RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 HP1BP3Q5SSJ5 553 aaPredicted RBP10.45□□□□□ -0.74
SCAMP4-208ENST00000489554 STEAP4Q687X5 459 aa10.45□□□□□ -0.74
SCAMP4-208ENST00000489554 RFLNAQ6ZTI6 216 aa10.45□□□□□ -0.74
SCAMP4-208ENST00000489554 CROCCP2Q86T23 111 aa10.45□□□□□ -0.74
SCAMP4-208ENST00000489554 PDIK1LQ8N165 341 aa10.45□□□□□ -0.74
SCAMP4-208ENST00000489554 FGF11Q92914 225 aa10.45□□□□□ -0.74
SCAMP4-208ENST00000489554 SCAMP4Q969E2 229 aa10.45□□□□□ -0.74
SCAMP4-208ENST00000489554 SCARF2Q96GP6 870 aaPredicted RBP10.45□□□□□ -0.74
SCAMP4-208ENST00000489554 HIC2Q96JB3 615 aa10.45□□□□□ -0.74
SCAMP4-208ENST00000489554 ZNF578Q96N58 590 aaPredicted RBP10.45□□□□□ -0.74
SCAMP4-208ENST00000489554 RANBP9Q96S59 729 aa10.45□□□□□ -0.74
SCAMP4-208ENST00000489554 SRPK1Q96SB4 655 aaKnown RBP10.45□□□□□ -0.74
SCAMP4-208ENST00000489554 RIOK2Q9BVS4 552 aaKnown RBP10.45□□□□□ -0.74
SCAMP4-208ENST00000489554 KIFC1Q9BW19 673 aa10.45□□□□□ -0.74
SCAMP4-208ENST00000489554 CDH19Q9H159 772 aa10.45□□□□□ -0.74
SCAMP4-208ENST00000489554 CDC42EP4Q9H3Q1 356 aaKnown RBP10.45□□□□□ -0.74
SCAMP4-208ENST00000489554 SYNDIG1Q9H7V2 258 aa10.45□□□□□ -0.74
SCAMP4-208ENST00000489554 SAYSD1Q9NPB0 183 aa10.45□□□□□ -0.74
SCAMP4-208ENST00000489554 NINJ2Q9NZG7 142 aa10.45□□□□□ -0.74
SCAMP4-208ENST00000489554 APPL1Q9UKG1 709 aa10.45□□□□□ -0.74
SCAMP4-208ENST00000489554 SUFUQ9UMX1 484 aa10.45□□□□□ -0.74
SCAMP4-208ENST00000489554 SOX13Q9UN79 622 aa10.45□□□□□ -0.74
SCAMP4-208ENST00000489554 LHX6Q9UPM6 363 aa10.45□□□□□ -0.74
SCAMP4-208ENST00000489554 CHMP2BQ9UQN3 213 aa10.45□□□□□ -0.74
SCAMP4-208ENST00000489554 KCTD3Q9Y597 815 aa10.45□□□□□ -0.74
SCAMP4-208ENST00000489554 ANKRD11Q6UB99 2663 aaPredicted RBP10.45□□□□□ -0.74
SCAMP4-208ENST00000489554 LRP4O75096 1905 aa10.45□□□□□ -0.74
SCAMP4-208ENST00000489554 ZFHX4Q86UP3 3567 aa10.44□□□□□ -0.74
SCAMP4-208ENST00000489554 ZCWPW2A0A1B0GU75 182 aa10.44□□□□□ -0.74
SCAMP4-208ENST00000489554 SDR42E2A6NKP2 422 aa10.44□□□□□ -0.74
SCAMP4-208ENST00000489554 TMX2-CTNND1H3BSU7 103 aa10.44□□□□□ -0.74
SCAMP4-208ENST00000489554 TLX3O43711 291 aaPredicted RBP10.44□□□□□ -0.74
SCAMP4-208ENST00000489554 NUDT21O43809 227 aaKnown RBP10.44□□□□□ -0.74
SCAMP4-208ENST00000489554 FUCA1P04066 466 aa10.44□□□□□ -0.74
SCAMP4-208ENST00000489554 MPOP05164 745 aa10.44□□□□□ -0.74
SCAMP4-208ENST00000489554 ARNTP27540 789 aa10.44□□□□□ -0.74
SCAMP4-208ENST00000489554 EIF2S3P41091 472 aaKnown RBP10.44□□□□□ -0.74
SCAMP4-208ENST00000489554 MAGEA4P43358 317 aa10.44□□□□□ -0.74
SCAMP4-208ENST00000489554 ZNF140P52738 457 aaPredicted RBP10.44□□□□□ -0.74
SCAMP4-208ENST00000489554 ERVPABLB-1P60509 514 aa10.44□□□□□ -0.74
SCAMP4-208ENST00000489554 SARNPP82979 210 aaKnown RBP10.44□□□□□ -0.74
SCAMP4-208ENST00000489554 ACVR1Q04771 509 aa10.44□□□□□ -0.74
SCAMP4-208ENST00000489554 PTPRCAPQ14761 206 aa10.44□□□□□ -0.74
SCAMP4-208ENST00000489554 POU6F1Q14863 301 aa10.44□□□□□ -0.74
SCAMP4-208ENST00000489554 TUBB8Q3ZCM7 444 aa10.44□□□□□ -0.74
SCAMP4-208ENST00000489554 CCDC38Q502W7 563 aa10.44□□□□□ -0.74
SCAMP4-208ENST00000489554 HENMT1Q5T8I9 393 aaKnown RBP10.44□□□□□ -0.74
SCAMP4-208ENST00000489554 DOK6Q6PKX4 331 aa10.44□□□□□ -0.74
SCAMP4-208ENST00000489554 IGF2-ASQ6U949 168 aa10.44□□□□□ -0.74
SCAMP4-208ENST00000489554 LRRC69Q6ZNQ3 347 aa10.44□□□□□ -0.74
SCAMP4-208ENST00000489554 CENPUQ71F23 418 aa10.44□□□□□ -0.74
SCAMP4-208ENST00000489554 TMEM135Q86UB9 458 aa10.44□□□□□ -0.74
SCAMP4-208ENST00000489554 CCDC25Q86WR0 208 aa10.44□□□□□ -0.74
SCAMP4-208ENST00000489554 NRROSQ86YC3 692 aa10.44□□□□□ -0.74
SCAMP4-208ENST00000489554 CCNJLQ8IV13 435 aa10.44□□□□□ -0.74
SCAMP4-208ENST00000489554 ANKMY2Q8IV38 441 aa10.44□□□□□ -0.74
SCAMP4-208ENST00000489554 ZBED8Q8IZ13 594 aa10.44□□□□□ -0.74
SCAMP4-208ENST00000489554 MREGQ8N565 214 aa10.44□□□□□ -0.74
SCAMP4-208ENST00000489554 DNAAF3Q8N9W5 541 aa10.44□□□□□ -0.74
SCAMP4-208ENST00000489554 FBXO36Q8NEA4 188 aa10.44□□□□□ -0.74
SCAMP4-208ENST00000489554 CCL4L1Q8NHW4 92 aa10.44□□□□□ -0.74
SCAMP4-208ENST00000489554 LRRC39Q96DD0 335 aa10.44□□□□□ -0.74
SCAMP4-208ENST00000489554 COX14Q96I36 57 aa10.44□□□□□ -0.74
SCAMP4-208ENST00000489554 C9orf72Q96LT7 481 aa10.44□□□□□ -0.74
SCAMP4-208ENST00000489554 FCRL3Q96P31 734 aaPredicted RBP10.44□□□□□ -0.74
SCAMP4-208ENST00000489554 DCBLD2Q96PD2 775 aa10.44□□□□□ -0.74
SCAMP4-208ENST00000489554 OR2M4Q96R27 311 aa10.44□□□□□ -0.74
SCAMP4-208ENST00000489554 GFM1Q96RP9 751 aaKnown RBP10.44□□□□□ -0.74
SCAMP4-208ENST00000489554 EBNA1BP2Q99848 306 aaKnown RBP10.44□□□□□ -0.74
SCAMP4-208ENST00000489554 IL22Q9GZX6 179 aa10.44□□□□□ -0.74
SCAMP4-208ENST00000489554 FAM83DQ9H4H8 585 aa10.44□□□□□ -0.74
SCAMP4-208ENST00000489554 SUDS3Q9H7L9 328 aaPredicted RBP10.44□□□□□ -0.74
SCAMP4-208ENST00000489554 ZFYVE1Q9HBF4 777 aa10.44□□□□□ -0.74
SCAMP4-208ENST00000489554 MRM3Q9HC36 420 aaKnown RBP10.44□□□□□ -0.74
SCAMP4-208ENST00000489554 MAGEE1Q9HCI5 957 aa10.44□□□□□ -0.74
SCAMP4-208ENST00000489554 CHRAC1Q9NRG0 131 aa10.44□□□□□ -0.74
SCAMP4-208ENST00000489554 RAD18Q9NS91 495 aa10.44□□□□□ -0.74
SCAMP4-208ENST00000489554 TREX1Q9NSU2 369 aa10.44□□□□□ -0.74
SCAMP4-208ENST00000489554 TAAR2Q9P1P5 351 aa10.44□□□□□ -0.74
SCAMP4-208ENST00000489554 VPS18Q9P253 973 aa10.44□□□□□ -0.74
SCAMP4-208ENST00000489554 MTRF1LQ9UGC7 380 aaKnown RBP10.44□□□□□ -0.74
SCAMP4-208ENST00000489554 SLC2A6Q9UGQ3 507 aa10.44□□□□□ -0.74
SCAMP4-208ENST00000489554 ZNF711Q9Y462 761 aa10.44□□□□□ -0.74
SCAMP4-208ENST00000489554 TCAF1Q9Y4C2 921 aa10.44□□□□□ -0.74
SCAMP4-208ENST00000489554 ENTPD2Q9Y5L3 495 aa10.44□□□□□ -0.74
SCAMP4-208ENST00000489554 ARL5AQ9Y689 179 aa10.44□□□□□ -0.74
SCAMP4-208ENST00000489554 FAM237BA0A1B0GVD1 139 aa10.43□□□□□ -0.74
SCAMP4-208ENST00000489554 D6RAR5 112 aa10.43□□□□□ -0.74
SCAMP4-208ENST00000489554 AP3B1O00203 1094 aa10.43□□□□□ -0.74
SCAMP4-208ENST00000489554 ZW10O43264 779 aa10.43□□□□□ -0.74
SCAMP4-208ENST00000489554 ASMTLO95671 621 aa10.43□□□□□ -0.74
SCAMP4-208ENST00000489554 RPLP0P05388 317 aaKnown RBP10.43□□□□□ -0.74
SCAMP4-208ENST00000489554 ADRA1DP25100 572 aa10.43□□□□□ -0.74
SCAMP4-208ENST00000489554 NMBRP28336 390 aa10.43□□□□□ -0.74
SCAMP4-208ENST00000489554 MLLT3P42568 568 aaPredicted RBP10.43□□□□□ -0.74
SCAMP4-208ENST00000489554 ABCG1P45844 678 aa10.43□□□□□ -0.74
SCAMP4-208ENST00000489554 POLD2P49005 469 aa10.43□□□□□ -0.74
SCAMP4-208ENST00000489554 ARSDP51689 593 aa10.43□□□□□ -0.74
SCAMP4-208ENST00000489554 DCDC1P59894 354 aa10.43□□□□□ -0.74
SCAMP4-208ENST00000489554 CCL7P80098 99 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms