RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 TKTL2Q9H0I9 626 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 S1PR5Q9H228 398 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 KCNK15Q9H427 330 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 RIBC2Q9H4K1 309 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 TFB2MQ9H5Q4 396 aaKnown RBP3.38□□□□□ -1.87
PRPF4-203ENST00000488937 RPAP3Q9H6T3 665 aaPredicted RBP3.38□□□□□ -1.87
PRPF4-203ENST00000488937 CRLF2Q9HC73 371 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 Q9N2J8 555 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 GLRX2Q9NS18 164 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 TMEM184CQ9NVA4 438 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 DDX18Q9NVP1 670 aaKnown RBP3.38□□□□□ -1.87
PRPF4-203ENST00000488937 ANKMY1Q9P2S6 941 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 NLKQ9UBE8 527 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 COPG2Q9UBF2 871 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 HEY2Q9UBP5 337 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 SLC25A13Q9UJS0 675 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 GMEB2Q9UKD1 530 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 B3GNT3Q9Y2A9 372 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 CHST2Q9Y4C5 530 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 UBE4BO95155 1302 aa3.38□□□□□ -1.87
PRPF4-203ENST00000488937 C2orf92A0A1B0GVN3 265 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 XKRY2A2RUG3 117 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 DENND3A2RUS2 1198 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 F5H697 171 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 H0YC42 278 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 SOCS6O14544 535 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 TTI1O43156 1089 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 CYTIPO60759 359 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 PRAMEF2O60811 474 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 AK1P00568 194 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 MT-ATP6P00846 226 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 LCATP04180 440 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 ALDOCP09972 364 aaKnown RBP3.37□□□□□ -1.87
PRPF4-203ENST00000488937 TCF4P15884 667 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 PFKFB1P16118 471 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 ITGAXP20702 1163 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 NR4A1P22736 598 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 TKTP29401 623 aaKnown RBP3.37□□□□□ -1.87
PRPF4-203ENST00000488937 GDI1P31150 447 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 RYKP34925 604 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 GMPSP49915 693 aaPredicted RBP3.37□□□□□ -1.87
PRPF4-203ENST00000488937 AGTR2P50052 363 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 CLCNKBP51801 687 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 GPR143P51810 404 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 CLDN2P57739 230 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 EEFSECP57772 596 aaKnown RBP3.37□□□□□ -1.87
PRPF4-203ENST00000488937 HNRNPKP61978 463 aaKnown RBP eCLIP3.37□□□□□ -1.87
PRPF4-203ENST00000488937 MRPS34P82930 218 aaKnown RBP3.37□□□□□ -1.87
PRPF4-203ENST00000488937 GFPT1Q06210 699 aaPredicted RBP3.37□□□□□ -1.87
PRPF4-203ENST00000488937 CYP1B1Q16678 543 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 UGCGQ16739 394 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 EDRF1Q3B7T1 1238 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 KLHL26Q53HC5 615 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 HSP90B2PQ58FF3 399 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 STXBP5Q5T5C0 1151 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 RNASEH2BQ5TBB1 312 aaKnown RBP3.37□□□□□ -1.87
PRPF4-203ENST00000488937 VWA5B1Q5TIE3 1220 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 PRAMEF8Q5VWM4 474 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 KRT39Q6A163 491 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 TXNRD3NBQ6F5E7 133 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 AFTPHQ6ULP2 937 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 QSOX2Q6ZRP7 698 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 PRSS42Q7Z5A4 293 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 VASH2Q86V25 355 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 BATF2Q8N1L9 274 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 ZCCHC7Q8N3Z6 543 aaKnown RBP3.37□□□□□ -1.87
PRPF4-203ENST00000488937 AMER3Q8N944 861 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 TAS1R2Q8TE23 839 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 GDPD5Q8WTR4 605 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 HEXDCQ8WVB3 486 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 KAT2AQ92830 837 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 GLG1Q92896 1179 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 ST6GALNAC6Q969X2 333 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 SLC25A28Q96A46 364 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 EDC3Q96F86 508 aaKnown RBP3.37□□□□□ -1.87
PRPF4-203ENST00000488937 KAZALD1Q96I82 304 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 PIWIL1Q96J94 861 aaKnown RBP3.37□□□□□ -1.87
PRPF4-203ENST00000488937 GDAP1L1Q96MZ0 367 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 MUS81Q96NY9 551 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 FRG2BQ96QU4 278 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 NAP1L3Q99457 506 aaPredicted RBP3.37□□□□□ -1.87
PRPF4-203ENST00000488937 DPCDQ9BVM2 203 aaPredicted RBP3.37□□□□□ -1.87
PRPF4-203ENST00000488937 CINPQ9BW66 212 aaPredicted RBP3.37□□□□□ -1.87
PRPF4-203ENST00000488937 SCNM1Q9BWG6 230 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 R3HDMLQ9H3Y0 253 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 RWDD1Q9H446 243 aaPredicted RBP3.37□□□□□ -1.87
PRPF4-203ENST00000488937 AKIRIN1Q9H9L7 192 aaPredicted RBP3.37□□□□□ -1.87
PRPF4-203ENST00000488937 RNPEPL1Q9HAU8 725 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 TXNRD2Q9NNW7 524 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 FAM118AQ9NWS6 357 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 SLCO1C1Q9NYB5 712 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 GRHL1Q9NZI5 618 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 MAD2L2Q9UI95 211 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 TNFSF13BQ9Y275 285 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 CHTOPQ9Y3Y2 248 aaKnown RBP3.37□□□□□ -1.87
PRPF4-203ENST00000488937 JRKLQ9Y4A0 524 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 MAB21L2Q9Y586 359 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 MAU2Q9Y6X3 613 aa3.37□□□□□ -1.87
PRPF4-203ENST00000488937 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.37□□□□□ -1.87
PRPF4-203ENST00000488937 TTC21BQ7Z4L5 1316 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms