RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 ANKRD20A3Q5VUR7 823 aa22.64■■□□□ 1.21
COL9A3-213ENST00000489045 DARS2Q6PI48 645 aaKnown RBP22.64■■□□□ 1.21
COL9A3-213ENST00000489045 ARHGAP22Q7Z5H3 698 aa22.64■■□□□ 1.21
COL9A3-213ENST00000489045 TRIM48Q8IWZ4 208 aa22.64■■□□□ 1.21
COL9A3-213ENST00000489045 BRSK1Q8TDC3 778 aa22.64■■□□□ 1.21
COL9A3-213ENST00000489045 TTC25Q96NG3 672 aa22.64■■□□□ 1.21
COL9A3-213ENST00000489045 DDA1Q9BW61 102 aa22.64■■□□□ 1.21
COL9A3-213ENST00000489045 EPB41L1Q9H4G0 881 aa22.64■■□□□ 1.21
COL9A3-213ENST00000489045 UGT1A7Q9HAW7 530 aa22.64■■□□□ 1.21
COL9A3-213ENST00000489045 UGT1A10Q9HAW8 530 aa22.64■■□□□ 1.21
COL9A3-213ENST00000489045 UGT1A8Q9HAW9 530 aa22.64■■□□□ 1.21
COL9A3-213ENST00000489045 ZNF624Q9P2J8 865 aaPredicted RBP22.64■■□□□ 1.21
COL9A3-213ENST00000489045 B3GALT1Q9Y5Z6 326 aa22.64■■□□□ 1.21
COL9A3-213ENST00000489045 B4E171 279 aa22.63■■□□□ 1.21
COL9A3-213ENST00000489045 PPFIA2O75334 1257 aa22.63■■□□□ 1.21
COL9A3-213ENST00000489045 TJP3O95049 919 aa22.63■■□□□ 1.21
COL9A3-213ENST00000489045 VIPP01282 170 aa22.63■■□□□ 1.21
COL9A3-213ENST00000489045 BRAFP15056 766 aa22.63■■□□□ 1.21
COL9A3-213ENST00000489045 RPL10P27635 214 aaKnown RBP22.63■■□□□ 1.21
COL9A3-213ENST00000489045 CA5AP35218 305 aa22.63■■□□□ 1.21
COL9A3-213ENST00000489045 SLC19A1P41440 591 aa22.63■■□□□ 1.21
COL9A3-213ENST00000489045 TSPAN7P41732 249 aa22.63■■□□□ 1.21
COL9A3-213ENST00000489045 DRG2P55039 364 aaKnown RBP22.63■■□□□ 1.21
COL9A3-213ENST00000489045 OLIG2Q13516 323 aa22.63■■□□□ 1.21
COL9A3-213ENST00000489045 PTPRCAPQ14761 206 aa22.63■■□□□ 1.21
COL9A3-213ENST00000489045 TMEM139Q8IV31 216 aa22.63■■□□□ 1.21
COL9A3-213ENST00000489045 BMPERQ8N8U9 685 aa22.63■■□□□ 1.21
COL9A3-213ENST00000489045 JPH3Q8WXH2 748 aaPredicted RBP22.63■■□□□ 1.21
COL9A3-213ENST00000489045 APOL2Q9BQE5 337 aa22.63■■□□□ 1.21
COL9A3-213ENST00000489045 UCK1Q9HA47 277 aa22.63■■□□□ 1.21
COL9A3-213ENST00000489045 KLHL3Q9UH77 587 aa22.63■■□□□ 1.21
COL9A3-213ENST00000489045 ARL5AQ9Y689 179 aa22.63■■□□□ 1.21
COL9A3-213ENST00000489045 STX7O15400 261 aaKnown RBP22.62■■□□□ 1.21
COL9A3-213ENST00000489045 STK10O94804 968 aaKnown RBP22.62■■□□□ 1.21
COL9A3-213ENST00000489045 VCLP18206 1134 aa22.62■■□□□ 1.21
COL9A3-213ENST00000489045 IDSP22304 550 aa22.62■■□□□ 1.21
COL9A3-213ENST00000489045 ADRA1AP35348 466 aa22.62■■□□□ 1.21
COL9A3-213ENST00000489045 ITGA9Q13797 1035 aa22.62■■□□□ 1.21
COL9A3-213ENST00000489045 LY6DQ14210 128 aa22.62■■□□□ 1.21
COL9A3-213ENST00000489045 PRPSAP1Q14558 356 aa22.62■■□□□ 1.21
COL9A3-213ENST00000489045 LDLRAP1Q5SW96 308 aa22.62■■□□□ 1.21
COL9A3-213ENST00000489045 ABRAXAS1Q6UWZ7 409 aa22.62■■□□□ 1.21
COL9A3-213ENST00000489045 TMEM26Q6ZUK4 368 aa22.62■■□□□ 1.21
COL9A3-213ENST00000489045 DDHD1Q8NEL9 900 aa22.62■■□□□ 1.21
COL9A3-213ENST00000489045 CCDC110Q8TBZ0 833 aa22.62■■□□□ 1.21
COL9A3-213ENST00000489045 SGF29Q96ES7 293 aa22.62■■□□□ 1.21
COL9A3-213ENST00000489045 SPATA13Q96N96 652 aa22.62■■□□□ 1.21
COL9A3-213ENST00000489045 ZCCHC2Q9C0B9 1178 aaKnown RBP22.62■■□□□ 1.21
COL9A3-213ENST00000489045 OGFRQ9NZT2 677 aa22.62■■□□□ 1.21
COL9A3-213ENST00000489045 TRIM10Q9UDY6 481 aa22.62■■□□□ 1.21
COL9A3-213ENST00000489045 AMFRQ9UKV5 643 aa22.62■■□□□ 1.21
COL9A3-213ENST00000489045 MN1Q10571 1320 aaPredicted RBP22.61■■□□□ 1.21
COL9A3-213ENST00000489045 OR52A4PA6NMU1 304 aa22.61■■□□□ 1.21
COL9A3-213ENST00000489045 CTSCP53634 463 aa22.61■■□□□ 1.21
COL9A3-213ENST00000489045 RAB15P59190 212 aa22.61■■□□□ 1.21
COL9A3-213ENST00000489045 DCAF12Q5T6F0 453 aa22.61■■□□□ 1.21
COL9A3-213ENST00000489045 GPRC6AQ5T6X5 926 aa22.61■■□□□ 1.21
COL9A3-213ENST00000489045 AGAP9Q5VTM2 703 aa22.61■■□□□ 1.21
COL9A3-213ENST00000489045 ANKS6Q68DC2 871 aa22.61■■□□□ 1.21
COL9A3-213ENST00000489045 WASH2PQ6VEQ5 465 aa22.61■■□□□ 1.21
COL9A3-213ENST00000489045 RANBP10Q6VN20 620 aa22.61■■□□□ 1.21
COL9A3-213ENST00000489045 PEX26Q7Z412 305 aa22.61■■□□□ 1.21
COL9A3-213ENST00000489045 ZNF843Q8N446 348 aa22.61■■□□□ 1.21
COL9A3-213ENST00000489045 RASGEF1AQ8N9B8 481 aa22.61■■□□□ 1.21
COL9A3-213ENST00000489045 DESI2Q9BSY9 194 aa22.61■■□□□ 1.21
COL9A3-213ENST00000489045 ASPSCR1Q9BZE9 553 aa22.61■■□□□ 1.21
COL9A3-213ENST00000489045 WASH6PQ9NQA3 447 aa22.61■■□□□ 1.21
COL9A3-213ENST00000489045 POT1Q9NUX5 634 aa22.61■■□□□ 1.21
COL9A3-213ENST00000489045 PACSIN2Q9UNF0 486 aaPredicted RBP22.61■■□□□ 1.21
COL9A3-213ENST00000489045 AAR2Q9Y312 384 aaKnown RBP22.61■■□□□ 1.21
COL9A3-213ENST00000489045 SLC30A1Q9Y6M5 507 aa22.61■■□□□ 1.21
COL9A3-213ENST00000489045 COL6A6A6NMZ7 2263 aa22.61■■□□□ 1.21
COL9A3-213ENST00000489045 HELZ2Q9BYK8 2649 aaKnown RBP22.6■■□□□ 1.21
COL9A3-213ENST00000489045 A0A0U1RQJ8 604 aa22.6■■□□□ 1.21
COL9A3-213ENST00000489045 PRAMEF1O95521 474 aa22.6■■□□□ 1.21
COL9A3-213ENST00000489045 TYRP1P17643 537 aa22.6■■□□□ 1.21
COL9A3-213ENST00000489045 WT1P19544 449 aaPredicted RBP22.6■■□□□ 1.21
COL9A3-213ENST00000489045 LPOP22079 712 aaPredicted RBP22.6■■□□□ 1.21
COL9A3-213ENST00000489045 ATP1A2P50993 1020 aa22.6■■□□□ 1.21
COL9A3-213ENST00000489045 GFERP55789 205 aa22.6■■□□□ 1.21
COL9A3-213ENST00000489045 TAF1AQ15573 450 aaPredicted RBP22.6■■□□□ 1.21
COL9A3-213ENST00000489045 PLXDC1Q8IUK5 500 aa22.6■■□□□ 1.21
COL9A3-213ENST00000489045 CXorf40BQ96DE9 158 aa22.6■■□□□ 1.21
COL9A3-213ENST00000489045 SEMA4CQ9C0C4 833 aa22.6■■□□□ 1.21
COL9A3-213ENST00000489045 SMOXQ9NWM0 555 aa22.6■■□□□ 1.21
COL9A3-213ENST00000489045 WDR37Q9Y2I8 494 aa22.6■■□□□ 1.21
COL9A3-213ENST00000489045 PCDHGA4Q9Y5G9 962 aa22.6■■□□□ 1.21
COL9A3-213ENST00000489045 ZNF462Q96JM2 2506 aa22.6■■□□□ 1.21
COL9A3-213ENST00000489045 OR2AG2A6NM03 316 aa22.59■■□□□ 1.21
COL9A3-213ENST00000489045 C2orf81A6NN90 581 aa22.59■■□□□ 1.21
COL9A3-213ENST00000489045 UBXN7O94888 489 aa22.59■■□□□ 1.21
COL9A3-213ENST00000489045 MC2RQ01718 297 aa22.59■■□□□ 1.21
COL9A3-213ENST00000489045 KIF5AQ12840 1032 aa22.59■■□□□ 1.21
COL9A3-213ENST00000489045 TMEM220Q6QAJ8 160 aa22.59■■□□□ 1.21
COL9A3-213ENST00000489045 AMZ2Q86W34 360 aa22.59■■□□□ 1.21
COL9A3-213ENST00000489045 UBL4BQ8N7F7 174 aa22.59■■□□□ 1.21
COL9A3-213ENST00000489045 OR4K2Q8NGD2 314 aa22.59■■□□□ 1.21
COL9A3-213ENST00000489045 ZNF398Q8TD17 642 aa22.59■■□□□ 1.21
COL9A3-213ENST00000489045 NKD1Q969G9 470 aa22.59■■□□□ 1.21
COL9A3-213ENST00000489045 TEFMQ96QE5 360 aaKnown RBP22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms