RNA–Protein interactions for RNA: ENST00000488994.5

PNCK-231, Transcript of pregnancy up-regulated nonubiquitous CaM kinase, human

TSL 2

Gene PNCK, Length 1,437 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PNCK-231	ENST00000488994	TBC1D3C	Q6IPX1	549 aa		18.25	■□□□□ 0.51
PNCK-231	ENST00000488994	ADAMTSL4	Q6UY14	1074 aa		18.25	■□□□□ 0.51
PNCK-231	ENST00000488994	CDHR3	Q6ZTQ4	885 aa		18.25	■□□□□ 0.51
PNCK-231	ENST00000488994	TAX1BP1	Q86VP1	789 aa		18.25	■□□□□ 0.51
PNCK-231	ENST00000488994	TBC1D3	Q8IZP1	549 aa	Predicted RBP	18.25	■□□□□ 0.51
PNCK-231	ENST00000488994	PGBD3	Q8N328	593 aa		18.25	■□□□□ 0.51
PNCK-231	ENST00000488994	TSTD1	Q8NFU3	115 aa		18.25	■□□□□ 0.51
PNCK-231	ENST00000488994	RDH11	Q8TC12	318 aa		18.25	■□□□□ 0.51
PNCK-231	ENST00000488994	HMGB4	Q8WW32	186 aa		18.25	■□□□□ 0.51
PNCK-231	ENST00000488994	FAM111A	Q96PZ2	611 aa		18.25	■□□□□ 0.51
PNCK-231	ENST00000488994	PAIP2	Q9BPZ3	127 aa	Known RBP	18.25	■□□□□ 0.51
PNCK-231	ENST00000488994	BTBD1	Q9H0C5	482 aa		18.25	■□□□□ 0.51
PNCK-231	ENST00000488994	SLC6A17	Q9H1V8	727 aa		18.25	■□□□□ 0.51
PNCK-231	ENST00000488994	CCDC134	Q9H6E4	229 aa		18.25	■□□□□ 0.51
PNCK-231	ENST00000488994	NMRAL1	Q9HBL8	299 aa		18.25	■□□□□ 0.51
PNCK-231	ENST00000488994	RUVBL2	Q9Y230	463 aa	Known RBP	18.25	■□□□□ 0.51
PNCK-231	ENST00000488994	COQ6	Q9Y2Z9	468 aa		18.25	■□□□□ 0.51
PNCK-231	ENST00000488994	SRRM3	A6NNA2	597 aa	Predicted RBP	18.24	■□□□□ 0.51
PNCK-231	ENST00000488994	FADS2P1	A8MWK0	482 aa		18.24	■□□□□ 0.51
PNCK-231	ENST00000488994	BIRC5	O15392	142 aa		18.24	■□□□□ 0.51
PNCK-231	ENST00000488994	RNGTT	O60942	597 aa	Known RBP	18.24	■□□□□ 0.51
PNCK-231	ENST00000488994	WISP3	O95389	354 aa	Predicted RBP	18.24	■□□□□ 0.51
PNCK-231	ENST00000488994	RBP1	P09455	135 aa		18.24	■□□□□ 0.51
PNCK-231	ENST00000488994	DHRS4L1	P0CG22	281 aa		18.24	■□□□□ 0.51
PNCK-231	ENST00000488994	CCDC166	P0CW27	439 aa		18.24	■□□□□ 0.51
PNCK-231	ENST00000488994	ETV4	P43268	484 aa		18.24	■□□□□ 0.51
PNCK-231	ENST00000488994	WDR4	P57081	412 aa	Known RBP	18.24	■□□□□ 0.51
PNCK-231	ENST00000488994	ACAP2	Q15057	778 aa		18.24	■□□□□ 0.51
PNCK-231	ENST00000488994	TTLL9	Q3SXZ7	439 aa		18.24	■□□□□ 0.51
PNCK-231	ENST00000488994	TMEM259	Q4ZIN3	620 aa		18.24	■□□□□ 0.51
PNCK-231	ENST00000488994	TRIM42	Q8IWZ5	723 aa		18.24	■□□□□ 0.51
PNCK-231	ENST00000488994	OR2T34	Q8NGX1	318 aa		18.24	■□□□□ 0.51
PNCK-231	ENST00000488994	INPP5D	Q92835	1189 aa		18.24	■□□□□ 0.51
PNCK-231	ENST00000488994	BOC	Q9BWV1	1114 aa		18.24	■□□□□ 0.51
PNCK-231	ENST00000488994	SLC17A9	Q9BYT1	436 aa		18.24	■□□□□ 0.51
PNCK-231	ENST00000488994	LATS2	Q9NRM7	1088 aa		18.24	■□□□□ 0.51
PNCK-231	ENST00000488994	SPATS2L	Q9NUQ6	558 aa	Known RBP	18.24	■□□□□ 0.51
PNCK-231	ENST00000488994	PSD3	Q9NYI0	1048 aa		18.24	■□□□□ 0.51
PNCK-231	ENST00000488994	USP36	Q9P275	1121 aa	Known RBP	18.24	■□□□□ 0.51
PNCK-231	ENST00000488994	SLC17A7	Q9P2U7	560 aa		18.24	■□□□□ 0.51
PNCK-231	ENST00000488994	TMPRSS11E	Q9UL52	423 aa		18.24	■□□□□ 0.51
PNCK-231	ENST00000488994	DHRS7	Q9Y394	339 aa		18.24	■□□□□ 0.51
PNCK-231	ENST00000488994		A0A1W2PQU0	124 aa		18.23	■□□□□ 0.51
PNCK-231	ENST00000488994		K7ESF4	209 aa		18.23	■□□□□ 0.51
PNCK-231	ENST00000488994	PLIN3	O60664	434 aa		18.23	■□□□□ 0.51
PNCK-231	ENST00000488994	ZNF217	O75362	1048 aa		18.23	■□□□□ 0.51
PNCK-231	ENST00000488994	ZNF37A	P17032	561 aa	Predicted RBP	18.23	■□□□□ 0.51
PNCK-231	ENST00000488994	IL2	P60568	153 aa		18.23	■□□□□ 0.51
PNCK-231	ENST00000488994	ATP6V0D1	P61421	351 aa		18.23	■□□□□ 0.51
PNCK-231	ENST00000488994	GNGT1	P63211	74 aa		18.23	■□□□□ 0.51
PNCK-231	ENST00000488994	PNCK	Q6P2M8	343 aa		18.23	■□□□□ 0.51
PNCK-231	ENST00000488994	TSSK4	Q6SA08	328 aa		18.23	■□□□□ 0.51
PNCK-231	ENST00000488994	TRIM69	Q86WT6	500 aa		18.23	■□□□□ 0.51
PNCK-231	ENST00000488994	CENPL	Q8N0S6	344 aa	Predicted RBP	18.23	■□□□□ 0.51
PNCK-231	ENST00000488994	CCDC63	Q8NA47	563 aa		18.23	■□□□□ 0.51
PNCK-231	ENST00000488994	CKAP2	Q8WWK9	683 aa		18.23	■□□□□ 0.51
PNCK-231	ENST00000488994	SREK1	Q8WXA9	508 aa	Known RBP	18.23	■□□□□ 0.51
PNCK-231	ENST00000488994	ZNF514	Q96K75	400 aa	Predicted RBP	18.23	■□□□□ 0.51
PNCK-231	ENST00000488994	MAGEB18	Q96M61	343 aa		18.23	■□□□□ 0.51
PNCK-231	ENST00000488994	GPR21	Q99679	349 aa		18.23	■□□□□ 0.51
PNCK-231	ENST00000488994	TRIM39	Q9HCM9	518 aa		18.23	■□□□□ 0.51
PNCK-231	ENST00000488994	TMEM216	Q9P0N5	145 aa		18.23	■□□□□ 0.51
PNCK-231	ENST00000488994	MED16	Q9Y2X0	877 aa		18.23	■□□□□ 0.51
PNCK-231	ENST00000488994	EIF3F	O00303	357 aa	Predicted RBP	18.23	■□□□□ 0.51
PNCK-231	ENST00000488994	VEGFD	O43915	354 aa		18.23	■□□□□ 0.51
PNCK-231	ENST00000488994	SHOX2	O60902	331 aa	Predicted RBP	18.23	■□□□□ 0.51
PNCK-231	ENST00000488994	NIPSNAP2	O75323	286 aa		18.23	■□□□□ 0.51
PNCK-231	ENST00000488994	FTH1	P02794	183 aa		18.23	■□□□□ 0.51
PNCK-231	ENST00000488994	GSTM1	P09488	218 aa		18.23	■□□□□ 0.51
PNCK-231	ENST00000488994	CA5A	P35218	305 aa		18.23	■□□□□ 0.51
PNCK-231	ENST00000488994	SERPINB4	P48594	390 aa		18.23	■□□□□ 0.51
PNCK-231	ENST00000488994	RGS4	P49798	205 aa		18.23	■□□□□ 0.51
PNCK-231	ENST00000488994	CLCN7	P51798	805 aa		18.23	■□□□□ 0.51
PNCK-231	ENST00000488994	IRF9	Q00978	393 aa		18.23	■□□□□ 0.51
PNCK-231	ENST00000488994	TIAL1	Q01085	375 aa	Known RBP eCLIP	18.23	■□□□□ 0.51
PNCK-231	ENST00000488994	GSTM4	Q03013	218 aa		18.23	■□□□□ 0.51
PNCK-231	ENST00000488994	TMEM115	Q12893	351 aa	Predicted RBP	18.23	■□□□□ 0.51
PNCK-231	ENST00000488994	ZNF460	Q14592	562 aa		18.23	■□□□□ 0.51
PNCK-231	ENST00000488994	SEL1L3	Q68CR1	1132 aa		18.23	■□□□□ 0.51
PNCK-231	ENST00000488994	LRRC8E	Q6NSJ5	796 aa		18.23	■□□□□ 0.51
PNCK-231	ENST00000488994	PLD6	Q8N2A8	252 aa	Known RBP	18.23	■□□□□ 0.51
PNCK-231	ENST00000488994	CAMKK1	Q8N5S9	505 aa		18.23	■□□□□ 0.51
PNCK-231	ENST00000488994	CLDN19	Q8N6F1	224 aa		18.23	■□□□□ 0.51
PNCK-231	ENST00000488994	ARMC2	Q8NEN0	867 aa		18.23	■□□□□ 0.51
PNCK-231	ENST00000488994	KCTD4	Q8WVF5	259 aa		18.23	■□□□□ 0.51
PNCK-231	ENST00000488994	PDLIM5	Q96HC4	596 aa	Known RBP	18.23	■□□□□ 0.51
PNCK-231	ENST00000488994	HIC2	Q96JB3	615 aa		18.23	■□□□□ 0.51
PNCK-231	ENST00000488994	LENG8	Q96PV6	779 aa	Predicted RBP	18.23	■□□□□ 0.51
PNCK-231	ENST00000488994	MRPL57	Q9BQC6	102 aa	Known RBP	18.23	■□□□□ 0.51
PNCK-231	ENST00000488994	ZFR2	Q9UPR6	939 aa	Known RBP	18.23	■□□□□ 0.51
PNCK-231	ENST00000488994	DMXL1	Q9Y485	3027 aa		18.22	■□□□□ 0.51
PNCK-231	ENST00000488994	RRP9	O43818	475 aa	Known RBP	18.22	■□□□□ 0.51
PNCK-231	ENST00000488994	APBB3	O95704	486 aa		18.22	■□□□□ 0.51
PNCK-231	ENST00000488994	SOD1	P00441	154 aa		18.22	■□□□□ 0.51
PNCK-231	ENST00000488994	PROC	P04070	461 aa		18.22	■□□□□ 0.51
PNCK-231	ENST00000488994	CBSL	P0DN79	551 aa		18.22	■□□□□ 0.51
PNCK-231	ENST00000488994	DGKA	P23743	735 aa		18.22	■□□□□ 0.51
PNCK-231	ENST00000488994	LSP1	P33241	339 aa		18.22	■□□□□ 0.51
PNCK-231	ENST00000488994	CBS	P35520	551 aa		18.22	■□□□□ 0.51
PNCK-231	ENST00000488994	B4GALNT1	Q00973	533 aa		18.22	■□□□□ 0.51

Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms