RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 PDE1BQ01064 536 aa12.69□□□□□ -0.38
HDAC1-209ENST00000484305 SNX1Q13596 522 aa12.69□□□□□ -0.38
HDAC1-209ENST00000484305 P3H1Q32P28 736 aa12.69□□□□□ -0.38
HDAC1-209ENST00000484305 TMEM71Q6P5X7 295 aa12.69□□□□□ -0.38
HDAC1-209ENST00000484305 TMEM220Q6QAJ8 160 aa12.69□□□□□ -0.38
HDAC1-209ENST00000484305 MICALCLQ6ZW33 695 aa12.69□□□□□ -0.38
HDAC1-209ENST00000484305 PRUNE1Q86TP1 453 aa12.69□□□□□ -0.38
HDAC1-209ENST00000484305 OR4D9Q8NGE8 314 aa12.69□□□□□ -0.38
HDAC1-209ENST00000484305 OR10G6Q8NH81 332 aa12.69□□□□□ -0.38
HDAC1-209ENST00000484305 NAT14Q8WUY8 206 aa12.69□□□□□ -0.38
HDAC1-209ENST00000484305 KCNE4Q8WWG9 221 aa12.69□□□□□ -0.38
HDAC1-209ENST00000484305 TMEM159Q96B96 161 aa12.69□□□□□ -0.38
HDAC1-209ENST00000484305 SH3KBP1Q96B97 665 aa12.69□□□□□ -0.38
HDAC1-209ENST00000484305 LRRC45Q96CN5 670 aa12.69□□□□□ -0.38
HDAC1-209ENST00000484305 AHCYL2Q96HN2 611 aaKnown RBP12.69□□□□□ -0.38
HDAC1-209ENST00000484305 ALS2CR12Q96Q35 445 aa12.69□□□□□ -0.38
HDAC1-209ENST00000484305 CMKLR1Q99788 373 aa12.69□□□□□ -0.38
HDAC1-209ENST00000484305 TLR10Q9BXR5 811 aa12.69□□□□□ -0.38
HDAC1-209ENST00000484305 FRMD8P1Q9BZ68 369 aaPredicted RBP12.69□□□□□ -0.38
HDAC1-209ENST00000484305 ZCCHC2Q9C0B9 1178 aaKnown RBP12.69□□□□□ -0.38
HDAC1-209ENST00000484305 ASB8Q9H765 288 aa12.69□□□□□ -0.38
HDAC1-209ENST00000484305 SMOXQ9NWM0 555 aa12.69□□□□□ -0.38
HDAC1-209ENST00000484305 PIH1D1Q9NWS0 290 aaKnown RBP12.69□□□□□ -0.38
HDAC1-209ENST00000484305 ZNF624Q9P2J8 865 aaPredicted RBP12.69□□□□□ -0.38
HDAC1-209ENST00000484305 FEZ2Q9UHY8 353 aaPredicted RBP12.69□□□□□ -0.38
HDAC1-209ENST00000484305 ZNF148Q9UQR1 794 aa12.69□□□□□ -0.38
HDAC1-209ENST00000484305 SSUH2Q9Y2M2 353 aa12.69□□□□□ -0.38
HDAC1-209ENST00000484305 PPP2R2CQ9Y2T4 447 aa12.69□□□□□ -0.38
HDAC1-209ENST00000484305 PRAMEF33A0A0G2JMD5 474 aa12.68□□□□□ -0.38
HDAC1-209ENST00000484305 AGAP14A8MT82 685 aa12.68□□□□□ -0.38
HDAC1-209ENST00000484305 PSMD3O43242 534 aa12.68□□□□□ -0.38
HDAC1-209ENST00000484305 POP7O75817 140 aaKnown RBP12.68□□□□□ -0.38
HDAC1-209ENST00000484305 IFNB1P01574 187 aa12.68□□□□□ -0.38
HDAC1-209ENST00000484305 CCL4P13236 92 aa12.68□□□□□ -0.38
HDAC1-209ENST00000484305 ETS1P14921 441 aa12.68□□□□□ -0.38
HDAC1-209ENST00000484305 IDSP22304 550 aa12.68□□□□□ -0.38
HDAC1-209ENST00000484305 AKT1P31749 480 aa12.68□□□□□ -0.38
HDAC1-209ENST00000484305 PPM1FP49593 454 aaPredicted RBP12.68□□□□□ -0.38
HDAC1-209ENST00000484305 SIX1Q15475 284 aaPredicted RBP12.68□□□□□ -0.38
HDAC1-209ENST00000484305 ABRAXAS1Q6UWZ7 409 aa12.68□□□□□ -0.38
HDAC1-209ENST00000484305 DET1Q7L5Y6 550 aa12.68□□□□□ -0.38
HDAC1-209ENST00000484305 AMZ2Q86W34 360 aa12.68□□□□□ -0.38
HDAC1-209ENST00000484305 JAMLQ86YT9 394 aa12.68□□□□□ -0.38
HDAC1-209ENST00000484305 BEND7Q8N7W2 519 aaPredicted RBP12.68□□□□□ -0.38
HDAC1-209ENST00000484305 GLIS1Q8NBF1 620 aa12.68□□□□□ -0.38
HDAC1-209ENST00000484305 SGF29Q96ES7 293 aa12.68□□□□□ -0.38
HDAC1-209ENST00000484305 CCDC97Q96F63 343 aaPredicted RBP12.68□□□□□ -0.38
HDAC1-209ENST00000484305 DNAJC1Q96KC8 554 aaKnown RBP12.68□□□□□ -0.38
HDAC1-209ENST00000484305 TBC1D10AQ9BXI6 508 aa12.68□□□□□ -0.38
HDAC1-209ENST00000484305 FAM96AQ9H5X1 160 aa12.68□□□□□ -0.38
HDAC1-209ENST00000484305 STN1Q9H668 368 aaKnown RBP12.68□□□□□ -0.38
HDAC1-209ENST00000484305 GRPEL1Q9HAV7 217 aa12.68□□□□□ -0.38
HDAC1-209ENST00000484305 WDR37Q9Y2I8 494 aa12.68□□□□□ -0.38
HDAC1-209ENST00000484305 PCDHGA7Q9Y5G6 932 aa12.68□□□□□ -0.38
HDAC1-209ENST00000484305 PIKFYVEQ9Y2I7 2098 aa12.68□□□□□ -0.38
HDAC1-209ENST00000484305 AHCTF1Q8WYP5 2266 aa12.67□□□□□ -0.38
HDAC1-209ENST00000484305 OR52A4PA6NMU1 304 aa12.67□□□□□ -0.38
HDAC1-209ENST00000484305 HGSO14964 777 aaPredicted RBP12.67□□□□□ -0.38
HDAC1-209ENST00000484305 KLK10O43240 276 aa12.67□□□□□ -0.38
HDAC1-209ENST00000484305 DUX1O43812 170 aa12.67□□□□□ -0.38
HDAC1-209ENST00000484305 PRAMEF10O60809 474 aa12.67□□□□□ -0.38
HDAC1-209ENST00000484305 THRAP10827 490 aa12.67□□□□□ -0.38
HDAC1-209ENST00000484305 VCLP18206 1134 aa12.67□□□□□ -0.38
HDAC1-209ENST00000484305 MSH3P20585 1137 aa12.67□□□□□ -0.38
HDAC1-209ENST00000484305 HADHAP40939 763 aa12.67□□□□□ -0.38
HDAC1-209ENST00000484305 MAPK9P45984 424 aa12.67□□□□□ -0.38
HDAC1-209ENST00000484305 CDKN1CP49918 316 aaPredicted RBP12.67□□□□□ -0.38
HDAC1-209ENST00000484305 MAPK10P53779 464 aa12.67□□□□□ -0.38
HDAC1-209ENST00000484305 EPHA4P54764 986 aa12.67□□□□□ -0.38
HDAC1-209ENST00000484305 DMPKQ09013 629 aa12.67□□□□□ -0.38
HDAC1-209ENST00000484305 TRA2AQ13595 282 aaKnown RBP eCLIP12.67□□□□□ -0.38
HDAC1-209ENST00000484305 SEPT6Q14141 434 aa12.67□□□□□ -0.38
HDAC1-209ENST00000484305 POU6F1Q14863 301 aa12.67□□□□□ -0.38
HDAC1-209ENST00000484305 CLCA4Q14CN2 919 aa12.67□□□□□ -0.38
HDAC1-209ENST00000484305 FNBP1LQ5T0N5 605 aa12.67□□□□□ -0.38
HDAC1-209ENST00000484305 AGAP9Q5VTM2 703 aa12.67□□□□□ -0.38
HDAC1-209ENST00000484305 WDR74Q6RFH5 385 aaPredicted RBP12.67□□□□□ -0.38
HDAC1-209ENST00000484305 WASH2PQ6VEQ5 465 aa12.67□□□□□ -0.38
HDAC1-209ENST00000484305 FAM83HQ6ZRV2 1179 aaPredicted RBP12.67□□□□□ -0.38
HDAC1-209ENST00000484305 TMEM26Q6ZUK4 368 aa12.67□□□□□ -0.38
HDAC1-209ENST00000484305 TRIM48Q8IWZ4 208 aa12.67□□□□□ -0.38
HDAC1-209ENST00000484305 AVL9Q8NBF6 648 aa12.67□□□□□ -0.38
HDAC1-209ENST00000484305 TRIM58Q8NG06 486 aa12.67□□□□□ -0.38
HDAC1-209ENST00000484305 OR52K1Q8NGK4 314 aa12.67□□□□□ -0.38
HDAC1-209ENST00000484305 NCSTNQ92542 709 aa12.67□□□□□ -0.38
HDAC1-209ENST00000484305 USP7Q93009 1102 aa12.67□□□□□ -0.38
HDAC1-209ENST00000484305 DPYSL5Q9BPU6 564 aa12.67□□□□□ -0.38
HDAC1-209ENST00000484305 C19orf43Q9BQ61 176 aa12.67□□□□□ -0.38
HDAC1-209ENST00000484305 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.67□□□□□ -0.38
HDAC1-209ENST00000484305 DPH1Q9BZG8 443 aa12.67□□□□□ -0.38
HDAC1-209ENST00000484305 ZMYND15Q9H091 742 aa12.67□□□□□ -0.38
HDAC1-209ENST00000484305 PRORYQ9H606 182 aa12.67□□□□□ -0.38
HDAC1-209ENST00000484305 ETNK1Q9HBU6 452 aa12.67□□□□□ -0.38
HDAC1-209ENST00000484305 WASH6PQ9NQA3 447 aa12.67□□□□□ -0.38
HDAC1-209ENST00000484305 PDP2Q9P2J9 529 aa12.67□□□□□ -0.38
HDAC1-209ENST00000484305 CRLS1Q9UJA2 301 aa12.67□□□□□ -0.38
HDAC1-209ENST00000484305 PSMD13Q9UNM6 376 aa12.67□□□□□ -0.38
HDAC1-209ENST00000484305 DNMT3AQ9Y6K1 912 aaPredicted RBP12.67□□□□□ -0.38
HDAC1-209ENST00000484305 SLC30A1Q9Y6M5 507 aa12.67□□□□□ -0.38
HDAC1-209ENST00000484305 SDK2Q58EX2 2172 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms