RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 SYT10Q6XYQ8 523 aa13.18□□□□□ -0.3
SSR1-208ENST00000483409 RBM44Q6ZP01 1051 aaKnown RBP13.18□□□□□ -0.3
SSR1-208ENST00000483409 SPRED1Q7Z699 444 aa13.18□□□□□ -0.3
SSR1-208ENST00000483409 AMZ2Q86W34 360 aa13.18□□□□□ -0.3
SSR1-208ENST00000483409 ZNF761Q86XN6 746 aaPredicted RBP13.18□□□□□ -0.3
SSR1-208ENST00000483409 KLHL7Q8IXQ5 586 aa13.18□□□□□ -0.3
SSR1-208ENST00000483409 SFRP1Q8N474 314 aa13.18□□□□□ -0.3
SSR1-208ENST00000483409 COPS8Q99627 209 aa13.18□□□□□ -0.3
SSR1-208ENST00000483409 TMEM121BQ9BXQ6 578 aaPredicted RBP13.18□□□□□ -0.3
SSR1-208ENST00000483409 LRRN3Q9H3W5 708 aa13.18□□□□□ -0.3
SSR1-208ENST00000483409 CHRAC1Q9NRG0 131 aa13.18□□□□□ -0.3
SSR1-208ENST00000483409 SYBUQ9NX95 663 aa13.18□□□□□ -0.3
SSR1-208ENST00000483409 ZDHHC3Q9NYG2 299 aa13.18□□□□□ -0.3
SSR1-208ENST00000483409 FAM8A1Q9UBU6 413 aa13.18□□□□□ -0.3
SSR1-208ENST00000483409 ASIC3Q9UHC3 531 aa13.18□□□□□ -0.3
SSR1-208ENST00000483409 RIMKLBQ9ULI2 386 aa13.18□□□□□ -0.3
SSR1-208ENST00000483409 WDFY3Q8IZQ1 3526 aa13.18□□□□□ -0.3
SSR1-208ENST00000483409 ASPMQ8IZT6 3477 aa13.18□□□□□ -0.3
SSR1-208ENST00000483409 ACACBO00763 2458 aa13.17□□□□□ -0.3
SSR1-208ENST00000483409 A0A1W2PQM1 296 aa13.17□□□□□ -0.3
SSR1-208ENST00000483409 PRR19A6NJB7 356 aa13.17□□□□□ -0.3
SSR1-208ENST00000483409 CFAP99D6REC4 459 aa13.17□□□□□ -0.3
SSR1-208ENST00000483409 AP3B1O00203 1094 aa13.17□□□□□ -0.3
SSR1-208ENST00000483409 NTN3O00634 580 aaPredicted RBP13.17□□□□□ -0.3
SSR1-208ENST00000483409 SGTAO43765 313 aa13.17□□□□□ -0.3
SSR1-208ENST00000483409 AVILO75366 819 aa13.17□□□□□ -0.3
SSR1-208ENST00000483409 GOT2P00505 430 aaKnown RBP13.17□□□□□ -0.3
SSR1-208ENST00000483409 SLC2A4P14672 509 aa13.17□□□□□ -0.3
SSR1-208ENST00000483409 PNLIPP16233 465 aa13.17□□□□□ -0.3
SSR1-208ENST00000483409 RPL10P27635 214 aaKnown RBP13.17□□□□□ -0.3
SSR1-208ENST00000483409 PAFAH1B1P43034 410 aa13.17□□□□□ -0.3
SSR1-208ENST00000483409 PTGIRP43119 386 aa13.17□□□□□ -0.3
SSR1-208ENST00000483409 NPY2RP49146 381 aa13.17□□□□□ -0.3
SSR1-208ENST00000483409 DRG2P55039 364 aaKnown RBP13.17□□□□□ -0.3
SSR1-208ENST00000483409 ETF1P62495 437 aaKnown RBP13.17□□□□□ -0.3
SSR1-208ENST00000483409 PRAMEP78395 509 aa13.17□□□□□ -0.3
SSR1-208ENST00000483409 SARNPP82979 210 aaKnown RBP13.17□□□□□ -0.3
SSR1-208ENST00000483409 HHEXQ03014 270 aa13.17□□□□□ -0.3
SSR1-208ENST00000483409 CAMK2BQ13554 666 aa13.17□□□□□ -0.3
SSR1-208ENST00000483409 NFE2L1Q14494 772 aa13.17□□□□□ -0.3
SSR1-208ENST00000483409 DBN1Q16643 649 aa13.17□□□□□ -0.3
SSR1-208ENST00000483409 AMZ1Q400G9 498 aa13.17□□□□□ -0.3
SSR1-208ENST00000483409 IYDQ6PHW0 289 aa13.17□□□□□ -0.3
SSR1-208ENST00000483409 FAM83HQ6ZRV2 1179 aaPredicted RBP13.17□□□□□ -0.3
SSR1-208ENST00000483409 NLRP9Q7RTR0 991 aa13.17□□□□□ -0.3
SSR1-208ENST00000483409 ZNF438Q7Z4V0 828 aa13.17□□□□□ -0.3
SSR1-208ENST00000483409 MPP5Q8N3R9 675 aa13.17□□□□□ -0.3
SSR1-208ENST00000483409 OR6P1Q8NGX9 317 aa13.17□□□□□ -0.3
SSR1-208ENST00000483409 WDR48Q8TAF3 677 aa13.17□□□□□ -0.3
SSR1-208ENST00000483409 ZNF514Q96K75 400 aaPredicted RBP13.17□□□□□ -0.3
SSR1-208ENST00000483409 GFM1Q96RP9 751 aaKnown RBP13.17□□□□□ -0.3
SSR1-208ENST00000483409 SCHIP1Q9P0W5 487 aaPredicted RBP13.17□□□□□ -0.3
SSR1-208ENST00000483409 PCYOX1Q9UHG3 505 aa13.17□□□□□ -0.3
SSR1-208ENST00000483409 ATXN7L1Q9ULK2 861 aaPredicted RBP13.17□□□□□ -0.3
SSR1-208ENST00000483409 PCDHB1Q9Y5F3 818 aa13.17□□□□□ -0.3
SSR1-208ENST00000483409 MAP1BP46821 2468 aaKnown RBP13.17□□□□□ -0.3
SSR1-208ENST00000483409 IGLV3-16A0A075B6K0 115 aa13.16□□□□□ -0.3
SSR1-208ENST00000483409 KIR2DS5A0A0G2JLQ3 304 aa13.16□□□□□ -0.3
SSR1-208ENST00000483409 A0A0G2JNG1 304 aa13.16□□□□□ -0.3
SSR1-208ENST00000483409 TRABD2BA6NFA1 517 aa13.16□□□□□ -0.3
SSR1-208ENST00000483409 D6RAR5 112 aa13.16□□□□□ -0.3
SSR1-208ENST00000483409 KIR2DS3K7RE56 304 aa13.16□□□□□ -0.3
SSR1-208ENST00000483409 B4GAT1O43505 415 aa13.16□□□□□ -0.3
SSR1-208ENST00000483409 TCEA3O75764 348 aa13.16□□□□□ -0.3
SSR1-208ENST00000483409 ATP1B2P14415 290 aaPredicted RBP13.16□□□□□ -0.3
SSR1-208ENST00000483409 IDSP22304 550 aa13.16□□□□□ -0.3
SSR1-208ENST00000483409 NMBRP28336 390 aa13.16□□□□□ -0.3
SSR1-208ENST00000483409 FASLGP48023 281 aa13.16□□□□□ -0.3
SSR1-208ENST00000483409 PDX1P52945 283 aa13.16□□□□□ -0.3
SSR1-208ENST00000483409 ACVR1Q04771 509 aa13.16□□□□□ -0.3
SSR1-208ENST00000483409 PTK6Q13882 451 aa13.16□□□□□ -0.3
SSR1-208ENST00000483409 KIR2DS5Q14953 304 aa13.16□□□□□ -0.3
SSR1-208ENST00000483409 NR1D2Q14995 579 aa13.16□□□□□ -0.3
SSR1-208ENST00000483409 BCL7AQ4VC05 210 aa13.16□□□□□ -0.3
SSR1-208ENST00000483409 CASC4Q6P4E1 433 aa13.16□□□□□ -0.3
SSR1-208ENST00000483409 CES3Q6UWW8 571 aa13.16□□□□□ -0.3
SSR1-208ENST00000483409 CAND1Q86VP6 1230 aaKnown RBP13.16□□□□□ -0.3
SSR1-208ENST00000483409 CACTIN-AS1Q8N1I8 211 aa13.16□□□□□ -0.3
SSR1-208ENST00000483409 HEXDCQ8WVB3 486 aa13.16□□□□□ -0.3
SSR1-208ENST00000483409 SLCO2A1Q92959 643 aa13.16□□□□□ -0.3
SSR1-208ENST00000483409 PEX13Q92968 403 aa13.16□□□□□ -0.3
SSR1-208ENST00000483409 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.16□□□□□ -0.3
SSR1-208ENST00000483409 C16orf45Q96MC5 204 aaPredicted RBP13.16□□□□□ -0.3
SSR1-208ENST00000483409 SLC38A3Q99624 504 aa13.16□□□□□ -0.3
SSR1-208ENST00000483409 FOXP3Q9BZS1 431 aa13.16□□□□□ -0.3
SSR1-208ENST00000483409 STN1Q9H668 368 aaKnown RBP13.16□□□□□ -0.3
SSR1-208ENST00000483409 SARS2Q9NP81 518 aaKnown RBP13.16□□□□□ -0.3
SSR1-208ENST00000483409 DNMT3AQ9Y6K1 912 aaPredicted RBP13.16□□□□□ -0.3
SSR1-208ENST00000483409 OR5K4A6NMS3 321 aa13.15□□□□□ -0.3
SSR1-208ENST00000483409 OR52A4PA6NMU1 304 aa13.15□□□□□ -0.3
SSR1-208ENST00000483409 KCNJ13O60928 360 aa13.15□□□□□ -0.3
SSR1-208ENST00000483409 BRAFP15056 766 aa13.15□□□□□ -0.3
SSR1-208ENST00000483409 GPR3P46089 330 aa13.15□□□□□ -0.3
SSR1-208ENST00000483409 PPM1FP49593 454 aaPredicted RBP13.15□□□□□ -0.3
SSR1-208ENST00000483409 PRLHRP49683 370 aa13.15□□□□□ -0.3
SSR1-208ENST00000483409 DMPKQ09013 629 aa13.15□□□□□ -0.3
SSR1-208ENST00000483409 ISXQ2M1V0 245 aa13.15□□□□□ -0.3
SSR1-208ENST00000483409 MAP9Q49MG5 647 aa13.15□□□□□ -0.3
SSR1-208ENST00000483409 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.15□□□□□ -0.3
SSR1-208ENST00000483409 RNASEH2BQ5TBB1 312 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms