RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 FAM87AP0C7U9 286 aa12.24□□□□□ -0.45
SREBF1-215ENST00000487401 UGT1A6P19224 532 aa12.24□□□□□ -0.45
SREBF1-215ENST00000487401 UGT1A1P22309 533 aa12.24□□□□□ -0.45
SREBF1-215ENST00000487401 UGT1A4P22310 534 aa12.24□□□□□ -0.45
SREBF1-215ENST00000487401 CTNNA2P26232 953 aa12.24□□□□□ -0.45
SREBF1-215ENST00000487401 CETN2P41208 172 aa12.24□□□□□ -0.45
SREBF1-215ENST00000487401 CHRNA4P43681 627 aa12.24□□□□□ -0.45
SREBF1-215ENST00000487401 MARCKSL1P49006 195 aa12.24□□□□□ -0.45
SREBF1-215ENST00000487401 DRG2P55039 364 aaKnown RBP12.24□□□□□ -0.45
SREBF1-215ENST00000487401 GEMP55040 296 aa12.24□□□□□ -0.45
SREBF1-215ENST00000487401 FOXM1Q08050 763 aa12.24□□□□□ -0.45
SREBF1-215ENST00000487401 XRCC4Q13426 336 aa12.24□□□□□ -0.45
SREBF1-215ENST00000487401 SLC1A5Q15758 541 aa12.24□□□□□ -0.45
SREBF1-215ENST00000487401 KHDC1Q4VXA5 237 aaKnown RBP12.24□□□□□ -0.45
SREBF1-215ENST00000487401 ITPRIPL1Q6GPH6 555 aa12.24□□□□□ -0.45
SREBF1-215ENST00000487401 FAM151BQ6UXP7 276 aa12.24□□□□□ -0.45
SREBF1-215ENST00000487401 BBS12Q6ZW61 710 aa12.24□□□□□ -0.45
SREBF1-215ENST00000487401 PRICKLE2Q7Z3G6 844 aa12.24□□□□□ -0.45
SREBF1-215ENST00000487401 AMZ2Q86W34 360 aa12.24□□□□□ -0.45
SREBF1-215ENST00000487401 ZNF547Q8IVP9 402 aa12.24□□□□□ -0.45
SREBF1-215ENST00000487401 COL27A1Q8IZC6 1860 aaPredicted RBP12.24□□□□□ -0.45
SREBF1-215ENST00000487401 DTX3LQ8TDB6 740 aa12.24□□□□□ -0.45
SREBF1-215ENST00000487401 KRT35Q92764 455 aa12.24□□□□□ -0.45
SREBF1-215ENST00000487401 ZDHHC12Q96GR4 267 aa12.24□□□□□ -0.45
SREBF1-215ENST00000487401 C9orf72Q96LT7 481 aa12.24□□□□□ -0.45
SREBF1-215ENST00000487401 TGM7Q96PF1 710 aa12.24□□□□□ -0.45
SREBF1-215ENST00000487401 EFHD1Q9BUP0 239 aa12.24□□□□□ -0.45
SREBF1-215ENST00000487401 SLC12A9Q9BXP2 914 aa12.24□□□□□ -0.45
SREBF1-215ENST00000487401 TRIT1Q9H3H1 467 aaKnown RBP12.24□□□□□ -0.45
SREBF1-215ENST00000487401 GPN2Q9H9Y4 310 aaPredicted RBP12.24□□□□□ -0.45
SREBF1-215ENST00000487401 UGT1A7Q9HAW7 530 aa12.24□□□□□ -0.45
SREBF1-215ENST00000487401 UGT1A10Q9HAW8 530 aa12.24□□□□□ -0.45
SREBF1-215ENST00000487401 UGT1A8Q9HAW9 530 aa12.24□□□□□ -0.45
SREBF1-215ENST00000487401 IL17CQ9P0M4 197 aa12.24□□□□□ -0.45
SREBF1-215ENST00000487401 PILRAQ9UKJ1 303 aa12.24□□□□□ -0.45
SREBF1-215ENST00000487401 TFR2Q9UP52 801 aa12.24□□□□□ -0.45
SREBF1-215ENST00000487401 SLC30A1Q9Y6M5 507 aa12.24□□□□□ -0.45
SREBF1-215ENST00000487401 MN1Q10571 1320 aaPredicted RBP12.23□□□□□ -0.45
SREBF1-215ENST00000487401 MACROD2A1Z1Q3 448 aa12.23□□□□□ -0.45
SREBF1-215ENST00000487401 OR52A4PA6NMU1 304 aa12.23□□□□□ -0.45
SREBF1-215ENST00000487401 C2orf81A6NN90 581 aa12.23□□□□□ -0.45
SREBF1-215ENST00000487401 APOC4-APOC2K7ER74 178 aa12.23□□□□□ -0.45
SREBF1-215ENST00000487401 TOX3O15405 576 aaPredicted RBP12.23□□□□□ -0.45
SREBF1-215ENST00000487401 BUD23O43709 281 aaKnown RBP12.23□□□□□ -0.45
SREBF1-215ENST00000487401 ANXA9O76027 345 aa12.23□□□□□ -0.45
SREBF1-215ENST00000487401 STK17BO94768 372 aa12.23□□□□□ -0.45
SREBF1-215ENST00000487401 AGTP01019 485 aa12.23□□□□□ -0.45
SREBF1-215ENST00000487401 APOC2P02655 101 aa12.23□□□□□ -0.45
SREBF1-215ENST00000487401 ANKRD34CP0C6C1 535 aa12.23□□□□□ -0.45
SREBF1-215ENST00000487401 BRAFP15056 766 aa12.23□□□□□ -0.45
SREBF1-215ENST00000487401 MSH3P20585 1137 aa12.23□□□□□ -0.45
SREBF1-215ENST00000487401 RBL1P28749 1068 aa12.23□□□□□ -0.45
SREBF1-215ENST00000487401 SEPHS1P49903 392 aa12.23□□□□□ -0.45
SREBF1-215ENST00000487401 GFERP55789 205 aa12.23□□□□□ -0.45
SREBF1-215ENST00000487401 COPS2P61201 443 aa12.23□□□□□ -0.45
SREBF1-215ENST00000487401 ITGA9Q13797 1035 aa12.23□□□□□ -0.45
SREBF1-215ENST00000487401 PRPSAP1Q14558 356 aa12.23□□□□□ -0.45
SREBF1-215ENST00000487401 BORAQ6PGQ7 559 aa12.23□□□□□ -0.45
SREBF1-215ENST00000487401 TMEM220Q6QAJ8 160 aa12.23□□□□□ -0.45
SREBF1-215ENST00000487401 TMTC1Q8IUR5 882 aa12.23□□□□□ -0.45
SREBF1-215ENST00000487401 FICDQ9BVA6 458 aa12.23□□□□□ -0.45
SREBF1-215ENST00000487401 C10orf88Q9H8K7 445 aa12.23□□□□□ -0.45
SREBF1-215ENST00000487401 APMAPQ9HDC9 416 aa12.23□□□□□ -0.45
SREBF1-215ENST00000487401 SLC40A1Q9NP59 571 aa12.23□□□□□ -0.45
SREBF1-215ENST00000487401 OGFRQ9NZT2 677 aa12.23□□□□□ -0.45
SREBF1-215ENST00000487401 PCDHA3Q9Y5H8 950 aa12.23□□□□□ -0.45
SREBF1-215ENST00000487401 EPN1Q9Y6I3 576 aaPredicted RBP12.23□□□□□ -0.45
SREBF1-215ENST00000487401 ZNF462Q96JM2 2506 aa12.23□□□□□ -0.45
SREBF1-215ENST00000487401 ATMQ13315 3056 aa12.23□□□□□ -0.45
SREBF1-215ENST00000487401 PRR19A6NJB7 356 aa12.22□□□□□ -0.45
SREBF1-215ENST00000487401 C9P02748 559 aa12.22□□□□□ -0.45
SREBF1-215ENST00000487401 AKT1P31749 480 aa12.22□□□□□ -0.45
SREBF1-215ENST00000487401 LEPRP48357 1165 aaKnown RBP12.22□□□□□ -0.45
SREBF1-215ENST00000487401 GPR18Q14330 331 aa12.22□□□□□ -0.45
SREBF1-215ENST00000487401 CLCA4Q14CN2 919 aa12.22□□□□□ -0.45
SREBF1-215ENST00000487401 LONRF2Q1L5Z9 754 aa12.22□□□□□ -0.45
SREBF1-215ENST00000487401 GPRC6AQ5T6X5 926 aa12.22□□□□□ -0.45
SREBF1-215ENST00000487401 CACHD1Q5VU97 1274 aa12.22□□□□□ -0.45
SREBF1-215ENST00000487401 IRGCQ6NXR0 463 aa12.22□□□□□ -0.45
SREBF1-215ENST00000487401 DARS2Q6PI48 645 aaKnown RBP12.22□□□□□ -0.45
SREBF1-215ENST00000487401 C11orf96Q7Z7L8 435 aa12.22□□□□□ -0.45
SREBF1-215ENST00000487401 CDKL3Q8IVW4 592 aaPredicted RBP12.22□□□□□ -0.45
SREBF1-215ENST00000487401 RASGEF1AQ8N9B8 481 aa12.22□□□□□ -0.45
SREBF1-215ENST00000487401 DDHD1Q8NEL9 900 aa12.22□□□□□ -0.45
SREBF1-215ENST00000487401 ZNF398Q8TD17 642 aa12.22□□□□□ -0.45
SREBF1-215ENST00000487401 SLC45A3Q96JT2 553 aa12.22□□□□□ -0.45
SREBF1-215ENST00000487401 ZNF514Q96K75 400 aaPredicted RBP12.22□□□□□ -0.45
SREBF1-215ENST00000487401 CATSPER2Q96P56 530 aa12.22□□□□□ -0.45
SREBF1-215ENST00000487401 PANX2Q96RD6 677 aa12.22□□□□□ -0.45
SREBF1-215ENST00000487401 SPRY4Q9C004 299 aa12.22□□□□□ -0.45
SREBF1-215ENST00000487401 GBA3Q9H227 469 aa12.22□□□□□ -0.45
SREBF1-215ENST00000487401 STARD5Q9NSY2 213 aa12.22□□□□□ -0.45
SREBF1-215ENST00000487401 GEMIN8Q9NWZ8 242 aaKnown RBP12.22□□□□□ -0.45
SREBF1-215ENST00000487401 EFR3BQ9Y2G0 817 aa12.22□□□□□ -0.45
SREBF1-215ENST00000487401 AAR2Q9Y312 384 aaKnown RBP12.22□□□□□ -0.45
SREBF1-215ENST00000487401 DNMT3AQ9Y6K1 912 aaPredicted RBP12.22□□□□□ -0.45
SREBF1-215ENST00000487401 LOC101059948A0A1B0GTJ6 334 aa12.21□□□□□ -0.45
SREBF1-215ENST00000487401 OR2AG2A6NM03 316 aa12.21□□□□□ -0.45
SREBF1-215ENST00000487401 NKX2-8O15522 239 aa12.21□□□□□ -0.45
SREBF1-215ENST00000487401 TJP3O95049 919 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms