RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 SMOXQ9NWM0 555 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 CACNA2D2Q9NY47 1150 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 KLHL42Q9P2K6 505 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 VTI1BQ9UEU0 232 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 SARDHQ9UL12 918 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 APOBEC2Q9Y235 224 aaKnown RBP6.97□□□□□ -1.29
SF3A3-206ENST00000487062 MED16Q9Y2X0 877 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 RAP2CQ9Y3L5 183 aa6.97□□□□□ -1.29
SF3A3-206ENST00000487062 COL4A2P08572 1712 aa6.96□□□□□ -1.29
SF3A3-206ENST00000487062 IGLV3-16A0A075B6K0 115 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 SUPT3HB4E1H0 165 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 SPECC1L-ADORA2AF8WAN1 911 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 BTN3A1O00481 513 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 AREL1O15033 823 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 GPR39O43194 453 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 MBTPS2O43462 519 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 CCDC22O60826 627 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 SUPT3HO75486 399 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 ATP5HO75947 161 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 AP2A2O94973 939 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 SLC25A14O95258 325 aaPredicted RBP6.96□□□□□ -1.3
SF3A3-206ENST00000487062 TRIM16O95361 564 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 S100BP04271 92 aaPredicted RBP6.96□□□□□ -1.3
SF3A3-206ENST00000487062 CBSLP0DN79 551 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 BMP1P13497 986 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 ENO3P13929 434 aaPredicted RBP6.96□□□□□ -1.3
SF3A3-206ENST00000487062 GFAPP14136 432 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 ATP1B2P14415 290 aaPredicted RBP6.96□□□□□ -1.3
SF3A3-206ENST00000487062 JUNDP17535 347 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 IMPDH1P20839 514 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 DRD1P21728 446 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 NTSR1P30989 418 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 CTHP32929 405 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 CBSP35520 551 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 ETV3P41162 512 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 RGS19P49795 217 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 RPL14P50914 215 aaKnown RBP6.96□□□□□ -1.3
SF3A3-206ENST00000487062 CLCN7P51798 805 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 AQP5P55064 265 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 GALNT1Q10472 559 aaPredicted RBP6.96□□□□□ -1.3
SF3A3-206ENST00000487062 SFSWAPQ12872 951 aaKnown RBP6.96□□□□□ -1.3
SF3A3-206ENST00000487062 CAMK2GQ13555 558 aaPredicted RBP6.96□□□□□ -1.3
SF3A3-206ENST00000487062 OR4D1Q15615 310 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 AAK1Q2M2I8 961 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 SETMARQ53H47 684 aaPredicted RBP6.96□□□□□ -1.3
SF3A3-206ENST00000487062 SPDYAQ5MJ70 313 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 GPRC6AQ5T6X5 926 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 HENMT1Q5T8I9 393 aaKnown RBP6.96□□□□□ -1.3
SF3A3-206ENST00000487062 CES4AQ5XG92 561 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 ZNF776Q68DI1 518 aaPredicted RBP6.96□□□□□ -1.3
SF3A3-206ENST00000487062 NAIF1Q69YI7 327 aaPredicted RBP6.96□□□□□ -1.3
SF3A3-206ENST00000487062 TXNDC11Q6PKC3 985 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 NAPRTQ6XQN6 538 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 TRIM67Q6ZTA4 783 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 FRA10AC1Q70Z53 315 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 ADAMTSL2Q86TH1 951 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 LAPTM4BQ86VI4 370 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 NLRP8Q86W28 1048 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 GPSM1Q86YR5 675 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 SFTPA1Q8IWL2 248 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 CPNE9Q8IYJ1 553 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 FBXO39Q8N4B4 442 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 ZBTB2Q8N680 514 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 DDHD1Q8NEL9 900 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 EEF1AKMT1Q8WVE0 214 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 EXT2Q93063 718 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 PTERQ96BW5 349 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 AP2M1Q96CW1 435 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 NUS1Q96E22 293 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 PHF21BQ96EK2 531 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 L3HYPDHQ96EM0 354 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 DTD2Q96FN9 168 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 MSANTD3Q96H12 275 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 FAR2Q96K12 515 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 RMDN2Q96LZ7 410 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 COQ10AQ96MF6 247 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 RILPQ96NA2 401 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 ATOH8Q96SQ7 321 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 SORT1Q99523 831 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 TUBB6Q9BUF5 446 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 WRAP53Q9BUR4 548 aaKnown RBP6.96□□□□□ -1.3
SF3A3-206ENST00000487062 RIOK2Q9BVS4 552 aaKnown RBP6.96□□□□□ -1.3
SF3A3-206ENST00000487062 BOCQ9BWV1 1114 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 FAM126AQ9BYI3 521 aaPredicted RBP6.96□□□□□ -1.3
SF3A3-206ENST00000487062 ZCCHC2Q9C0B9 1178 aaKnown RBP6.96□□□□□ -1.3
SF3A3-206ENST00000487062 C20orf27Q9GZN8 174 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 RSPH9Q9H1X1 276 aaPredicted RBP6.96□□□□□ -1.3
SF3A3-206ENST00000487062 ABCG8Q9H221 673 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 ZNF395Q9H8N7 513 aaPredicted RBP6.96□□□□□ -1.3
SF3A3-206ENST00000487062 KCNK13Q9HB14 408 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 CYP4F12Q9HCS2 524 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 ABCF3Q9NUQ8 709 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 DNAJC28Q9NX36 388 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 NUDT4Q9NZJ9 180 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 HEY2Q9UBP5 337 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 MARCOQ9UEW3 520 aaPredicted RBP6.96□□□□□ -1.3
SF3A3-206ENST00000487062 CD84Q9UIB8 345 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 ZFP69BQ9UJL9 534 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 HAO1Q9UJM8 370 aa6.96□□□□□ -1.3
SF3A3-206ENST00000487062 PABPN1LA6NDY0 278 aaKnown RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms