-207ENST00000490475 SLC13A5Q86YT5 568 aaPredicted RBP10.22□□□□□ -0.77
TTC28-207ENST00000490475 TRIM48Q8IWZ4 208 aa10.22□□□□□ -0.77
TTC28-207ENST00000490475 EXD3Q8N9H8 876 aa10.22□□□□□ -0.77
TTC28-207ENST00000490475 TRIM58Q8NG06 486 aa10.22□□□□□ -0.77
TTC28-207ENST00000490475 DTX3LQ8TDB6 740 aa10.22□□□□□ -0.77
TTC28-207ENST00000490475 BRSK1Q8TDC3 778 aa10.22□□□□□ -0.77
TTC28-207ENST00000490475 NCSTNQ92542 709 aa10.22□□□□□ -0.77
TTC28-207ENST00000490475 SLC45A3Q96JT2 553 aa10.22□□□□□ -0.77
TTC28-207ENST00000490475 PLEKHG4BQ96PX9 1271 aa10.22□□□□□ -0.77
TTC28-207ENST00000490475 TRIB3Q96RU7 358 aa10.22□□□□□ -0.77
TTC28-207ENST00000490475 VAT1Q99536 393 aa10.22□□□□□ -0.77
TTC28-207ENST00000490475 TIMM29Q9BSF4 260 aa10.22□□□□□ -0.77
TTC28-207ENST00000490475 GPR63Q9BZJ6 419 aa10.22□□□□□ -0.77
TTC28-207ENST00000490475 ZCCHC2Q9C0B9 1178 aaKnown RBP10.22□□□□□ -0.77
TTC28-207ENST00000490475 POT1Q9NUX5 634 aa10.22□□□□□ -0.77
TTC28-207ENST00000490475 CPNE7Q9UBL6 633 aa10.22□□□□□ -0.77
TTC28-207ENST00000490475 TBC1D29Q9UFV1 150 aa10.22□□□□□ -0.77
TTC28-207ENST00000490475 TRHDEQ9UKU6 1024 aa10.22□□□□□ -0.77
TTC28-207ENST00000490475 CNOT6Q9ULM6 557 aaKnown RBP10.22□□□□□ -0.77
TTC28-207ENST00000490475 KLHL33A6NCF5 533 aa10.21□□□□□ -0.77
TTC28-207ENST00000490475 A6NCN8 305 aa10.21□□□□□ -0.77
TTC28-207ENST00000490475 USP27XA6NNY8 438 aa10.21□□□□□ -0.77
TTC28-207ENST00000490475 FADS2P1A8MWK0 482 aa10.21□□□□□ -0.77
TTC28-207ENST00000490475 CHUKO15111 745 aa10.21□□□□□ -0.77
TTC28-207ENST00000490475 POLR1CO15160 346 aaPredicted RBP10.21□□□□□ -0.77
TTC28-207ENST00000490475 RAD1O60671 282 aa10.21□□□□□ -0.77
TTC28-207ENST00000490475 SNX2O60749 519 aa10.21□□□□□ -0.77
TTC28-207ENST00000490475 NDST3O95803 873 aa10.21□□□□□ -0.77
TTC28-207ENST00000490475 VIPP01282 170 aa10.21□□□□□ -0.77
TTC28-207ENST00000490475 EPOP01588 193 aa10.21□□□□□ -0.77
TTC28-207ENST00000490475 PIRTP0C851 137 aa10.21□□□□□ -0.77
TTC28-207ENST00000490475 CCR10P46092 362 aa10.21□□□□□ -0.77
TTC28-207ENST00000490475 NFATC2Q13469 925 aa10.21□□□□□ -0.77
TTC28-207ENST00000490475 GTF2H3Q13889 308 aa10.21□□□□□ -0.77
TTC28-207ENST00000490475 INSCQ1MX18 579 aa10.21□□□□□ -0.77
TTC28-207ENST00000490475 ANKRD20A2Q5SQ80 823 aa10.21□□□□□ -0.77
TTC28-207ENST00000490475 SEL1L2Q5TEA6 688 aa10.21□□□□□ -0.77
TTC28-207ENST00000490475 ANKRD20A1Q5TYW2 823 aa10.21□□□□□ -0.77
TTC28-207ENST00000490475 ANKRD20A3Q5VUR7 823 aa10.21□□□□□ -0.77
TTC28-207ENST00000490475 KLHL35Q6PF15 583 aa10.21□□□□□ -0.77
TTC28-207ENST00000490475 WASH2PQ6VEQ5 465 aa10.21□□□□□ -0.77
TTC28-207ENST00000490475 TMC3Q7Z5M5 1100 aa10.21□□□□□ -0.77
TTC28-207ENST00000490475 LRRTM4Q86VH4 590 aa10.21□□□□□ -0.77
TTC28-207ENST00000490475 CDKL3Q8IVW4 592 aaPredicted RBP10.21□□□□□ -0.77
TTC28-207ENST00000490475 ESX1Q8N693 406 aa10.21□□□□□ -0.77
TTC28-207ENST00000490475 BMPERQ8N8U9 685 aa10.21□□□□□ -0.77
TTC28-207ENST00000490475 FAM71DQ8N9W8 422 aa10.21□□□□□ -0.77
TTC28-207ENST00000490475 TTC13Q8NBP0 860 aa10.21□□□□□ -0.77
TTC28-207ENST00000490475 SLC35B2Q8TB61 432 aa10.21□□□□□ -0.77
TTC28-207ENST00000490475 CCDC110Q8TBZ0 833 aa10.21□□□□□ -0.77
TTC28-207ENST00000490475 PTCD2Q8WV60 388 aaKnown RBP10.21□□□□□ -0.77
TTC28-207ENST00000490475 C1orf54Q8WWF1 131 aa10.21□□□□□ -0.77
TTC28-207ENST00000490475 ATG4AQ8WYN0 398 aa10.21□□□□□ -0.77
TTC28-207ENST00000490475 GLYATL1Q969I3 302 aa10.21□□□□□ -0.77
TTC28-207ENST00000490475 RTP4Q96DX8 246 aa10.21□□□□□ -0.77
TTC28-207ENST00000490475 OXNAD1Q96HP4 312 aaPredicted RBP10.21□□□□□ -0.77
TTC28-207ENST00000490475 TTC25Q96NG3 672 aa10.21□□□□□ -0.77
TTC28-207ENST00000490475 VPS35Q96QK1 796 aa10.21□□□□□ -0.77
TTC28-207ENST00000490475 FCRL5Q96RD9 977 aa10.21□□□□□ -0.77
TTC28-207ENST00000490475 WDR24Q96S15 920 aa10.21□□□□□ -0.77
TTC28-207ENST00000490475 AGAP2Q99490 1192 aa10.21□□□□□ -0.77
TTC28-207ENST00000490475 FERMT1Q9BQL6 677 aa10.21□□□□□ -0.77
TTC28-207ENST00000490475 TMEM121Q9BTD3 319 aa10.21□□□□□ -0.77
TTC28-207ENST00000490475 SLC12A9Q9BXP2 914 aa10.21□□□□□ -0.77
TTC28-207ENST00000490475 OSGEPL1Q9H4B0 414 aa10.21□□□□□ -0.77
TTC28-207ENST00000490475 GPN2Q9H9Y4 310 aaPredicted RBP10.21□□□□□ -0.77
TTC28-207ENST00000490475 WASH6PQ9NQA3 447 aa10.21□□□□□ -0.77
TTC28-207ENST00000490475 HACD3Q9P035 362 aa10.21□□□□□ -0.77
TTC28-207ENST00000490475 FAM153AQ9UHL3 310 aa10.21□□□□□ -0.77
TTC28-207ENST00000490475 RSPH14Q9UHP6 348 aa10.21□□□□□ -0.77
TTC28-207ENST00000490475 PILRAQ9UKJ1 303 aa10.21□□□□□ -0.77
TTC28-207ENST00000490475 PYCARDQ9ULZ3 195 aa10.21□□□□□ -0.77
TTC28-207ENST00000490475 KCNK6Q9Y257 313 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms