RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 OR4C6Q8NH72 309 aa15.52■□□□□ 0.08
C9orf3-219ENST00000488186 FBXO25Q8TCJ0 367 aa15.52■□□□□ 0.08
C9orf3-219ENST00000488186 CALML6Q8TD86 181 aa15.52■□□□□ 0.08
C9orf3-219ENST00000488186 GPBAR1Q8TDU6 330 aa15.52■□□□□ 0.08
C9orf3-219ENST00000488186 PYROXD1Q8WU10 500 aa15.52■□□□□ 0.08
C9orf3-219ENST00000488186 CNDP2Q96KP4 475 aaKnown RBP15.52■□□□□ 0.08
C9orf3-219ENST00000488186 CAMK1GQ96NX5 476 aa15.52■□□□□ 0.08
C9orf3-219ENST00000488186 FCRL3Q96P31 734 aaPredicted RBP15.52■□□□□ 0.08
C9orf3-219ENST00000488186 RHOXF2Q9BQY4 288 aa15.52■□□□□ 0.08
C9orf3-219ENST00000488186 TRIM56Q9BRZ2 755 aaKnown RBP15.52■□□□□ 0.08
C9orf3-219ENST00000488186 FOXP3Q9BZS1 431 aa15.52■□□□□ 0.08
C9orf3-219ENST00000488186 DPEP2Q9H4A9 486 aa15.52■□□□□ 0.08
C9orf3-219ENST00000488186 OSGEPL1Q9H4B0 414 aa15.52■□□□□ 0.08
C9orf3-219ENST00000488186 VPS37BQ9H9H4 285 aa15.52■□□□□ 0.08
C9orf3-219ENST00000488186 KLC4Q9NSK0 619 aa15.52■□□□□ 0.08
C9orf3-219ENST00000488186 GULP1Q9UBP9 304 aa15.52■□□□□ 0.08
C9orf3-219ENST00000488186 FTSJ1Q9UET6 329 aa15.52■□□□□ 0.08
C9orf3-219ENST00000488186 DMGDHQ9UI17 866 aaKnown RBP15.52■□□□□ 0.08
C9orf3-219ENST00000488186 PLEKHM1Q9Y4G2 1056 aa15.52■□□□□ 0.08
C9orf3-219ENST00000488186 DNMT3AQ9Y6K1 912 aaPredicted RBP15.52■□□□□ 0.08
C9orf3-219ENST00000488186 FAM169AQ9Y6X4 670 aa15.52■□□□□ 0.08
C9orf3-219ENST00000488186 COL5A1P20908 1838 aaPredicted RBP15.52■□□□□ 0.07
C9orf3-219ENST00000488186 QSOX1O00391 747 aa15.51■□□□□ 0.07
C9orf3-219ENST00000488186 CHUKO15111 745 aa15.51■□□□□ 0.07
C9orf3-219ENST00000488186 SIGLEC6O43699 453 aa15.51■□□□□ 0.07
C9orf3-219ENST00000488186 POP7O75817 140 aaKnown RBP15.51■□□□□ 0.07
C9orf3-219ENST00000488186 AP2A2O94973 939 aa15.51■□□□□ 0.07
C9orf3-219ENST00000488186 OR56A5P0C7T3 313 aa15.51■□□□□ 0.07
C9orf3-219ENST00000488186 AK4P27144 223 aaPredicted RBP15.51■□□□□ 0.07
C9orf3-219ENST00000488186 PBLDP30039 288 aaPredicted RBP15.51■□□□□ 0.07
C9orf3-219ENST00000488186 RPIAP49247 311 aa15.51■□□□□ 0.07
C9orf3-219ENST00000488186 DAB2P98082 770 aa15.51■□□□□ 0.07
C9orf3-219ENST00000488186 FOXK2Q01167 660 aa15.51■□□□□ 0.07
C9orf3-219ENST00000488186 BIRC2Q13490 618 aa15.51■□□□□ 0.07
C9orf3-219ENST00000488186 TRADDQ15628 312 aa15.51■□□□□ 0.07
C9orf3-219ENST00000488186 TEX35Q5T0J7 233 aa15.51■□□□□ 0.07
C9orf3-219ENST00000488186 CEP128Q6ZU80 1094 aa15.51■□□□□ 0.07
C9orf3-219ENST00000488186 MICALCLQ6ZW33 695 aa15.51■□□□□ 0.07
C9orf3-219ENST00000488186 KANSL1Q7Z3B3 1105 aa15.51■□□□□ 0.07
C9orf3-219ENST00000488186 GLRX5Q86SX6 157 aa15.51■□□□□ 0.07
C9orf3-219ENST00000488186 AMZ2Q86W34 360 aa15.51■□□□□ 0.07
C9orf3-219ENST00000488186 IFT20Q8IY31 132 aa15.51■□□□□ 0.07
C9orf3-219ENST00000488186 AGGF1Q8N302 714 aaeCLIP15.51■□□□□ 0.07
C9orf3-219ENST00000488186 DEFB124Q8NES8 71 aa15.51■□□□□ 0.07
C9orf3-219ENST00000488186 CCL4L1Q8NHW4 92 aa15.51■□□□□ 0.07
C9orf3-219ENST00000488186 BOCQ9BWV1 1114 aa15.51■□□□□ 0.07
C9orf3-219ENST00000488186 FAM129AQ9BZQ8 928 aa15.51■□□□□ 0.07
C9orf3-219ENST00000488186 NCKIPSDQ9NZQ3 722 aa15.51■□□□□ 0.07
C9orf3-219ENST00000488186 SIRPGQ9P1W8 387 aa15.51■□□□□ 0.07
C9orf3-219ENST00000488186 PCOLCE2Q9UKZ9 415 aa15.51■□□□□ 0.07
C9orf3-219ENST00000488186 KCNK6Q9Y257 313 aa15.51■□□□□ 0.07
C9orf3-219ENST00000488186 VPS9D1Q9Y2B5 631 aa15.51■□□□□ 0.07
C9orf3-219ENST00000488186 BTBD3Q9Y2F9 522 aa15.51■□□□□ 0.07
C9orf3-219ENST00000488186 DNAJC16Q9Y2G8 782 aa15.51■□□□□ 0.07
C9orf3-219ENST00000488186 TEX264Q9Y6I9 313 aa15.51■□□□□ 0.07
C9orf3-219ENST00000488186 GOLGA4Q13439 2230 aaKnown RBP15.5■□□□□ 0.07
C9orf3-219ENST00000488186 ZCWPW2A0A1B0GU75 182 aa15.5■□□□□ 0.07
C9orf3-219ENST00000488186 B4DGG1 531 aa15.5■□□□□ 0.07
C9orf3-219ENST00000488186 TP73O15350 636 aa15.5■□□□□ 0.07
C9orf3-219ENST00000488186 SNX2O60749 519 aa15.5■□□□□ 0.07
C9orf3-219ENST00000488186 KCNJ13O60928 360 aa15.5■□□□□ 0.07
C9orf3-219ENST00000488186 CBFA2T3O75081 653 aa15.5■□□□□ 0.07
C9orf3-219ENST00000488186 ARCN1P48444 511 aaKnown RBP15.5■□□□□ 0.07
C9orf3-219ENST00000488186 DUSP3P51452 185 aaPredicted RBP15.5■□□□□ 0.07
C9orf3-219ENST00000488186 CTSCP53634 463 aa15.5■□□□□ 0.07
C9orf3-219ENST00000488186 CRYMQ14894 314 aa15.5■□□□□ 0.07
C9orf3-219ENST00000488186 TRIP6Q15654 476 aaKnown RBP15.5■□□□□ 0.07
C9orf3-219ENST00000488186 RNF187Q5TA31 235 aaPredicted RBP15.5■□□□□ 0.07
C9orf3-219ENST00000488186 ZCCHC8Q6NZY4 707 aaKnown RBP15.5■□□□□ 0.07
C9orf3-219ENST00000488186 ZNF449Q6P9G9 518 aa15.5■□□□□ 0.07
C9orf3-219ENST00000488186 DGLUCYQ7Z3D6 616 aa15.5■□□□□ 0.07
C9orf3-219ENST00000488186 LDB1Q86U70 411 aaPredicted RBP15.5■□□□□ 0.07
C9orf3-219ENST00000488186 KCNMB4Q86W47 210 aa15.5■□□□□ 0.07
C9orf3-219ENST00000488186 IGDCC3Q8IVU1 814 aa15.5■□□□□ 0.07
C9orf3-219ENST00000488186 LMNTD2Q8IXW0 634 aa15.5■□□□□ 0.07
C9orf3-219ENST00000488186 ZDHHC1Q8WTX9 485 aa15.5■□□□□ 0.07
C9orf3-219ENST00000488186 TCF12Q99081 682 aa15.5■□□□□ 0.07
C9orf3-219ENST00000488186 TIMM29Q9BSF4 260 aa15.5■□□□□ 0.07
C9orf3-219ENST00000488186 FAM167BQ9BTA0 163 aa15.5■□□□□ 0.07
C9orf3-219ENST00000488186 TSSK1BQ9BXA7 367 aa15.5■□□□□ 0.07
C9orf3-219ENST00000488186 TSPYL1Q9H0U9 437 aa15.5■□□□□ 0.07
C9orf3-219ENST00000488186 IARS2Q9NSE4 1012 aaKnown RBP15.5■□□□□ 0.07
C9orf3-219ENST00000488186 TAAR2Q9P1P5 351 aa15.5■□□□□ 0.07
C9orf3-219ENST00000488186 IGLV3-16A0A075B6K0 115 aa15.49■□□□□ 0.07
C9orf3-219ENST00000488186 UBA6A0AVT1 1052 aaPredicted RBP15.49■□□□□ 0.07
C9orf3-219ENST00000488186 KLHL33A6NCF5 533 aa15.49■□□□□ 0.07
C9orf3-219ENST00000488186 E7ESA3 106 aa15.49■□□□□ 0.07
C9orf3-219ENST00000488186 TRIM38O00635 465 aa15.49■□□□□ 0.07
C9orf3-219ENST00000488186 KCNK5O95279 499 aa15.49■□□□□ 0.07
C9orf3-219ENST00000488186 SLC2A4P14672 509 aa15.49■□□□□ 0.07
C9orf3-219ENST00000488186 OGNP20774 298 aaKnown RBP15.49■□□□□ 0.07
C9orf3-219ENST00000488186 IDSP22304 550 aa15.49■□□□□ 0.07
C9orf3-219ENST00000488186 NOVA1P51513 510 aaKnown RBP15.49■□□□□ 0.07
C9orf3-219ENST00000488186 TUBB4BP68371 445 aa15.49■□□□□ 0.07
C9orf3-219ENST00000488186 B4GALNT1Q00973 533 aa15.49■□□□□ 0.07
C9orf3-219ENST00000488186 CUL1Q13616 776 aa15.49■□□□□ 0.07
C9orf3-219ENST00000488186 NR0B2Q15466 257 aa15.49■□□□□ 0.07
C9orf3-219ENST00000488186 BCL7AQ4VC05 210 aa15.49■□□□□ 0.07
C9orf3-219ENST00000488186 HSP90AA5PQ58FG0 334 aa15.49■□□□□ 0.07
C9orf3-219ENST00000488186 C6orf132Q5T0Z8 1188 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms