RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 KCNJ11Q14654 390 aa17.71■□□□□ 0.43
HDAC6-225ENST00000483506 PLA2G4EQ3MJ16 856 aa17.71■□□□□ 0.43
HDAC6-225ENST00000483506 CCDC38Q502W7 563 aa17.71■□□□□ 0.43
HDAC6-225ENST00000483506 TSTD2Q5T7W7 516 aa17.71■□□□□ 0.43
HDAC6-225ENST00000483506 ARMC3Q5W041 872 aa17.71■□□□□ 0.43
HDAC6-225ENST00000483506 TMEM220Q6QAJ8 160 aa17.71■□□□□ 0.43
HDAC6-225ENST00000483506 ZNF534Q76KX8 674 aa17.71■□□□□ 0.43
HDAC6-225ENST00000483506 GRK7Q8WTQ7 553 aa17.71■□□□□ 0.43
HDAC6-225ENST00000483506 SGSM3Q96HU1 749 aa17.71■□□□□ 0.43
HDAC6-225ENST00000483506 COPS8Q99627 209 aa17.71■□□□□ 0.43
HDAC6-225ENST00000483506 NAPGQ99747 312 aaPredicted RBP17.71■□□□□ 0.43
HDAC6-225ENST00000483506 PRDM8Q9NQV8 689 aa17.71■□□□□ 0.43
HDAC6-225ENST00000483506 TCAF1Q9Y4C2 921 aa17.71■□□□□ 0.43
HDAC6-225ENST00000483506 KMT2BQ9UMN6 2715 aaPredicted RBP17.71■□□□□ 0.43
HDAC6-225ENST00000483506 ACACAQ13085 2346 aa17.71■□□□□ 0.43
HDAC6-225ENST00000483506 OR2AG2A6NM03 316 aa17.7■□□□□ 0.42
HDAC6-225ENST00000483506 TMX2-CTNND1H3BSU7 103 aa17.7■□□□□ 0.42
HDAC6-225ENST00000483506 FANCGO15287 622 aa17.7■□□□□ 0.42
HDAC6-225ENST00000483506 POP7O75817 140 aaKnown RBP17.7■□□□□ 0.42
HDAC6-225ENST00000483506 RALBP11234 206 aa17.7■□□□□ 0.42
HDAC6-225ENST00000483506 XRCC1P18887 633 aaPredicted RBP17.7■□□□□ 0.42
HDAC6-225ENST00000483506 CCKBRP32239 447 aa17.7■□□□□ 0.42
HDAC6-225ENST00000483506 FOXN2P32314 431 aa17.7■□□□□ 0.42
HDAC6-225ENST00000483506 PRLHRP49683 370 aa17.7■□□□□ 0.42
HDAC6-225ENST00000483506 GPS1Q13098 491 aa17.7■□□□□ 0.42
HDAC6-225ENST00000483506 PCID2Q5JVF3 399 aa17.7■□□□□ 0.42
HDAC6-225ENST00000483506 LRRC8BQ6P9F7 803 aa17.7■□□□□ 0.42
HDAC6-225ENST00000483506 SLC9B2Q86UD5 537 aa17.7■□□□□ 0.42
HDAC6-225ENST00000483506 AMZ2Q86W34 360 aa17.7■□□□□ 0.42
HDAC6-225ENST00000483506 SERPINA9Q86WD7 417 aa17.7■□□□□ 0.42
HDAC6-225ENST00000483506 CREG2Q8IUH2 290 aa17.7■□□□□ 0.42
HDAC6-225ENST00000483506 PIANPQ8IYJ0 282 aa17.7■□□□□ 0.42
HDAC6-225ENST00000483506 Q8N9G6 341 aaPredicted RBP17.7■□□□□ 0.42
HDAC6-225ENST00000483506 ZCCHC14Q8WYQ9 949 aaKnown RBP17.7■□□□□ 0.42
HDAC6-225ENST00000483506 SLCO2A1Q92959 643 aa17.7■□□□□ 0.42
HDAC6-225ENST00000483506 IL22Q9GZX6 179 aa17.7■□□□□ 0.42
HDAC6-225ENST00000483506 OSGEPL1Q9H4B0 414 aa17.7■□□□□ 0.42
HDAC6-225ENST00000483506 CCDC86Q9H6F5 360 aaKnown RBP17.7■□□□□ 0.42
HDAC6-225ENST00000483506 UCK1Q9HA47 277 aa17.7■□□□□ 0.42
HDAC6-225ENST00000483506 ZDHHC3Q9NYG2 299 aa17.7■□□□□ 0.42
HDAC6-225ENST00000483506 DNAJC16Q9Y2G8 782 aa17.7■□□□□ 0.42
HDAC6-225ENST00000483506 ZZEF1O43149 2961 aa17.7■□□□□ 0.42
HDAC6-225ENST00000483506 TCRBV7S3A2A0A539 114 aa17.69■□□□□ 0.42
HDAC6-225ENST00000483506 CTAGE9A4FU28 777 aa17.69■□□□□ 0.42
HDAC6-225ENST00000483506 CFAP99D6REC4 459 aa17.69■□□□□ 0.42
HDAC6-225ENST00000483506 SNX2O60749 519 aa17.69■□□□□ 0.42
HDAC6-225ENST00000483506 ATP1B2P14415 290 aaPredicted RBP17.69■□□□□ 0.42
HDAC6-225ENST00000483506 BRAFP15056 766 aa17.69■□□□□ 0.42
HDAC6-225ENST00000483506 IDSP22304 550 aa17.69■□□□□ 0.42
HDAC6-225ENST00000483506 NPY2RP49146 381 aa17.69■□□□□ 0.42
HDAC6-225ENST00000483506 CDKN1CP49918 316 aaPredicted RBP17.69■□□□□ 0.42
HDAC6-225ENST00000483506 OR1D5P58170 312 aa17.69■□□□□ 0.42
HDAC6-225ENST00000483506 HHEXQ03014 270 aa17.69■□□□□ 0.42
HDAC6-225ENST00000483506 ZFP36L1Q07352 338 aaKnown RBP17.69■□□□□ 0.42
HDAC6-225ENST00000483506 BIRC2Q13490 618 aa17.69■□□□□ 0.42
HDAC6-225ENST00000483506 TRIP13Q15645 432 aaPredicted RBP17.69■□□□□ 0.42
HDAC6-225ENST00000483506 ZRANB3Q5FWF4 1079 aa17.69■□□□□ 0.42
HDAC6-225ENST00000483506 FNBP1LQ5T0N5 605 aa17.69■□□□□ 0.42
HDAC6-225ENST00000483506 IGF2-ASQ6U949 168 aa17.69■□□□□ 0.42
HDAC6-225ENST00000483506 AFTPHQ6ULP2 937 aa17.69■□□□□ 0.42
HDAC6-225ENST00000483506 XKR5Q6UX68 686 aa17.69■□□□□ 0.42
HDAC6-225ENST00000483506 PACS1Q6VY07 963 aa17.69■□□□□ 0.42
HDAC6-225ENST00000483506 PPHLN1Q8NEY8 458 aaKnown RBP17.69■□□□□ 0.42
HDAC6-225ENST00000483506 OR2L2Q8NH16 312 aa17.69■□□□□ 0.42
HDAC6-225ENST00000483506 SH3KBP1Q96B97 665 aa17.69■□□□□ 0.42
HDAC6-225ENST00000483506 SGF29Q96ES7 293 aa17.69■□□□□ 0.42
HDAC6-225ENST00000483506 CCDC97Q96F63 343 aaPredicted RBP17.69■□□□□ 0.42
HDAC6-225ENST00000483506 DCUN1D1Q96GG9 259 aa17.69■□□□□ 0.42
HDAC6-225ENST00000483506 LIN37Q96GY3 246 aaPredicted RBP17.69■□□□□ 0.42
HDAC6-225ENST00000483506 ZNF778Q96MU6 729 aa17.69■□□□□ 0.42
HDAC6-225ENST00000483506 FAM96AQ9H5X1 160 aa17.69■□□□□ 0.42
HDAC6-225ENST00000483506 STN1Q9H668 368 aaKnown RBP17.69■□□□□ 0.42
HDAC6-225ENST00000483506 MRM3Q9HC36 420 aaKnown RBP17.69■□□□□ 0.42
HDAC6-225ENST00000483506 SCHIP1Q9P0W5 487 aaPredicted RBP17.69■□□□□ 0.42
HDAC6-225ENST00000483506 CPNE7Q9UBL6 633 aa17.69■□□□□ 0.42
HDAC6-225ENST00000483506 SLC2A6Q9UGQ3 507 aa17.69■□□□□ 0.42
HDAC6-225ENST00000483506 PCYOX1Q9UHG3 505 aa17.69■□□□□ 0.42
HDAC6-225ENST00000483506 SAR1BQ9Y6B6 198 aa17.69■□□□□ 0.42
HDAC6-225ENST00000483506 IGHV1OR21-1A0A087WYE8 117 aa17.68■□□□□ 0.42
HDAC6-225ENST00000483506 CCDC162PA2VCL2 907 aa17.68■□□□□ 0.42
HDAC6-225ENST00000483506 MGAT4DA6NG13 374 aa17.68■□□□□ 0.42
HDAC6-225ENST00000483506 DXOO77932 396 aaKnown RBP17.68■□□□□ 0.42
HDAC6-225ENST00000483506 CPNE6O95741 557 aa17.68■□□□□ 0.42
HDAC6-225ENST00000483506 CD1CP29017 333 aa17.68■□□□□ 0.42
HDAC6-225ENST00000483506 ALDH4A1P30038 563 aa17.68■□□□□ 0.42
HDAC6-225ENST00000483506 LSSP48449 732 aa17.68■□□□□ 0.42
HDAC6-225ENST00000483506 EPHA4P54764 986 aa17.68■□□□□ 0.42
HDAC6-225ENST00000483506 GPLD1P80108 840 aa17.68■□□□□ 0.42
HDAC6-225ENST00000483506 ITIH4Q14624 930 aa17.68■□□□□ 0.42
HDAC6-225ENST00000483506 DBN1Q16643 649 aa17.68■□□□□ 0.42
HDAC6-225ENST00000483506 FAM83HQ6ZRV2 1179 aaPredicted RBP17.68■□□□□ 0.42
HDAC6-225ENST00000483506 MICALCLQ6ZW33 695 aa17.68■□□□□ 0.42
HDAC6-225ENST00000483506 B3GNT8Q7Z7M8 397 aa17.68■□□□□ 0.42
HDAC6-225ENST00000483506 PROSER1Q86XN7 944 aa17.68■□□□□ 0.42
HDAC6-225ENST00000483506 SLITRK4Q8IW52 837 aa17.68■□□□□ 0.42
HDAC6-225ENST00000483506 MDM1Q8TC05 714 aa17.68■□□□□ 0.42
HDAC6-225ENST00000483506 CPT1BQ92523 772 aa17.68■□□□□ 0.42
HDAC6-225ENST00000483506 HDAC10Q969S8 669 aa17.68■□□□□ 0.42
HDAC6-225ENST00000483506 ATXN7L3BQ96GX2 97 aa17.68■□□□□ 0.42
HDAC6-225ENST00000483506 TMEM74Q96NL1 305 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms