RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 ATP1B2P14415 290 aaPredicted RBP17.06■□□□□ 0.32
MDC1-206ENST00000489540 ACRV1P26436 265 aa17.06■□□□□ 0.32
MDC1-206ENST00000489540 PAFAH1B1P43034 410 aa17.06■□□□□ 0.32
MDC1-206ENST00000489540 ARSDP51689 593 aa17.06■□□□□ 0.32
MDC1-206ENST00000489540 ACVR1Q04771 509 aa17.06■□□□□ 0.32
MDC1-206ENST00000489540 DMPKQ09013 629 aa17.06■□□□□ 0.32
MDC1-206ENST00000489540 KCNJ11Q14654 390 aa17.06■□□□□ 0.32
MDC1-206ENST00000489540 RTP5Q14D33 572 aa17.06■□□□□ 0.32
MDC1-206ENST00000489540 BCL7AQ4VC05 210 aa17.06■□□□□ 0.32
MDC1-206ENST00000489540 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.06■□□□□ 0.32
MDC1-206ENST00000489540 AGAP9Q5VTM2 703 aa17.06■□□□□ 0.32
MDC1-206ENST00000489540 ARMC3Q5W041 872 aa17.06■□□□□ 0.32
MDC1-206ENST00000489540 DET1Q7L5Y6 550 aa17.06■□□□□ 0.32
MDC1-206ENST00000489540 SERPINA9Q86WD7 417 aa17.06■□□□□ 0.32
MDC1-206ENST00000489540 OR13J1Q8NGT2 312 aa17.06■□□□□ 0.32
MDC1-206ENST00000489540 HDAC10Q969S8 669 aa17.06■□□□□ 0.32
MDC1-206ENST00000489540 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.06■□□□□ 0.32
MDC1-206ENST00000489540 SGSM3Q96HU1 749 aa17.06■□□□□ 0.32
MDC1-206ENST00000489540 LINC00615Q96LM1 132 aaPredicted RBP17.06■□□□□ 0.32
MDC1-206ENST00000489540 TTC1Q99614 292 aa17.06■□□□□ 0.32
MDC1-206ENST00000489540 SLC38A3Q99624 504 aa17.06■□□□□ 0.32
MDC1-206ENST00000489540 CCDC86Q9H6F5 360 aaKnown RBP17.06■□□□□ 0.32
MDC1-206ENST00000489540 IGLV3-16A0A075B6K0 115 aa17.05■□□□□ 0.32
MDC1-206ENST00000489540 CCDC162PA2VCL2 907 aa17.05■□□□□ 0.32
MDC1-206ENST00000489540 MGAT4DA6NG13 374 aa17.05■□□□□ 0.32
MDC1-206ENST00000489540 PDZK1P1A8MUH7 402 aa17.05■□□□□ 0.32
MDC1-206ENST00000489540 XRCC1P18887 633 aaPredicted RBP17.05■□□□□ 0.32
MDC1-206ENST00000489540 CDKN1CP49918 316 aaPredicted RBP17.05■□□□□ 0.32
MDC1-206ENST00000489540 OR1D5P58170 312 aa17.05■□□□□ 0.32
MDC1-206ENST00000489540 HHEXQ03014 270 aa17.05■□□□□ 0.32
MDC1-206ENST00000489540 SQSTM1Q13501 440 aa17.05■□□□□ 0.32
MDC1-206ENST00000489540 LYPLAL1Q5VWZ2 237 aa17.05■□□□□ 0.32
MDC1-206ENST00000489540 AFTPHQ6ULP2 937 aa17.05■□□□□ 0.32
MDC1-206ENST00000489540 NXPE2Q96DL1 559 aa17.05■□□□□ 0.32
MDC1-206ENST00000489540 CAPZA3Q96KX2 299 aa17.05■□□□□ 0.32
MDC1-206ENST00000489540 RUNDC3BQ96NL0 473 aa17.05■□□□□ 0.32
MDC1-206ENST00000489540 TMEM74Q96NL1 305 aa17.05■□□□□ 0.32
MDC1-206ENST00000489540 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.05■□□□□ 0.32
MDC1-206ENST00000489540 CHRAC1Q9NRG0 131 aa17.05■□□□□ 0.32
MDC1-206ENST00000489540 CPNE7Q9UBL6 633 aa17.05■□□□□ 0.32
MDC1-206ENST00000489540 DKK4Q9UBT3 224 aa17.05■□□□□ 0.32
MDC1-206ENST00000489540 SLC2A6Q9UGQ3 507 aa17.05■□□□□ 0.32
MDC1-206ENST00000489540 ASXL3Q9C0F0 2248 aa17.05■□□□□ 0.32
MDC1-206ENST00000489540 ACACBO00763 2458 aa17.05■□□□□ 0.32
MDC1-206ENST00000489540 CEP295Q9C0D2 2601 aa17.05■□□□□ 0.32
MDC1-206ENST00000489540 TCRBV7S3A2A0A539 114 aa17.04■□□□□ 0.32
MDC1-206ENST00000489540 D6RAR5 112 aa17.04■□□□□ 0.32
MDC1-206ENST00000489540 PRAMEP78395 509 aa17.04■□□□□ 0.32
MDC1-206ENST00000489540 GPLD1P80108 840 aa17.04■□□□□ 0.32
MDC1-206ENST00000489540 PPP1R7Q15435 360 aa17.04■□□□□ 0.32
MDC1-206ENST00000489540 AMZ1Q400G9 498 aa17.04■□□□□ 0.32
MDC1-206ENST00000489540 CERS6Q6ZMG9 384 aa17.04■□□□□ 0.32
MDC1-206ENST00000489540 PIM3Q86V86 326 aa17.04■□□□□ 0.32
MDC1-206ENST00000489540 PIANPQ8IYJ0 282 aa17.04■□□□□ 0.32
MDC1-206ENST00000489540 MCUQ8NE86 351 aa17.04■□□□□ 0.32
MDC1-206ENST00000489540 OR6P1Q8NGX9 317 aa17.04■□□□□ 0.32
MDC1-206ENST00000489540 OR2L2Q8NH16 312 aa17.04■□□□□ 0.32
MDC1-206ENST00000489540 OR4L1Q8NH43 312 aa17.04■□□□□ 0.32
MDC1-206ENST00000489540 CPT1BQ92523 772 aa17.04■□□□□ 0.32
MDC1-206ENST00000489540 SLCO2A1Q92959 643 aa17.04■□□□□ 0.32
MDC1-206ENST00000489540 ZNF778Q96MU6 729 aa17.04■□□□□ 0.32
MDC1-206ENST00000489540 DPYSL5Q9BPU6 564 aa17.04■□□□□ 0.32
MDC1-206ENST00000489540 KCNK4Q9NYG8 393 aa17.04■□□□□ 0.32
MDC1-206ENST00000489540 PCYOX1Q9UHG3 505 aa17.04■□□□□ 0.32
MDC1-206ENST00000489540 ACSL5Q9ULC5 683 aa17.04■□□□□ 0.32
MDC1-206ENST00000489540 PCDHB1Q9Y5F3 818 aa17.04■□□□□ 0.32
MDC1-206ENST00000489540 ENTPD2Q9Y5L3 495 aa17.04■□□□□ 0.32
MDC1-206ENST00000489540 AK5Q9Y6K8 562 aa17.04■□□□□ 0.32
MDC1-206ENST00000489540 C17orf113A0A1B0GUU1 675 aa17.04■□□□□ 0.32
MDC1-206ENST00000489540 CASC3O15234 703 aaKnown RBP17.04■□□□□ 0.32
MDC1-206ENST00000489540 SGTAO43765 313 aa17.04■□□□□ 0.32
MDC1-206ENST00000489540 AP2A2O94973 939 aa17.04■□□□□ 0.32
MDC1-206ENST00000489540 CPNE6O95741 557 aa17.04■□□□□ 0.32
MDC1-206ENST00000489540 GOT2P00505 430 aaKnown RBP17.04■□□□□ 0.32
MDC1-206ENST00000489540 VIPP01282 170 aa17.04■□□□□ 0.32
MDC1-206ENST00000489540 CAPNS1P04632 268 aa17.04■□□□□ 0.32
MDC1-206ENST00000489540 MLNP12872 115 aa17.04■□□□□ 0.32
MDC1-206ENST00000489540 RPL10P27635 214 aaKnown RBP17.04■□□□□ 0.32
MDC1-206ENST00000489540 CD1CP29017 333 aa17.04■□□□□ 0.32
MDC1-206ENST00000489540 FOXN2P32314 431 aa17.04■□□□□ 0.32
MDC1-206ENST00000489540 PPARGP37231 505 aaPredicted RBP17.04■□□□□ 0.32
MDC1-206ENST00000489540 HALP42357 657 aa17.04■□□□□ 0.32
MDC1-206ENST00000489540 PRLHRP49683 370 aa17.04■□□□□ 0.32
MDC1-206ENST00000489540 TERF1P54274 439 aa17.04■□□□□ 0.32
MDC1-206ENST00000489540 INHBCP55103 352 aa17.04■□□□□ 0.32
MDC1-206ENST00000489540 UBE2IP63279 158 aaKnown RBP17.04■□□□□ 0.32
MDC1-206ENST00000489540 CYP4F3Q08477 520 aa17.04■□□□□ 0.32
MDC1-206ENST00000489540 ITIH4Q14624 930 aa17.04■□□□□ 0.32
MDC1-206ENST00000489540 SEPT7Q16181 437 aaKnown RBP17.04■□□□□ 0.32
MDC1-206ENST00000489540 DBN1Q16643 649 aa17.04■□□□□ 0.32
MDC1-206ENST00000489540 KCTD19Q17RG1 926 aaPredicted RBP17.04■□□□□ 0.32
MDC1-206ENST00000489540 METRNLQ641Q3 311 aa17.04■□□□□ 0.32
MDC1-206ENST00000489540 ZNF534Q76KX8 674 aa17.04■□□□□ 0.32
MDC1-206ENST00000489540 TRIM48Q8IWZ4 208 aa17.04■□□□□ 0.32
MDC1-206ENST00000489540 BEND7Q8N7W2 519 aaPredicted RBP17.04■□□□□ 0.32
MDC1-206ENST00000489540 KIFC1Q9BW19 673 aa17.04■□□□□ 0.32
MDC1-206ENST00000489540 STRADBQ9C0K7 418 aa17.04■□□□□ 0.32
MDC1-206ENST00000489540 DDX47Q9H0S4 455 aaKnown RBP17.04■□□□□ 0.32
MDC1-206ENST00000489540 VPS37BQ9H9H4 285 aa17.04■□□□□ 0.32
MDC1-206ENST00000489540 UCK1Q9HA47 277 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms