RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 PAK1IP1Q9NWT1 392 aaPredicted RBP12.26□□□□□ -0.45
HSPG2-211ENST00000486901 GDAP2Q9NXN4 497 aa12.26□□□□□ -0.45
HSPG2-211ENST00000486901 FBXO10Q9UK96 956 aa12.26□□□□□ -0.45
HSPG2-211ENST00000486901 CPQQ9Y646 472 aa12.26□□□□□ -0.45
HSPG2-211ENST00000486901 TRIP12Q14669 1992 aaPredicted RBP12.26□□□□□ -0.45
HSPG2-211ENST00000486901 DNAJC25-GNG10A0A024R161 153 aa12.26□□□□□ -0.45
HSPG2-211ENST00000486901 A0A1W2PP18 115 aa12.26□□□□□ -0.45
HSPG2-211ENST00000486901 A0A1W2PQH9 124 aa12.26□□□□□ -0.45
HSPG2-211ENST00000486901 TCRBV5S2A0A599 114 aa12.26□□□□□ -0.45
HSPG2-211ENST00000486901 PSMD11O00231 422 aa12.26□□□□□ -0.45
HSPG2-211ENST00000486901 PRKD3O94806 890 aa12.26□□□□□ -0.45
HSPG2-211ENST00000486901 ABCB1P08183 1280 aaPredicted RBP12.26□□□□□ -0.45
HSPG2-211ENST00000486901 LEPRP48357 1165 aaKnown RBP12.26□□□□□ -0.45
HSPG2-211ENST00000486901 PSMD8P48556 350 aa12.26□□□□□ -0.45
HSPG2-211ENST00000486901 FAM189BP81408 668 aa12.26□□□□□ -0.45
HSPG2-211ENST00000486901 DMPKQ09013 629 aa12.26□□□□□ -0.45
HSPG2-211ENST00000486901 INAVAQ3KP66 663 aa12.26□□□□□ -0.45
HSPG2-211ENST00000486901 IQSEC1Q6DN90 963 aa12.26□□□□□ -0.45
HSPG2-211ENST00000486901 PAGE2Q7Z2X7 111 aa12.26□□□□□ -0.45
HSPG2-211ENST00000486901 SPRED1Q7Z699 444 aa12.26□□□□□ -0.45
HSPG2-211ENST00000486901 ZNF598Q86UK7 904 aaKnown RBP12.26□□□□□ -0.45
HSPG2-211ENST00000486901 PHYKPLQ8IUZ5 450 aa12.26□□□□□ -0.45
HSPG2-211ENST00000486901 SLC35B4Q969S0 331 aa12.26□□□□□ -0.45
HSPG2-211ENST00000486901 TSPAN17Q96FV3 270 aa12.26□□□□□ -0.45
HSPG2-211ENST00000486901 SH3YL1Q96HL8 342 aaPredicted RBP12.26□□□□□ -0.45
HSPG2-211ENST00000486901 SDR39U1Q9NRG7 319 aaPredicted RBP12.26□□□□□ -0.45
HSPG2-211ENST00000486901 TBCCD1Q9NVR7 557 aa12.26□□□□□ -0.45
HSPG2-211ENST00000486901 GIN1Q9NXP7 522 aa12.26□□□□□ -0.45
HSPG2-211ENST00000486901 ERVK-18Q9QC07 812 aa12.26□□□□□ -0.45
HSPG2-211ENST00000486901 CAB39Q9Y376 341 aaPredicted RBP12.26□□□□□ -0.45
HSPG2-211ENST00000486901 SNX5Q9Y5X3 404 aa12.26□□□□□ -0.45
HSPG2-211ENST00000486901 GPR45Q9Y5Y3 372 aa12.26□□□□□ -0.45
HSPG2-211ENST00000486901 CNTRLQ7Z7A1 2325 aa12.26□□□□□ -0.45
HSPG2-211ENST00000486901 H0YJX3 145 aa12.25□□□□□ -0.45
HSPG2-211ENST00000486901 MUSKO15146 869 aa12.25□□□□□ -0.45
HSPG2-211ENST00000486901 SULT1C4O75897 302 aa12.25□□□□□ -0.45
HSPG2-211ENST00000486901 MYO1DO94832 1006 aa12.25□□□□□ -0.45
HSPG2-211ENST00000486901 ZNF37AP17032 561 aaPredicted RBP12.25□□□□□ -0.45
HSPG2-211ENST00000486901 KYAT1Q16773 422 aa12.25□□□□□ -0.45
HSPG2-211ENST00000486901 PTPRNQ16849 979 aa12.25□□□□□ -0.45
HSPG2-211ENST00000486901 DET1Q7L5Y6 550 aa12.25□□□□□ -0.45
HSPG2-211ENST00000486901 THAP5Q7Z6K1 395 aa12.25□□□□□ -0.45
HSPG2-211ENST00000486901 ADCK1Q86TW2 530 aa12.25□□□□□ -0.45
HSPG2-211ENST00000486901 SLC22A16Q86VW1 577 aa12.25□□□□□ -0.45
HSPG2-211ENST00000486901 ZCCHC7Q8N3Z6 543 aaKnown RBP12.25□□□□□ -0.45
HSPG2-211ENST00000486901 MINDY1Q8N5J2 469 aa12.25□□□□□ -0.45
HSPG2-211ENST00000486901 CDC26Q8NHZ8 85 aa12.25□□□□□ -0.45
HSPG2-211ENST00000486901 CAPSLQ8WWF8 208 aa12.25□□□□□ -0.45
HSPG2-211ENST00000486901 FAM162AQ96A26 154 aa12.25□□□□□ -0.45
HSPG2-211ENST00000486901 ZUFSPQ96AP4 578 aa12.25□□□□□ -0.45
HSPG2-211ENST00000486901 CCDC68Q9H2F9 335 aa12.25□□□□□ -0.45
HSPG2-211ENST00000486901 RIC8BQ9NVN3 520 aa12.25□□□□□ -0.45
HSPG2-211ENST00000486901 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.25□□□□□ -0.45
HSPG2-211ENST00000486901 LSM1O15116 133 aaKnown RBP12.25□□□□□ -0.45
HSPG2-211ENST00000486901 ZNF12P17014 697 aa12.25□□□□□ -0.45
HSPG2-211ENST00000486901 PFKLP17858 780 aa12.25□□□□□ -0.45
HSPG2-211ENST00000486901 TCEA1P23193 301 aaKnown RBP12.25□□□□□ -0.45
HSPG2-211ENST00000486901 CRHBPP24387 322 aa12.25□□□□□ -0.45
HSPG2-211ENST00000486901 DGKEP52429 567 aa12.25□□□□□ -0.45
HSPG2-211ENST00000486901 SF3B4Q15427 424 aaKnown RBP eCLIP12.25□□□□□ -0.458e-9■■■■□ 24.6
HSPG2-211ENST00000486901 SOWAHCQ53LP3 525 aaPredicted RBP12.25□□□□□ -0.45
HSPG2-211ENST00000486901 CATSPEREQ5SY80 951 aa12.25□□□□□ -0.45
HSPG2-211ENST00000486901 KRTCAP2Q8N6L1 136 aa12.25□□□□□ -0.45
HSPG2-211ENST00000486901 METTL6Q8TCB7 284 aa12.25□□□□□ -0.45
HSPG2-211ENST00000486901 MYEOVQ96EZ4 313 aa12.25□□□□□ -0.45
HSPG2-211ENST00000486901 NRBF2Q96F24 287 aa12.25□□□□□ -0.45
HSPG2-211ENST00000486901 ALPK1Q96QP1 1244 aa12.25□□□□□ -0.45
HSPG2-211ENST00000486901 SMOC2Q9H3U7 446 aa12.25□□□□□ -0.45
HSPG2-211ENST00000486901 SPC25Q9HBM1 224 aa12.25□□□□□ -0.45
HSPG2-211ENST00000486901 FARSBQ9NSD9 589 aaKnown RBP12.25□□□□□ -0.45
HSPG2-211ENST00000486901 OSER1Q9NX31 292 aa12.25□□□□□ -0.45
HSPG2-211ENST00000486901 VAPAQ9P0L0 249 aa12.25□□□□□ -0.45
HSPG2-211ENST00000486901 ABCD2Q9UBJ2 740 aa12.25□□□□□ -0.45
HSPG2-211ENST00000486901 ADGRE2Q9UHX3 823 aa12.25□□□□□ -0.45
HSPG2-211ENST00000486901 PDE10AQ9Y233 779 aa12.25□□□□□ -0.45
HSPG2-211ENST00000486901 TMA7Q9Y2S6 64 aaKnown RBP12.25□□□□□ -0.45
HSPG2-211ENST00000486901 HSD17B1P14061 328 aa12.25□□□□□ -0.45
HSPG2-211ENST00000486901 SLC2A4P14672 509 aa12.25□□□□□ -0.45
HSPG2-211ENST00000486901 EPHA2P29317 976 aa12.25□□□□□ -0.45
HSPG2-211ENST00000486901 GRK4P32298 578 aa12.25□□□□□ -0.45
HSPG2-211ENST00000486901 ACADVLP49748 655 aa12.25□□□□□ -0.45
HSPG2-211ENST00000486901 ADARB1P78563 741 aaKnown RBP12.25□□□□□ -0.45
HSPG2-211ENST00000486901 TIAL1Q01085 375 aaKnown RBP eCLIP12.25□□□□□ -0.456e-8■□□□□ 10.7
HSPG2-211ENST00000486901 VAC14Q08AM6 782 aa12.25□□□□□ -0.45
HSPG2-211ENST00000486901 BNIP2Q12982 314 aa12.25□□□□□ -0.45
HSPG2-211ENST00000486901 DAG1Q14118 895 aa12.25□□□□□ -0.45
HSPG2-211ENST00000486901 FSCN1Q16658 493 aaKnown RBP12.25□□□□□ -0.45
HSPG2-211ENST00000486901 ANKS6Q68DC2 871 aa12.25□□□□□ -0.45
HSPG2-211ENST00000486901 TBC1D21Q8IYX1 336 aa12.25□□□□□ -0.45
HSPG2-211ENST00000486901 PGBD5Q8N414 524 aa12.25□□□□□ -0.45
HSPG2-211ENST00000486901 APOL5Q9BWW9 433 aa12.25□□□□□ -0.45
HSPG2-211ENST00000486901 PCDH10Q9P2E7 1040 aa12.25□□□□□ -0.45
HSPG2-211ENST00000486901 HTTP42858 3142 aa12.24□□□□□ -0.45
HSPG2-211ENST00000486901 KRT87PA6NCN2 255 aa12.24□□□□□ -0.45
HSPG2-211ENST00000486901 LRATO95237 230 aa12.24□□□□□ -0.45
HSPG2-211ENST00000486901 SLC25A27O95847 323 aa12.24□□□□□ -0.45
HSPG2-211ENST00000486901 MYCLP1P12525 358 aaPredicted RBP12.24□□□□□ -0.45
HSPG2-211ENST00000486901 WARSP23381 471 aaKnown RBP12.24□□□□□ -0.45
HSPG2-211ENST00000486901 RPS12P25398 132 aaKnown RBP12.24□□□□□ -0.45
HSPG2-211ENST00000486901 RPL34P49207 117 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms