RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 RPRMLQ8N4K4 120 aa6.32□□□□□ -1.4
CHD6-209ENST00000482596 SIDT2Q8NBJ9 832 aaKnown RBP6.32□□□□□ -1.4
CHD6-209ENST00000482596 WFDC12Q8WWY7 111 aa6.32□□□□□ -1.4
CHD6-209ENST00000482596 ZSCAN31Q96LW9 406 aaPredicted RBP6.32□□□□□ -1.4
CHD6-209ENST00000482596 IP6K3Q96PC2 410 aa6.32□□□□□ -1.4
CHD6-209ENST00000482596 MAP3K3Q99759 626 aa6.32□□□□□ -1.4
CHD6-209ENST00000482596 PRMT1Q99873 361 aaKnown RBP6.32□□□□□ -1.4
CHD6-209ENST00000482596 LACRTQ9GZZ8 138 aa6.32□□□□□ -1.4
CHD6-209ENST00000482596 SRA1Q9HD15 236 aaKnown RBP6.32□□□□□ -1.4
CHD6-209ENST00000482596 SLC6A20Q9NP91 592 aa6.32□□□□□ -1.4
CHD6-209ENST00000482596 LIMCH1Q9UPQ0 1083 aa6.32□□□□□ -1.4
CHD6-209ENST00000482596 PHF3Q92576 2039 aaKnown RBP6.32□□□□□ -1.4
CHD6-209ENST00000482596 TRAV17A0A0B4J275 112 aa6.31□□□□□ -1.4
CHD6-209ENST00000482596 IGHV5-51A0A0C4DH38 117 aa6.31□□□□□ -1.4
CHD6-209ENST00000482596 ZNF233A6NK53 670 aa6.31□□□□□ -1.4
CHD6-209ENST00000482596 FAM227AF5H4B4 570 aa6.31□□□□□ -1.4
CHD6-209ENST00000482596 F5H5T6 163 aa6.31□□□□□ -1.4
CHD6-209ENST00000482596 IFRD1O00458 451 aaPredicted RBP6.31□□□□□ -1.4
CHD6-209ENST00000482596 PPP1R12AO14974 1030 aaPredicted RBP6.31□□□□□ -1.4
CHD6-209ENST00000482596 TOX3O15405 576 aaPredicted RBP6.31□□□□□ -1.4
CHD6-209ENST00000482596 TLX2O43763 284 aaPredicted RBP6.31□□□□□ -1.4
CHD6-209ENST00000482596 CD5LO43866 347 aa6.31□□□□□ -1.4
CHD6-209ENST00000482596 IGHEP01854 428 aa6.31□□□□□ -1.4
CHD6-209ENST00000482596 FDPSP14324 419 aaKnown RBP6.31□□□□□ -1.4
CHD6-209ENST00000482596 IL4RP24394 825 aa6.31□□□□□ -1.4
CHD6-209ENST00000482596 MAPK1P28482 360 aa6.31□□□□□ -1.4
CHD6-209ENST00000482596 TRIM23P36406 574 aa6.31□□□□□ -1.4
CHD6-209ENST00000482596 GSDMDP57764 484 aa6.31□□□□□ -1.4
CHD6-209ENST00000482596 PPP1CAP62136 330 aa6.31□□□□□ -1.4
CHD6-209ENST00000482596 ARG2P78540 354 aa6.31□□□□□ -1.4
CHD6-209ENST00000482596 MFAP5Q13361 173 aa6.31□□□□□ -1.4
CHD6-209ENST00000482596 CAPRIN1Q14444 709 aaKnown RBP6.31□□□□□ -1.4
CHD6-209ENST00000482596 SURF1Q15526 300 aa6.31□□□□□ -1.4
CHD6-209ENST00000482596 GPR19Q15760 415 aa6.31□□□□□ -1.4
CHD6-209ENST00000482596 GLIPR1L2Q4G1C9 344 aa6.31□□□□□ -1.4
CHD6-209ENST00000482596 FILIP1LQ4L180 1135 aa6.31□□□□□ -1.4
CHD6-209ENST00000482596 PRR31Q5SQ13 230 aa6.31□□□□□ -1.4
CHD6-209ENST00000482596 CATSPEREQ5SY80 951 aa6.31□□□□□ -1.4
CHD6-209ENST00000482596 HYIQ5T013 277 aa6.31□□□□□ -1.4
CHD6-209ENST00000482596 ISLR2Q6UXK2 745 aa6.31□□□□□ -1.4
CHD6-209ENST00000482596 PRSS42Q7Z5A4 293 aa6.31□□□□□ -1.4
CHD6-209ENST00000482596 FGD2Q7Z6J4 655 aa6.31□□□□□ -1.4
CHD6-209ENST00000482596 UNC93AQ86WB7 457 aa6.31□□□□□ -1.4
CHD6-209ENST00000482596 SYTL1Q8IYJ3 562 aa6.31□□□□□ -1.4
CHD6-209ENST00000482596 RYBPQ8N488 228 aaPredicted RBP6.31□□□□□ -1.4
CHD6-209ENST00000482596 THAP3Q8WTV1 239 aaPredicted RBP6.31□□□□□ -1.4
CHD6-209ENST00000482596 ZNF514Q96K75 400 aaPredicted RBP6.31□□□□□ -1.4
CHD6-209ENST00000482596 GPR137Q96N19 417 aa6.31□□□□□ -1.4
CHD6-209ENST00000482596 LLPHQ9BRT6 129 aaKnown RBP6.31□□□□□ -1.4
CHD6-209ENST00000482596 ACBD3Q9H3P7 528 aa6.31□□□□□ -1.4
CHD6-209ENST00000482596 L2HGDHQ9H9P8 463 aa6.31□□□□□ -1.4
CHD6-209ENST00000482596 BRMS1Q9HCU9 246 aa6.31□□□□□ -1.4
CHD6-209ENST00000482596 SARS2Q9NP81 518 aaKnown RBP6.31□□□□□ -1.4
CHD6-209ENST00000482596 SAMSN1Q9NSI8 373 aaKnown RBP6.31□□□□□ -1.4
CHD6-209ENST00000482596 PCMTD2Q9NV79 361 aa6.31□□□□□ -1.4
CHD6-209ENST00000482596 TBC1D7Q9P0N9 293 aa6.31□□□□□ -1.4
CHD6-209ENST00000482596 DCTN4Q9UJW0 460 aa6.31□□□□□ -1.4
CHD6-209ENST00000482596 FRMD4BQ9Y2L6 1034 aa6.31□□□□□ -1.4
CHD6-209ENST00000482596 TENM3Q9P273 2699 aa6.31□□□□□ -1.4
CHD6-209ENST00000482596 A0A0D9SEW6 157 aa6.3□□□□□ -1.4
CHD6-209ENST00000482596 A8MV72 311 aaPredicted RBP6.3□□□□□ -1.4
CHD6-209ENST00000482596 LINC01387J3KSC0 135 aa6.3□□□□□ -1.4
CHD6-209ENST00000482596 AGPSO00116 658 aa6.3□□□□□ -1.4
CHD6-209ENST00000482596 KRIT1O00522 736 aa6.3□□□□□ -1.4
CHD6-209ENST00000482596 DDX3YO15523 660 aaKnown RBP6.3□□□□□ -1.4
CHD6-209ENST00000482596 TGFB1I1O43294 461 aa6.3□□□□□ -1.4
CHD6-209ENST00000482596 DNAJB6O75190 326 aa6.3□□□□□ -1.4
CHD6-209ENST00000482596 PMPCBO75439 489 aa6.3□□□□□ -1.4
CHD6-209ENST00000482596 VNN1O95497 513 aa6.3□□□□□ -1.4
CHD6-209ENST00000482596 HOXC4P09017 264 aaPredicted RBP6.3□□□□□ -1.4
CHD6-209ENST00000482596 VDRP11473 427 aa6.3□□□□□ -1.4
CHD6-209ENST00000482596 ABCD1P33897 745 aa6.3□□□□□ -1.4
CHD6-209ENST00000482596 LIG3P49916 1009 aa6.3□□□□□ -1.4
CHD6-209ENST00000482596 CASP5P51878 434 aa6.3□□□□□ -1.4
CHD6-209ENST00000482596 DAOAP59103 153 aa6.3□□□□□ -1.4
CHD6-209ENST00000482596 ABRQ12979 859 aa6.3□□□□□ -1.4
CHD6-209ENST00000482596 OLIG2Q13516 323 aa6.3□□□□□ -1.4
CHD6-209ENST00000482596 SETDB1Q15047 1291 aa6.3□□□□□ -1.4
CHD6-209ENST00000482596 RABEP1Q15276 862 aa6.3□□□□□ -1.4
CHD6-209ENST00000482596 CYP2A13Q16696 494 aa6.3□□□□□ -1.4
CHD6-209ENST00000482596 ZC3H12AQ5D1E8 599 aaKnown RBP6.3□□□□□ -1.4
CHD6-209ENST00000482596 L1TD1Q5T7N2 865 aaKnown RBP6.3□□□□□ -1.4
CHD6-209ENST00000482596 SPOPLQ6IQ16 392 aa6.3□□□□□ -1.4
CHD6-209ENST00000482596 FBXL22Q6P050 247 aa6.3□□□□□ -1.4
CHD6-209ENST00000482596 PCDH20Q8N6Y1 951 aaKnown RBP6.3□□□□□ -1.4
CHD6-209ENST00000482596 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.3□□□□□ -1.4
CHD6-209ENST00000482596 SVIPQ8NHG7 77 aa6.3□□□□□ -1.4
CHD6-209ENST00000482596 CLEC4CQ8WTT0 213 aa6.3□□□□□ -1.4
CHD6-209ENST00000482596 RSC1A1Q92681 617 aa6.3□□□□□ -1.4
CHD6-209ENST00000482596 TP53INP1Q96A56 240 aa6.3□□□□□ -1.4
CHD6-209ENST00000482596 CLIP3Q96DZ5 547 aa6.3□□□□□ -1.4
CHD6-209ENST00000482596 MRFAP1L1Q96HT8 127 aa6.3□□□□□ -1.4
CHD6-209ENST00000482596 SEC16BQ96JE7 1060 aa6.3□□□□□ -1.4
CHD6-209ENST00000482596 SLC41A2Q96JW4 573 aa6.3□□□□□ -1.4
CHD6-209ENST00000482596 LRFN5Q96NI6 719 aa6.3□□□□□ -1.4
CHD6-209ENST00000482596 IPO9Q96P70 1041 aaKnown RBP6.3□□□□□ -1.4
CHD6-209ENST00000482596 ACCSQ96QU6 501 aa6.3□□□□□ -1.4
CHD6-209ENST00000482596 PPP1R9BQ96SB3 815 aa6.3□□□□□ -1.4
CHD6-209ENST00000482596 FGFBP2Q9BYJ0 223 aa6.3□□□□□ -1.4
CHD6-209ENST00000482596 FRMD8Q9BZ67 464 aaPredicted RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms