RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 ZNF148Q9UQR1 794 aa13.67□□□□□ -0.22
VARS-225ENST00000482996 KCTD3Q9Y597 815 aa13.67□□□□□ -0.22
VARS-225ENST00000482996 PCDHGA7Q9Y5G6 932 aa13.67□□□□□ -0.22
VARS-225ENST00000482996 IGHV5-10-1A0A0J9YXX1 117 aa13.66□□□□□ -0.22
VARS-225ENST00000482996 ERI2A8K979 691 aaKnown RBP13.66□□□□□ -0.22
VARS-225ENST00000482996 GPR39O43194 453 aa13.66□□□□□ -0.22
VARS-225ENST00000482996 SRP72O76094 671 aaKnown RBP13.66□□□□□ -0.22
VARS-225ENST00000482996 AP2A1O95782 977 aa13.66□□□□□ -0.22
VARS-225ENST00000482996 VIPP01282 170 aa13.66□□□□□ -0.22
VARS-225ENST00000482996 IFNB1P01574 187 aa13.66□□□□□ -0.22
VARS-225ENST00000482996 ITGALP20701 1170 aa13.66□□□□□ -0.22
VARS-225ENST00000482996 ZNF140P52738 457 aaPredicted RBP13.66□□□□□ -0.22
VARS-225ENST00000482996 LIMK2P53671 638 aa13.66□□□□□ -0.22
VARS-225ENST00000482996 UCNP55089 124 aa13.66□□□□□ -0.22
VARS-225ENST00000482996 CCZ1BP86790 482 aa13.66□□□□□ -0.22
VARS-225ENST00000482996 CCZ1P86791 482 aaPredicted RBP13.66□□□□□ -0.22
VARS-225ENST00000482996 TLE3Q04726 772 aa13.66□□□□□ -0.22
VARS-225ENST00000482996 OASLQ15646 514 aaKnown RBP13.66□□□□□ -0.22
VARS-225ENST00000482996 SEPT7Q16181 437 aaKnown RBP13.66□□□□□ -0.22
VARS-225ENST00000482996 AGAP9Q5VTM2 703 aa13.66□□□□□ -0.22
VARS-225ENST00000482996 TMEM71Q6P5X7 295 aa13.66□□□□□ -0.22
VARS-225ENST00000482996 TMEM220Q6QAJ8 160 aa13.66□□□□□ -0.22
VARS-225ENST00000482996 WASH2PQ6VEQ5 465 aa13.66□□□□□ -0.22
VARS-225ENST00000482996 LINC00523Q86TU6 105 aa13.66□□□□□ -0.22
VARS-225ENST00000482996 RASGEF1AQ8N9B8 481 aa13.66□□□□□ -0.22
VARS-225ENST00000482996 MAIP1Q8WWC4 291 aa13.66□□□□□ -0.22
VARS-225ENST00000482996 C1orf54Q8WWF1 131 aa13.66□□□□□ -0.22
VARS-225ENST00000482996 ULK4Q96C45 1275 aa13.66□□□□□ -0.22
VARS-225ENST00000482996 CCDC74BQ96LY2 380 aa13.66□□□□□ -0.22
VARS-225ENST00000482996 WASH6PQ9NQA3 447 aa13.66□□□□□ -0.22
VARS-225ENST00000482996 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.66□□□□□ -0.22
VARS-225ENST00000482996 CRLS1Q9UJA2 301 aa13.66□□□□□ -0.22
VARS-225ENST00000482996 DNMT3AQ9Y6K1 912 aaPredicted RBP13.66□□□□□ -0.22
VARS-225ENST00000482996 LILRA5A6NI73 299 aa13.65□□□□□ -0.22
VARS-225ENST00000482996 PRR19A6NJB7 356 aa13.65□□□□□ -0.22
VARS-225ENST00000482996 AGRPO00253 132 aa13.65□□□□□ -0.22
VARS-225ENST00000482996 NVLO15381 856 aaKnown RBP13.65□□□□□ -0.22
VARS-225ENST00000482996 KLK10O43240 276 aa13.65□□□□□ -0.22
VARS-225ENST00000482996 POP7O75817 140 aaKnown RBP13.65□□□□□ -0.22
VARS-225ENST00000482996 GAS8O95995 478 aa13.65□□□□□ -0.22
VARS-225ENST00000482996 RALBP11234 206 aa13.65□□□□□ -0.22
VARS-225ENST00000482996 HOXB3P14651 431 aaPredicted RBP13.65□□□□□ -0.22
VARS-225ENST00000482996 XRCC1P18887 633 aaPredicted RBP13.65□□□□□ -0.22
VARS-225ENST00000482996 SLC5A2P31639 672 aa13.65□□□□□ -0.22
VARS-225ENST00000482996 CSF2RBP32927 897 aa13.65□□□□□ -0.22
VARS-225ENST00000482996 CSTF2P33240 577 aaKnown RBP eCLIP13.65□□□□□ -0.22
VARS-225ENST00000482996 FDFT1P37268 417 aa13.65□□□□□ -0.22
VARS-225ENST00000482996 HALP42357 657 aa13.65□□□□□ -0.22
VARS-225ENST00000482996 MAPK9P45984 424 aa13.65□□□□□ -0.22
VARS-225ENST00000482996 LMAN1P49257 510 aa13.65□□□□□ -0.22
VARS-225ENST00000482996 CTSCP53634 463 aa13.65□□□□□ -0.22
VARS-225ENST00000482996 MAPK10P53779 464 aa13.65□□□□□ -0.22
VARS-225ENST00000482996 UBE2IP63279 158 aaKnown RBP13.65□□□□□ -0.22
VARS-225ENST00000482996 TMPRSS15P98073 1019 aa13.65□□□□□ -0.22
VARS-225ENST00000482996 MSLNQ13421 630 aaPredicted RBP13.65□□□□□ -0.22
VARS-225ENST00000482996 SEPT6Q14141 434 aa13.65□□□□□ -0.22
VARS-225ENST00000482996 C16orf72Q14CZ0 275 aa13.65□□□□□ -0.22
VARS-225ENST00000482996 TMEM164Q5U3C3 297 aa13.65□□□□□ -0.22
VARS-225ENST00000482996 ABRAXAS1Q6UWZ7 409 aa13.65□□□□□ -0.22
VARS-225ENST00000482996 ZNF574Q6ZN55 896 aaPredicted RBP13.65□□□□□ -0.22
VARS-225ENST00000482996 C11orf96Q7Z7L8 435 aa13.65□□□□□ -0.22
VARS-225ENST00000482996 TAB3Q8N5C8 712 aaPredicted RBP13.65□□□□□ -0.22
VARS-225ENST00000482996 CCDC89Q8N998 374 aa13.65□□□□□ -0.22
VARS-225ENST00000482996 AGBL5Q8NDL9 886 aa13.65□□□□□ -0.22
VARS-225ENST00000482996 OR13C4Q8NGS5 318 aa13.65□□□□□ -0.22
VARS-225ENST00000482996 NCSTNQ92542 709 aa13.65□□□□□ -0.22
VARS-225ENST00000482996 CXorf40BQ96DE9 158 aa13.65□□□□□ -0.22
VARS-225ENST00000482996 DCUN1D1Q96GG9 259 aa13.65□□□□□ -0.22
VARS-225ENST00000482996 UCK1Q9HA47 277 aa13.65□□□□□ -0.22
VARS-225ENST00000482996 RALYQ9UKM9 306 aaKnown RBP13.65□□□□□ -0.22
VARS-225ENST00000482996 PPP2R2CQ9Y2T4 447 aa13.65□□□□□ -0.22
VARS-225ENST00000482996 SLC30A1Q9Y6M5 507 aa13.65□□□□□ -0.22
VARS-225ENST00000482996 IGSF10Q6WRI0 2623 aa13.64□□□□□ -0.23
VARS-225ENST00000482996 KLHL33A6NCF5 533 aa13.64□□□□□ -0.23
VARS-225ENST00000482996 OR2AG2A6NM03 316 aa13.64□□□□□ -0.23
VARS-225ENST00000482996 CFAP99D6REC4 459 aa13.64□□□□□ -0.23
VARS-225ENST00000482996 E7EVH7 732 aa13.64□□□□□ -0.23
VARS-225ENST00000482996 LDB2O43679 373 aa13.64□□□□□ -0.23
VARS-225ENST00000482996 THRAP10827 490 aa13.64□□□□□ -0.23
VARS-225ENST00000482996 TPH1P17752 444 aa13.64□□□□□ -0.23
VARS-225ENST00000482996 ITIH1P19827 911 aa13.64□□□□□ -0.23
VARS-225ENST00000482996 RPL10P27635 214 aaKnown RBP13.64□□□□□ -0.23
VARS-225ENST00000482996 CA5AP35218 305 aa13.64□□□□□ -0.23
VARS-225ENST00000482996 SLC19A1P41440 591 aa13.64□□□□□ -0.23
VARS-225ENST00000482996 XIAPP98170 497 aa13.64□□□□□ -0.23
VARS-225ENST00000482996 CFHR1Q03591 330 aa13.64□□□□□ -0.23
VARS-225ENST00000482996 DMPKQ09013 629 aa13.64□□□□□ -0.23
VARS-225ENST00000482996 SNX1Q13596 522 aa13.64□□□□□ -0.23
VARS-225ENST00000482996 POU6F1Q14863 301 aa13.64□□□□□ -0.23
VARS-225ENST00000482996 GPR33Q49SQ1 333 aa13.64□□□□□ -0.23
VARS-225ENST00000482996 FNBP1LQ5T0N5 605 aa13.64□□□□□ -0.23
VARS-225ENST00000482996 WDR74Q6RFH5 385 aaPredicted RBP13.64□□□□□ -0.23
VARS-225ENST00000482996 TMEM26Q6ZUK4 368 aa13.64□□□□□ -0.23
VARS-225ENST00000482996 SNX20Q7Z614 316 aa13.64□□□□□ -0.23
VARS-225ENST00000482996 RBM12BQ8IXT5 1001 aaKnown RBP13.64□□□□□ -0.23
VARS-225ENST00000482996 RCBTB1Q8NDN9 531 aa13.64□□□□□ -0.23
VARS-225ENST00000482996 STYXQ8WUJ0 223 aa13.64□□□□□ -0.23
VARS-225ENST00000482996 HEXDCQ8WVB3 486 aa13.64□□□□□ -0.23
VARS-225ENST00000482996 DNAJC1Q96KC8 554 aaKnown RBP13.64□□□□□ -0.23
VARS-225ENST00000482996 TBC1D10AQ9BXI6 508 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms