RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 PTRHD1Q6GMV3 140 aaKnown RBP12.59□□□□□ -0.39
VPS52-218ENST00000482399 ENPP6Q6UWR7 440 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 OR13J1Q8NGT2 312 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 PNPT1Q8TCS8 783 aaKnown RBP12.59□□□□□ -0.39
VPS52-218ENST00000482399 FRS2Q8WU20 508 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 TMEM125Q96AQ2 219 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 FAM120BQ96EK7 910 aaKnown RBP12.59□□□□□ -0.39
VPS52-218ENST00000482399 HEPHQ9BQS7 1158 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 DPY30Q9C005 99 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 CD320Q9NPF0 282 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 CDH9Q9ULB4 789 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 CCL15-CCL14A0A0B4J2E2 113 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 A0A1W2PQ67 120 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 OR1I1O60431 355 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 IRF1P10914 325 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 AKT1P31749 480 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 CCL15Q16663 113 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 ZNF773Q6PK81 442 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 BLOC1S3Q6QNY0 202 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 EID3Q8N140 333 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 FAM86B1Q8N7N1 296 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 TERB1Q8NA31 727 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 ZNF540Q8NDQ6 660 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 ABHD11Q8NFV4 315 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 RAB2BQ8WUD1 216 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 ZUFSPQ96AP4 578 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 ABCC13Q9NSE7 274 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 FAM105AQ9NUU6 356 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 INTS10Q9NVR2 710 aaKnown RBP12.59□□□□□ -0.39
VPS52-218ENST00000482399 MTRRQ9UBK8 725 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 PTBP2Q9UKA9 531 aaKnown RBP12.59□□□□□ -0.39
VPS52-218ENST00000482399 PCDHGA8Q9Y5G5 932 aa12.59□□□□□ -0.39
VPS52-218ENST00000482399 LTBP1Q14766 1721 aa12.58□□□□□ -0.39
VPS52-218ENST00000482399 TTC36A6NLP5 189 aa12.58□□□□□ -0.4
VPS52-218ENST00000482399 FXYD1O00168 92 aa12.58□□□□□ -0.4
VPS52-218ENST00000482399 TNPO2O14787 897 aaKnown RBP12.58□□□□□ -0.4
VPS52-218ENST00000482399 FGF10O15520 208 aaPredicted RBP12.58□□□□□ -0.4
VPS52-218ENST00000482399 GPR32O75388 356 aa12.58□□□□□ -0.4
VPS52-218ENST00000482399 OR1G1P47890 313 aa12.58□□□□□ -0.4
VPS52-218ENST00000482399 HTR6P50406 440 aa12.58□□□□□ -0.4
VPS52-218ENST00000482399 AIF1P55008 147 aa12.58□□□□□ -0.4
VPS52-218ENST00000482399 UGT3A2Q3SY77 523 aa12.58□□□□□ -0.4
VPS52-218ENST00000482399 ARMCX6Q7L4S7 300 aa12.58□□□□□ -0.4
VPS52-218ENST00000482399 SYVN1Q86TM6 617 aa12.58□□□□□ -0.4
VPS52-218ENST00000482399 DTWD1Q8N5C7 304 aa12.58□□□□□ -0.4
VPS52-218ENST00000482399 RTL3Q8N8U3 475 aaKnown RBP12.58□□□□□ -0.4
VPS52-218ENST00000482399 POC5Q8NA72 575 aa12.58□□□□□ -0.4
VPS52-218ENST00000482399 MCOLN3Q8TDD5 553 aa12.58□□□□□ -0.4
VPS52-218ENST00000482399 NT5C3BQ969T7 300 aa12.58□□□□□ -0.4
VPS52-218ENST00000482399 TINF2Q9BSI4 451 aa12.58□□□□□ -0.4
VPS52-218ENST00000482399 NMUR1Q9HB89 426 aa12.58□□□□□ -0.4
VPS52-218ENST00000482399 TMA7Q9Y2S6 64 aaKnown RBP12.58□□□□□ -0.4
VPS52-218ENST00000482399 C17orf102A2RUQ5 167 aa12.58□□□□□ -0.4
VPS52-218ENST00000482399 SNAI1O95863 264 aaPredicted RBP12.58□□□□□ -0.4
VPS52-218ENST00000482399 TCF3P15923 654 aa12.58□□□□□ -0.4
VPS52-218ENST00000482399 ALOX12P18054 663 aa12.58□□□□□ -0.4
VPS52-218ENST00000482399 FSHRP23945 695 aa12.58□□□□□ -0.4
VPS52-218ENST00000482399 AQP1P29972 269 aa12.58□□□□□ -0.4
VPS52-218ENST00000482399 LEPRP48357 1165 aaKnown RBP12.58□□□□□ -0.4
VPS52-218ENST00000482399 SERPINB10P48595 397 aa12.58□□□□□ -0.4
VPS52-218ENST00000482399 HCAR3P49019 387 aa12.58□□□□□ -0.4
VPS52-218ENST00000482399 HLCSP50747 726 aa12.58□□□□□ -0.4
VPS52-218ENST00000482399 SEMG2Q02383 582 aa12.58□□□□□ -0.4
VPS52-218ENST00000482399 CPSF6Q16630 551 aaKnown RBP eCLIP12.58□□□□□ -0.4
VPS52-218ENST00000482399 DUSP28Q4G0W2 176 aa12.58□□□□□ -0.4
VPS52-218ENST00000482399 GNASQ5JWF2 1037 aa12.58□□□□□ -0.4
VPS52-218ENST00000482399 PACRGLQ8N7B6 248 aa12.58□□□□□ -0.4
VPS52-218ENST00000482399 ATAD1Q8NBU5 361 aa12.58□□□□□ -0.4
VPS52-218ENST00000482399 OR6K2Q8NGY2 324 aa12.58□□□□□ -0.4
VPS52-218ENST00000482399 SLC47A1Q96FL8 570 aa12.58□□□□□ -0.4
VPS52-218ENST00000482399 LRRC3Q9BY71 257 aa12.58□□□□□ -0.4
VPS52-218ENST00000482399 NDEL1Q9GZM8 345 aa12.58□□□□□ -0.4
VPS52-218ENST00000482399 TREX1Q9NSU2 369 aa12.58□□□□□ -0.4
VPS52-218ENST00000482399 RNF181Q9P0P0 153 aa12.58□□□□□ -0.4
VPS52-218ENST00000482399 UTS2RQ9UKP6 389 aa12.58□□□□□ -0.4
VPS52-218ENST00000482399 MICAL3Q7RTP6 2002 aa12.57□□□□□ -0.4
VPS52-218ENST00000482399 A0A0G2JLL6 359 aaPredicted RBP12.57□□□□□ -0.4
VPS52-218ENST00000482399 H0YJX3 145 aa12.57□□□□□ -0.4
VPS52-218ENST00000482399 hCG_2039718K7EN88 272 aa12.57□□□□□ -0.4
VPS52-218ENST00000482399 SLC7A4O43246 635 aa12.57□□□□□ -0.4
VPS52-218ENST00000482399 FAM20BO75063 409 aa12.57□□□□□ -0.4
VPS52-218ENST00000482399 CNOT3O75175 753 aaKnown RBP12.57□□□□□ -0.4
VPS52-218ENST00000482399 ANGPTL1O95841 491 aa12.57□□□□□ -0.4
VPS52-218ENST00000482399 MYCLP1P12525 358 aaPredicted RBP12.57□□□□□ -0.4
VPS52-218ENST00000482399 HSPA7P48741 367 aa12.57□□□□□ -0.4
VPS52-218ENST00000482399 IL2P60568 153 aa12.57□□□□□ -0.4
VPS52-218ENST00000482399 SEMA3BQ13214 749 aa12.57□□□□□ -0.4
VPS52-218ENST00000482399 ARHGEF7Q14155 803 aa12.57□□□□□ -0.4
VPS52-218ENST00000482399 TAF12Q16514 161 aa12.57□□□□□ -0.4
VPS52-218ENST00000482399 LCN8Q6JVE9 175 aa12.57□□□□□ -0.4
VPS52-218ENST00000482399 TMEM53Q6P2H8 277 aa12.57□□□□□ -0.4
VPS52-218ENST00000482399 PRRT2Q7Z6L0 340 aaPredicted RBP12.57□□□□□ -0.4
VPS52-218ENST00000482399 MINDY1Q8N5J2 469 aa12.57□□□□□ -0.4
VPS52-218ENST00000482399 OR7D4Q8NG98 312 aa12.57□□□□□ -0.4
VPS52-218ENST00000482399 EEF1AKMT1Q8WVE0 214 aa12.57□□□□□ -0.4
VPS52-218ENST00000482399 TSSK3Q96PN8 268 aa12.57□□□□□ -0.4
VPS52-218ENST00000482399 TRIM54Q9BYV2 358 aa12.57□□□□□ -0.4
VPS52-218ENST00000482399 POLR1EQ9GZS1 481 aaKnown RBP12.57□□□□□ -0.4
VPS52-218ENST00000482399 ABHD16BQ9H3Z7 469 aa12.57□□□□□ -0.4
VPS52-218ENST00000482399 SCN3BQ9NY72 215 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms