RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 TRIM48Q8IWZ4 208 aa19.44■□□□□ 0.7
SMC4-222ENST00000490207 ZNF398Q8TD17 642 aa19.44■□□□□ 0.7
SMC4-222ENST00000490207 UBE2Q2Q8WVN8 375 aa19.44■□□□□ 0.7
SMC4-222ENST00000490207 ATG4AQ8WYN0 398 aa19.44■□□□□ 0.7
SMC4-222ENST00000490207 LRRC40Q9H9A6 602 aa19.44■□□□□ 0.7
SMC4-222ENST00000490207 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.44■□□□□ 0.7
SMC4-222ENST00000490207 LILRA5A6NI73 299 aa19.43■□□□□ 0.7
SMC4-222ENST00000490207 NVLO15381 856 aaKnown RBP19.43■□□□□ 0.7
SMC4-222ENST00000490207 SRP72O76094 671 aaKnown RBP19.43■□□□□ 0.7
SMC4-222ENST00000490207 METTL18O95568 372 aa19.43■□□□□ 0.7
SMC4-222ENST00000490207 VIPP01282 170 aa19.43■□□□□ 0.7
SMC4-222ENST00000490207 MSH3P20585 1137 aa19.43■□□□□ 0.7
SMC4-222ENST00000490207 IDSP22304 550 aa19.43■□□□□ 0.7
SMC4-222ENST00000490207 MPSTP25325 297 aa19.43■□□□□ 0.7
SMC4-222ENST00000490207 ZNF140P52738 457 aaPredicted RBP19.43■□□□□ 0.7
SMC4-222ENST00000490207 CTSCP53634 463 aa19.43■□□□□ 0.7
SMC4-222ENST00000490207 MSLNQ13421 630 aaPredicted RBP19.43■□□□□ 0.7
SMC4-222ENST00000490207 SLC13A5Q86YT5 568 aaPredicted RBP19.43■□□□□ 0.7
SMC4-222ENST00000490207 RASGEF1AQ8N9B8 481 aa19.43■□□□□ 0.7
SMC4-222ENST00000490207 OR13C4Q8NGS5 318 aa19.43■□□□□ 0.7
SMC4-222ENST00000490207 ALS2CR12Q96Q35 445 aa19.43■□□□□ 0.7
SMC4-222ENST00000490207 TBC1D10AQ9BXI6 508 aa19.43■□□□□ 0.7
SMC4-222ENST00000490207 ASB8Q9H765 288 aa19.43■□□□□ 0.7
SMC4-222ENST00000490207 ARNT2Q9HBZ2 717 aa19.43■□□□□ 0.7
SMC4-222ENST00000490207 LZTFL1Q9NQ48 299 aa19.43■□□□□ 0.7
SMC4-222ENST00000490207 ACSL6Q9UKU0 697 aa19.43■□□□□ 0.7
SMC4-222ENST00000490207 PRAMEF33A0A0G2JMD5 474 aa19.42■□□□□ 0.7
SMC4-222ENST00000490207 OR2AG2A6NM03 316 aa19.42■□□□□ 0.7
SMC4-222ENST00000490207 PRAMEF10O60809 474 aa19.42■□□□□ 0.7
SMC4-222ENST00000490207 XRCC1P18887 633 aaPredicted RBP19.42■□□□□ 0.7
SMC4-222ENST00000490207 RPL10P27635 214 aaKnown RBP19.42■□□□□ 0.7
SMC4-222ENST00000490207 CSTF2P33240 577 aaKnown RBP eCLIP19.42■□□□□ 0.7
SMC4-222ENST00000490207 DRG2P55039 364 aaKnown RBP19.42■□□□□ 0.7
SMC4-222ENST00000490207 CLN3Q13286 438 aa19.42■□□□□ 0.7
SMC4-222ENST00000490207 RPS6KA1Q15418 735 aa19.42■□□□□ 0.7
SMC4-222ENST00000490207 MEI1Q5TIA1 1274 aa19.42■□□□□ 0.7
SMC4-222ENST00000490207 AGAP9Q5VTM2 703 aa19.42■□□□□ 0.7
SMC4-222ENST00000490207 TMEM220Q6QAJ8 160 aa19.42■□□□□ 0.7
SMC4-222ENST00000490207 AMZ2Q86W34 360 aa19.42■□□□□ 0.7
SMC4-222ENST00000490207 LRRC8AQ8IWT6 810 aa19.42■□□□□ 0.7
SMC4-222ENST00000490207 USP7Q93009 1102 aa19.42■□□□□ 0.7
SMC4-222ENST00000490207 RTP4Q96DX8 246 aa19.42■□□□□ 0.7
SMC4-222ENST00000490207 FRMD8P1Q9BZ68 369 aaPredicted RBP19.42■□□□□ 0.7
SMC4-222ENST00000490207 EPB41L1Q9H4G0 881 aa19.42■□□□□ 0.7
SMC4-222ENST00000490207 FOXJ2Q9P0K8 574 aa19.42■□□□□ 0.7
SMC4-222ENST00000490207 ZNF624Q9P2J8 865 aaPredicted RBP19.42■□□□□ 0.7
SMC4-222ENST00000490207 LIASO43766 372 aa19.41■□□□□ 0.7
SMC4-222ENST00000490207 KCNJ13O60928 360 aa19.41■□□□□ 0.7
SMC4-222ENST00000490207 AP2A1O95782 977 aa19.41■□□□□ 0.7
SMC4-222ENST00000490207 CCL4P13236 92 aa19.41■□□□□ 0.7
SMC4-222ENST00000490207 BRAFP15056 766 aa19.41■□□□□ 0.7
SMC4-222ENST00000490207 PBLDP30039 288 aaPredicted RBP19.41■□□□□ 0.7
SMC4-222ENST00000490207 HADHAP40939 763 aa19.41■□□□□ 0.7
SMC4-222ENST00000490207 SLC19A1P41440 591 aa19.41■□□□□ 0.7
SMC4-222ENST00000490207 CCZ1BP86790 482 aa19.41■□□□□ 0.7
SMC4-222ENST00000490207 CCZ1P86791 482 aaPredicted RBP19.41■□□□□ 0.7
SMC4-222ENST00000490207 TMPRSS15P98073 1019 aa19.41■□□□□ 0.7
SMC4-222ENST00000490207 XIAPP98170 497 aa19.41■□□□□ 0.7
SMC4-222ENST00000490207 DMPKQ09013 629 aa19.41■□□□□ 0.7
SMC4-222ENST00000490207 OASLQ15646 514 aaKnown RBP19.41■□□□□ 0.7
SMC4-222ENST00000490207 LONRF2Q1L5Z9 754 aa19.41■□□□□ 0.7
SMC4-222ENST00000490207 SNAP47Q5SQN1 464 aa19.41■□□□□ 0.7
SMC4-222ENST00000490207 WDR74Q6RFH5 385 aaPredicted RBP19.41■□□□□ 0.7
SMC4-222ENST00000490207 ABRAXAS1Q6UWZ7 409 aa19.41■□□□□ 0.7
SMC4-222ENST00000490207 WASH2PQ6VEQ5 465 aa19.41■□□□□ 0.7
SMC4-222ENST00000490207 ZNF662Q6ZS27 426 aa19.41■□□□□ 0.7
SMC4-222ENST00000490207 DET1Q7L5Y6 550 aa19.41■□□□□ 0.7
SMC4-222ENST00000490207 GPR155Q7Z3F1 870 aa19.41■□□□□ 0.7
SMC4-222ENST00000490207 TAB3Q8N5C8 712 aaPredicted RBP19.41■□□□□ 0.7
SMC4-222ENST00000490207 AGBL5Q8NDL9 886 aa19.41■□□□□ 0.7
SMC4-222ENST00000490207 NCSTNQ92542 709 aa19.41■□□□□ 0.7
SMC4-222ENST00000490207 C19orf43Q9BQ61 176 aa19.41■□□□□ 0.7
SMC4-222ENST00000490207 UCK1Q9HA47 277 aa19.41■□□□□ 0.7
SMC4-222ENST00000490207 CPNE5Q9HCH3 593 aa19.41■□□□□ 0.7
SMC4-222ENST00000490207 WASH6PQ9NQA3 447 aa19.41■□□□□ 0.7
SMC4-222ENST00000490207 POT1Q9NUX5 634 aa19.41■□□□□ 0.7
SMC4-222ENST00000490207 WDR70Q9NW82 654 aa19.41■□□□□ 0.7
SMC4-222ENST00000490207 CRLS1Q9UJA2 301 aa19.41■□□□□ 0.7
SMC4-222ENST00000490207 LOC400499M0QZD8 3231 aa19.41■□□□□ 0.7
SMC4-222ENST00000490207 OR52A4PA6NMU1 304 aa19.4■□□□□ 0.7
SMC4-222ENST00000490207 C9orf172C9J069 976 aa19.4■□□□□ 0.7
SMC4-222ENST00000490207 PSMD3O43242 534 aa19.4■□□□□ 0.7
SMC4-222ENST00000490207 LDB2O43679 373 aa19.4■□□□□ 0.7
SMC4-222ENST00000490207 NRDCO43847 1150 aa19.4■□□□□ 0.7
SMC4-222ENST00000490207 POP7O75817 140 aaKnown RBP19.4■□□□□ 0.7
SMC4-222ENST00000490207 LIPCP11150 499 aa19.4■□□□□ 0.7
SMC4-222ENST00000490207 ITGALP20701 1170 aa19.4■□□□□ 0.7
SMC4-222ENST00000490207 HALP42357 657 aa19.4■□□□□ 0.7
SMC4-222ENST00000490207 SEPT6Q14141 434 aa19.4■□□□□ 0.7
SMC4-222ENST00000490207 FNBP1LQ5T0N5 605 aa19.4■□□□□ 0.7
SMC4-222ENST00000490207 TMEM164Q5U3C3 297 aa19.4■□□□□ 0.7
SMC4-222ENST00000490207 TMEM26Q6ZUK4 368 aa19.4■□□□□ 0.7
SMC4-222ENST00000490207 ULK4Q96C45 1275 aa19.4■□□□□ 0.7
SMC4-222ENST00000490207 CXorf40BQ96DE9 158 aa19.4■□□□□ 0.7
SMC4-222ENST00000490207 ZNF514Q96K75 400 aaPredicted RBP19.4■□□□□ 0.7
SMC4-222ENST00000490207 DNAJC1Q96KC8 554 aaKnown RBP19.4■□□□□ 0.7
SMC4-222ENST00000490207 PDP2Q9P2J9 529 aa19.4■□□□□ 0.7
SMC4-222ENST00000490207 DNMT3AQ9Y6K1 912 aaPredicted RBP19.4■□□□□ 0.7
SMC4-222ENST00000490207 IGSF10Q6WRI0 2623 aa19.39■□□□□ 0.7
SMC4-222ENST00000490207 CACNA1GO43497 2377 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms