RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 ZNF7P17097 686 aaPredicted RBP17.19■□□□□ 0.34
ERCC3-207ENST00000490062 AKT1P31749 480 aa17.19■□□□□ 0.34
ERCC3-207ENST00000490062 ELK3P41970 407 aa17.19■□□□□ 0.34
ERCC3-207ENST00000490062 PLTPP55058 493 aa17.19■□□□□ 0.34
ERCC3-207ENST00000490062 TUBB4BP68371 445 aa17.19■□□□□ 0.34
ERCC3-207ENST00000490062 GUCY2DQ02846 1103 aa17.19■□□□□ 0.34
ERCC3-207ENST00000490062 C1orf61Q13536 156 aa17.19■□□□□ 0.34
ERCC3-207ENST00000490062 SEMA3AQ14563 771 aa17.19■□□□□ 0.34
ERCC3-207ENST00000490062 PUM1Q14671 1186 aaKnown RBP eCLIP17.19■□□□□ 0.345e-7■■■■■ 30.6
ERCC3-207ENST00000490062 TRADDQ15628 312 aa17.19■□□□□ 0.34
ERCC3-207ENST00000490062 LONRF1Q17RB8 773 aa17.19■□□□□ 0.34
ERCC3-207ENST00000490062 ZNF449Q6P9G9 518 aa17.19■□□□□ 0.34
ERCC3-207ENST00000490062 WASH2PQ6VEQ5 465 aa17.19■□□□□ 0.34
ERCC3-207ENST00000490062 CYS1Q717R9 158 aa17.19■□□□□ 0.34
ERCC3-207ENST00000490062 MARK2Q7KZI7 788 aaKnown RBP17.19■□□□□ 0.34
ERCC3-207ENST00000490062 TAS2R42Q7RTR8 314 aa17.19■□□□□ 0.34
ERCC3-207ENST00000490062 RELL1Q8IUW5 271 aa17.19■□□□□ 0.34
ERCC3-207ENST00000490062 CCL4L1Q8NHW4 92 aa17.19■□□□□ 0.34
ERCC3-207ENST00000490062 CALML6Q8TD86 181 aa17.19■□□□□ 0.34
ERCC3-207ENST00000490062 RHBDD1Q8TEB9 315 aa17.19■□□□□ 0.34
ERCC3-207ENST00000490062 TRIM56Q9BRZ2 755 aaKnown RBP17.19■□□□□ 0.34
ERCC3-207ENST00000490062 SLC32A1Q9H598 525 aa17.19■□□□□ 0.34
ERCC3-207ENST00000490062 EPB41L5Q9HCM4 733 aa17.19■□□□□ 0.34
ERCC3-207ENST00000490062 WASH6PQ9NQA3 447 aa17.19■□□□□ 0.34
ERCC3-207ENST00000490062 MARCH4Q9P2E8 410 aaPredicted RBP17.19■□□□□ 0.34
ERCC3-207ENST00000490062 ZNHIT2Q9UHR6 403 aa17.19■□□□□ 0.34
ERCC3-207ENST00000490062 GPSM3Q9Y4H4 160 aa17.19■□□□□ 0.34
ERCC3-207ENST00000490062 PIKFYVEQ9Y2I7 2098 aa17.19■□□□□ 0.34
ERCC3-207ENST00000490062 ESYT3A0FGR9 886 aa17.18■□□□□ 0.34
ERCC3-207ENST00000490062 A6NCN8 305 aa17.18■□□□□ 0.34
ERCC3-207ENST00000490062 BANF1O75531 89 aa17.18■□□□□ 0.34
ERCC3-207ENST00000490062 RPS3P23396 243 aaKnown RBP eCLIP17.18■□□□□ 0.34
ERCC3-207ENST00000490062 PDIA2Q13087 525 aaKnown RBP17.18■□□□□ 0.34
ERCC3-207ENST00000490062 ZNF658BQ4V348 819 aaPredicted RBP17.18■□□□□ 0.34
ERCC3-207ENST00000490062 DNTTIP2Q5QJE6 756 aaKnown RBP17.18■□□□□ 0.34
ERCC3-207ENST00000490062 RNF187Q5TA31 235 aaPredicted RBP17.18■□□□□ 0.34
ERCC3-207ENST00000490062 NEPROQ6NW34 567 aa17.18■□□□□ 0.34
ERCC3-207ENST00000490062 TMEM220Q6QAJ8 160 aa17.18■□□□□ 0.34
ERCC3-207ENST00000490062 UNC5AQ6ZN44 842 aa17.18■□□□□ 0.34
ERCC3-207ENST00000490062 MICALCLQ6ZW33 695 aa17.18■□□□□ 0.34
ERCC3-207ENST00000490062 TAF8Q7Z7C8 310 aa17.18■□□□□ 0.34
ERCC3-207ENST00000490062 GALNT7Q86SF2 657 aa17.18■□□□□ 0.34
ERCC3-207ENST00000490062 LRRC6Q86X45 466 aa17.18■□□□□ 0.34
ERCC3-207ENST00000490062 CILP2Q8IUL8 1156 aa17.18■□□□□ 0.34
ERCC3-207ENST00000490062 CNTN4Q8IWV2 1026 aa17.18■□□□□ 0.34
ERCC3-207ENST00000490062 EID2Q8N6I1 236 aa17.18■□□□□ 0.34
ERCC3-207ENST00000490062 EIF1ADQ8N9N8 165 aaKnown RBP17.18■□□□□ 0.34
ERCC3-207ENST00000490062 GPR156Q8NFN8 814 aa17.18■□□□□ 0.34
ERCC3-207ENST00000490062 CCDC97Q96F63 343 aaPredicted RBP17.18■□□□□ 0.34
ERCC3-207ENST00000490062 TSPYL1Q9H0U9 437 aa17.18■□□□□ 0.34
ERCC3-207ENST00000490062 TAAR2Q9P1P5 351 aa17.18■□□□□ 0.34
ERCC3-207ENST00000490062 GULP1Q9UBP9 304 aa17.18■□□□□ 0.34
ERCC3-207ENST00000490062 ZC3H7BQ9UGR2 993 aaKnown RBP17.18■□□□□ 0.34
ERCC3-207ENST00000490062 VPS9D1Q9Y2B5 631 aa17.18■□□□□ 0.34
ERCC3-207ENST00000490062 GOLGA4Q13439 2230 aaKnown RBP17.18■□□□□ 0.34
ERCC3-207ENST00000490062 CNOT1A5YKK6 2376 aaKnown RBP17.18■□□□□ 0.34
ERCC3-207ENST00000490062 LY6G6EA0A0G2JKS1 128 aa17.17■□□□□ 0.34
ERCC3-207ENST00000490062 MGAT4DA6NG13 374 aa17.17■□□□□ 0.34
ERCC3-207ENST00000490062 F8W8V4 182 aa17.17■□□□□ 0.34
ERCC3-207ENST00000490062 PFDN6O15212 129 aa17.17■□□□□ 0.34
ERCC3-207ENST00000490062 TNFSF14O43557 240 aa17.17■□□□□ 0.34
ERCC3-207ENST00000490062 SIGLEC6O43699 453 aa17.17■□□□□ 0.34
ERCC3-207ENST00000490062 DKK1O94907 266 aa17.17■□□□□ 0.34
ERCC3-207ENST00000490062 GSTA2P09210 222 aa17.17■□□□□ 0.34
ERCC3-207ENST00000490062 CKMT1AP12532 417 aa17.17■□□□□ 0.34
ERCC3-207ENST00000490062 VCLP18206 1134 aa17.17■□□□□ 0.34
ERCC3-207ENST00000490062 ECHS1P30084 290 aa17.17■□□□□ 0.34
ERCC3-207ENST00000490062 CUL1Q13616 776 aa17.17■□□□□ 0.34
ERCC3-207ENST00000490062 DEFB133Q30KQ1 61 aa17.17■□□□□ 0.34
ERCC3-207ENST00000490062 AGAP9Q5VTM2 703 aa17.17■□□□□ 0.34
ERCC3-207ENST00000490062 CEP128Q6ZU80 1094 aa17.17■□□□□ 0.34
ERCC3-207ENST00000490062 CHST15Q7LFX5 561 aaPredicted RBP17.17■□□□□ 0.34
ERCC3-207ENST00000490062 SDCCAG8Q86SQ7 713 aaPredicted RBP17.17■□□□□ 0.34
ERCC3-207ENST00000490062 TRAPPC5Q8IUR0 188 aa17.17■□□□□ 0.34
ERCC3-207ENST00000490062 ARL10Q8N8L6 244 aa17.17■□□□□ 0.34
ERCC3-207ENST00000490062 FBXO36Q8NEA4 188 aa17.17■□□□□ 0.34
ERCC3-207ENST00000490062 OR2L2Q8NH16 312 aa17.17■□□□□ 0.34
ERCC3-207ENST00000490062 GABPB2Q8TAK5 448 aaPredicted RBP17.17■□□□□ 0.34
ERCC3-207ENST00000490062 SETD7Q8WTS6 366 aaKnown RBP17.17■□□□□ 0.34
ERCC3-207ENST00000490062 SGF29Q96ES7 293 aa17.17■□□□□ 0.34
ERCC3-207ENST00000490062 FAM167BQ9BTA0 163 aa17.17■□□□□ 0.34
ERCC3-207ENST00000490062 P2RY12Q9H244 342 aa17.17■□□□□ 0.34
ERCC3-207ENST00000490062 INTS10Q9NVR2 710 aaKnown RBP17.17■□□□□ 0.34
ERCC3-207ENST00000490062 MOCS1Q9NZB8 636 aa17.17■□□□□ 0.34
ERCC3-207ENST00000490062 SLC23A2Q9UGH3 650 aa17.17■□□□□ 0.34
ERCC3-207ENST00000490062 CHMP2BQ9UQN3 213 aa17.17■□□□□ 0.34
ERCC3-207ENST00000490062 U3KQA8 63 aa17.17■□□□□ 0.34
ERCC3-207ENST00000490062 PRMT5O14744 637 aaPredicted RBP17.16■□□□□ 0.34
ERCC3-207ENST00000490062 NOBOXO60393 691 aa17.16■□□□□ 0.34
ERCC3-207ENST00000490062 POP7O75817 140 aaKnown RBP17.16■□□□□ 0.34
ERCC3-207ENST00000490062 LDOC1O95751 146 aaPredicted RBP17.16■□□□□ 0.34
ERCC3-207ENST00000490062 ACP5P13686 325 aa17.16■□□□□ 0.34
ERCC3-207ENST00000490062 ACP1P24666 158 aa17.16■□□□□ 0.34
ERCC3-207ENST00000490062 AK4P27144 223 aaPredicted RBP17.16■□□□□ 0.34
ERCC3-207ENST00000490062 ACTR1BP42025 376 aa17.16■□□□□ 0.34
ERCC3-207ENST00000490062 ACTR1AP61163 376 aa17.16■□□□□ 0.34
ERCC3-207ENST00000490062 FASTKD3Q14CZ7 662 aaKnown RBP17.16■□□□□ 0.34
ERCC3-207ENST00000490062 CRTC3Q6UUV7 619 aa17.16■□□□□ 0.34
ERCC3-207ENST00000490062 ABRAXAS1Q6UWZ7 409 aa17.16■□□□□ 0.34
ERCC3-207ENST00000490062 XKR5Q6UX68 686 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms