RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 SLC23A2Q9UGH3 650 aa11.67□□□□□ -0.54
HPS4-214ENST00000485842 PADI4Q9UM07 663 aa11.67□□□□□ -0.54
HPS4-214ENST00000485842 UTP11Q9Y3A2 253 aaKnown RBP11.67□□□□□ -0.54
HPS4-214ENST00000485842 RPS6KL1Q9Y6S9 549 aa11.67□□□□□ -0.54
HPS4-214ENST00000485842 SPTBN2O15020 2390 aa11.67□□□□□ -0.54
HPS4-214ENST00000485842 IGLV3-16A0A075B6K0 115 aa11.66□□□□□ -0.54
HPS4-214ENST00000485842 TRBV23OR9-2A0A075B6M9 112 aa11.66□□□□□ -0.54
HPS4-214ENST00000485842 FAM237BA0A1B0GVD1 139 aa11.66□□□□□ -0.54
HPS4-214ENST00000485842 CTAGE15A4D2H0 777 aa11.66□□□□□ -0.54
HPS4-214ENST00000485842 PDZK1P1A8MUH7 402 aa11.66□□□□□ -0.54
HPS4-214ENST00000485842 GOLGA8KD6RF30 607 aa11.66□□□□□ -0.54
HPS4-214ENST00000485842 GOLGA8TH3BQL2 631 aa11.66□□□□□ -0.54
HPS4-214ENST00000485842 SMAPO00193 183 aa11.66□□□□□ -0.54
HPS4-214ENST00000485842 NDC80O14777 642 aa11.66□□□□□ -0.54
HPS4-214ENST00000485842 CD3EAPO15446 510 aaKnown RBP11.66□□□□□ -0.54
HPS4-214ENST00000485842 NOBOXO60393 691 aa11.66□□□□□ -0.54
HPS4-214ENST00000485842 POP7O75817 140 aaKnown RBP11.66□□□□□ -0.54
HPS4-214ENST00000485842 CTAGE8P0CG41 777 aa11.66□□□□□ -0.54
HPS4-214ENST00000485842 ATP1B2P14415 290 aaPredicted RBP11.66□□□□□ -0.54
HPS4-214ENST00000485842 VCLP18206 1134 aa11.66□□□□□ -0.54
HPS4-214ENST00000485842 ACP1P24666 158 aa11.66□□□□□ -0.54
HPS4-214ENST00000485842 ARNTP27540 789 aa11.66□□□□□ -0.54
HPS4-214ENST00000485842 ARL4CP56559 192 aa11.66□□□□□ -0.54
HPS4-214ENST00000485842 FOXC1Q12948 553 aa11.66□□□□□ -0.54
HPS4-214ENST00000485842 BIRC2Q13490 618 aa11.66□□□□□ -0.54
HPS4-214ENST00000485842 SEMA3AQ14563 771 aa11.66□□□□□ -0.54
HPS4-214ENST00000485842 ITIH4Q14624 930 aa11.66□□□□□ -0.54
HPS4-214ENST00000485842 HIF1AQ16665 826 aa11.66□□□□□ -0.54
HPS4-214ENST00000485842 ANKRD20A4Q4UJ75 823 aa11.66□□□□□ -0.54
HPS4-214ENST00000485842 MSS51Q4VC12 460 aa11.66□□□□□ -0.54
HPS4-214ENST00000485842 C14orf28Q4W4Y0 310 aa11.66□□□□□ -0.54
HPS4-214ENST00000485842 AARS2Q5JTZ9 985 aaKnown RBP11.66□□□□□ -0.54
HPS4-214ENST00000485842 HP1BP3Q5SSJ5 553 aaPredicted RBP11.66□□□□□ -0.54
HPS4-214ENST00000485842 PERM1Q5SV97 790 aa11.66□□□□□ -0.54
HPS4-214ENST00000485842 C11orf96Q7Z7L8 435 aa11.66□□□□□ -0.54
HPS4-214ENST00000485842 CTAGE6Q86UF2 777 aa11.66□□□□□ -0.54
HPS4-214ENST00000485842 AMZ2Q86W34 360 aa11.66□□□□□ -0.54
HPS4-214ENST00000485842 CTAGE4Q8IX94 777 aa11.66□□□□□ -0.54
HPS4-214ENST00000485842 PDIK1LQ8N165 341 aa11.66□□□□□ -0.54
HPS4-214ENST00000485842 CLDN19Q8N6F1 224 aa11.66□□□□□ -0.54
HPS4-214ENST00000485842 BBOF1Q8ND07 529 aa11.66□□□□□ -0.54
HPS4-214ENST00000485842 GPR156Q8NFN8 814 aa11.66□□□□□ -0.54
HPS4-214ENST00000485842 IFI44Q8TCB0 444 aa11.66□□□□□ -0.54
HPS4-214ENST00000485842 ZNF514Q96K75 400 aaPredicted RBP11.66□□□□□ -0.54
HPS4-214ENST00000485842 TTC1Q99614 292 aa11.66□□□□□ -0.54
HPS4-214ENST00000485842 SYNDIG1Q9H7V2 258 aa11.66□□□□□ -0.54
HPS4-214ENST00000485842 PRDM8Q9NQV8 689 aa11.66□□□□□ -0.54
HPS4-214ENST00000485842 IL1RAPL1Q9NZN1 696 aa11.66□□□□□ -0.54
HPS4-214ENST00000485842 MARCH4Q9P2E8 410 aaPredicted RBP11.66□□□□□ -0.54
HPS4-214ENST00000485842 TBC1D29Q9UFV1 150 aa11.66□□□□□ -0.54
HPS4-214ENST00000485842 CHMP2BQ9UQN3 213 aa11.66□□□□□ -0.54
HPS4-214ENST00000485842 MAGEB16A2A368 324 aa11.65□□□□□ -0.54
HPS4-214ENST00000485842 SGTAO43765 313 aa11.65□□□□□ -0.54
HPS4-214ENST00000485842 EML2O95834 649 aa11.65□□□□□ -0.54
HPS4-214ENST00000485842 POLBP06746 335 aa11.65□□□□□ -0.54
HPS4-214ENST00000485842 PGAM1P18669 254 aa11.65□□□□□ -0.54
HPS4-214ENST00000485842 IDSP22304 550 aa11.65□□□□□ -0.54
HPS4-214ENST00000485842 PMLP29590 882 aa11.65□□□□□ -0.54
HPS4-214ENST00000485842 PPARGP37231 505 aaPredicted RBP11.65□□□□□ -0.54
HPS4-214ENST00000485842 ELK3P41970 407 aa11.65□□□□□ -0.54
HPS4-214ENST00000485842 NSG1P42857 185 aa11.65□□□□□ -0.54
HPS4-214ENST00000485842 PRLHRP49683 370 aa11.65□□□□□ -0.54
HPS4-214ENST00000485842 DRG2P55039 364 aaKnown RBP11.65□□□□□ -0.54
HPS4-214ENST00000485842 CLDN6P56747 220 aa11.65□□□□□ -0.54
HPS4-214ENST00000485842 SLC7A5Q01650 507 aa11.65□□□□□ -0.54
HPS4-214ENST00000485842 NFE2L1Q14494 772 aa11.65□□□□□ -0.54
HPS4-214ENST00000485842 BCL7AQ4VC05 210 aa11.65□□□□□ -0.54
HPS4-214ENST00000485842 LYPLAL1Q5VWZ2 237 aa11.65□□□□□ -0.54
HPS4-214ENST00000485842 ARMC3Q5W041 872 aa11.65□□□□□ -0.54
HPS4-214ENST00000485842 DUPD1Q68J44 220 aa11.65□□□□□ -0.54
HPS4-214ENST00000485842 OGFOD3Q6PK18 319 aa11.65□□□□□ -0.54
HPS4-214ENST00000485842 DHRS13Q6UX07 377 aa11.65□□□□□ -0.54
HPS4-214ENST00000485842 CERS6Q6ZMG9 384 aa11.65□□□□□ -0.54
HPS4-214ENST00000485842 NAGSQ8N159 534 aa11.65□□□□□ -0.54
HPS4-214ENST00000485842 NOA1Q8NC60 698 aaKnown RBP11.65□□□□□ -0.54
HPS4-214ENST00000485842 NAT6Q93015 286 aa11.65□□□□□ -0.54
HPS4-214ENST00000485842 CCDC74AQ96AQ1 378 aa11.65□□□□□ -0.54
HPS4-214ENST00000485842 CFAP36Q96G28 342 aa11.65□□□□□ -0.54
HPS4-214ENST00000485842 FCRL3Q96P31 734 aaPredicted RBP11.65□□□□□ -0.54
HPS4-214ENST00000485842 LRRC1Q9BTT6 524 aa11.65□□□□□ -0.54
HPS4-214ENST00000485842 GRHL1Q9NZI5 618 aa11.65□□□□□ -0.54
HPS4-214ENST00000485842 WHRNQ9P202 907 aa11.65□□□□□ -0.54
HPS4-214ENST00000485842 PRSS21Q9Y6M0 314 aa11.65□□□□□ -0.54
HPS4-214ENST00000485842 BPTFQ12830 3046 aa11.65□□□□□ -0.55
HPS4-214ENST00000485842 PIKFYVEQ9Y2I7 2098 aa11.64□□□□□ -0.55
HPS4-214ENST00000485842 ZCWPW2A0A1B0GU75 182 aa11.64□□□□□ -0.55
HPS4-214ENST00000485842 ESYT3A0FGR9 886 aa11.64□□□□□ -0.55
HPS4-214ENST00000485842 MED19A0JLT2 244 aaPredicted RBP11.64□□□□□ -0.55
HPS4-214ENST00000485842 EME2A4GXA9 379 aaPredicted RBP11.64□□□□□ -0.55
HPS4-214ENST00000485842 MGAT4DA6NG13 374 aa11.64□□□□□ -0.55
HPS4-214ENST00000485842 TP73O15350 636 aa11.64□□□□□ -0.55
HPS4-214ENST00000485842 OR1I1O60431 355 aa11.64□□□□□ -0.55
HPS4-214ENST00000485842 NDUFS3O75489 264 aa11.64□□□□□ -0.55
HPS4-214ENST00000485842 USP1O94782 785 aa11.64□□□□□ -0.55
HPS4-214ENST00000485842 F3P13726 295 aa11.64□□□□□ -0.55
HPS4-214ENST00000485842 SLC2A4P14672 509 aa11.64□□□□□ -0.55
HPS4-214ENST00000485842 RPL10P27635 214 aaKnown RBP11.64□□□□□ -0.55
HPS4-214ENST00000485842 ARCN1P48444 511 aaKnown RBP11.64□□□□□ -0.55
HPS4-214ENST00000485842 TTPAP49638 278 aa11.64□□□□□ -0.55
HPS4-214ENST00000485842 CLCNKAP51800 687 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms