RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 KIF19Q2TAC6 998 aa3.74□□□□□ -1.81
CBX3-207ENST00000481300 TMEM35AQ53FP2 167 aa3.74□□□□□ -1.81
CBX3-207ENST00000481300 ZDHHC20Q5W0Z9 365 aa3.74□□□□□ -1.81
CBX3-207ENST00000481300 GPR139Q6DWJ6 353 aa3.74□□□□□ -1.81
CBX3-207ENST00000481300 KRTAP5-11Q6L8G4 156 aa3.74□□□□□ -1.81
CBX3-207ENST00000481300 TRNP1Q6NT89 227 aa3.74□□□□□ -1.81
CBX3-207ENST00000481300 C16orf54Q6UWD8 224 aa3.74□□□□□ -1.81
CBX3-207ENST00000481300 TMCO3Q6UWJ1 677 aa3.74□□□□□ -1.81
CBX3-207ENST00000481300 TPRG1Q6ZUI0 275 aa3.74□□□□□ -1.81
CBX3-207ENST00000481300 KBTBD6Q86V97 674 aa3.74□□□□□ -1.81
CBX3-207ENST00000481300 MAP7D3Q8IWC1 876 aa3.74□□□□□ -1.81
CBX3-207ENST00000481300 PM20D2Q8IYS1 436 aa3.74□□□□□ -1.81
CBX3-207ENST00000481300 AFAP1Q8N556 730 aa3.74□□□□□ -1.81
CBX3-207ENST00000481300 IL17RCQ8NAC3 791 aa3.74□□□□□ -1.81
CBX3-207ENST00000481300 SMRP1Q8NCR6 262 aa3.74□□□□□ -1.81
CBX3-207ENST00000481300 ACVR1CQ8NER5 493 aa3.74□□□□□ -1.81
CBX3-207ENST00000481300 LILRB1Q8NHL6 650 aaPredicted RBP3.74□□□□□ -1.81
CBX3-207ENST00000481300 DUSP19Q8WTR2 217 aa3.74□□□□□ -1.81
CBX3-207ENST00000481300 SLC38A5Q8WUX1 472 aa3.74□□□□□ -1.81
CBX3-207ENST00000481300 PRPF31Q8WWY3 499 aaKnown RBP3.74□□□□□ -1.81
CBX3-207ENST00000481300 FIG4Q92562 907 aa3.74□□□□□ -1.81
CBX3-207ENST00000481300 PIGTQ969N2 578 aa3.74□□□□□ -1.81
CBX3-207ENST00000481300 LRRC59Q96AG4 307 aaKnown RBP3.74□□□□□ -1.81
CBX3-207ENST00000481300 SLC22A18Q96BI1 424 aa3.74□□□□□ -1.81
CBX3-207ENST00000481300 CDCA5Q96FF9 252 aa3.74□□□□□ -1.81
CBX3-207ENST00000481300 BICD1Q96G01 975 aa3.74□□□□□ -1.81
CBX3-207ENST00000481300 PAFAH2Q99487 392 aa3.74□□□□□ -1.81
CBX3-207ENST00000481300 RTN4RQ9BZR6 473 aa3.74□□□□□ -1.81
CBX3-207ENST00000481300 CD93Q9NPY3 652 aa3.74□□□□□ -1.81
CBX3-207ENST00000481300 PADI3Q9ULW8 664 aa3.74□□□□□ -1.81
CBX3-207ENST00000481300 PPIEQ9UNP9 301 aaKnown RBP3.74□□□□□ -1.81
CBX3-207ENST00000481300 ROCK1Q13464 1354 aa3.74□□□□□ -1.81
CBX3-207ENST00000481300 ANKRD30AQ9BXX3 1397 aa3.74□□□□□ -1.81
CBX3-207ENST00000481300 RAB3GAP2Q9H2M9 1393 aa3.74□□□□□ -1.81
CBX3-207ENST00000481300 EVPLQ92817 2033 aa3.73□□□□□ -1.81
CBX3-207ENST00000481300 DAPK1P53355 1430 aa3.73□□□□□ -1.81
CBX3-207ENST00000481300 AKNAQ7Z591 1439 aa3.73□□□□□ -1.81
CBX3-207ENST00000481300 KIAA1107Q9UPP5 1409 aa3.73□□□□□ -1.81
CBX3-207ENST00000481300 SAA2-SAA4A0A096LPE2 208 aa3.73□□□□□ -1.81
CBX3-207ENST00000481300 A0A1W2PR77 199 aa3.73□□□□□ -1.81
CBX3-207ENST00000481300 PLSCR5A0PG75 271 aa3.73□□□□□ -1.81
CBX3-207ENST00000481300 MAGEA13PA6NCF6 341 aa3.73□□□□□ -1.81
CBX3-207ENST00000481300 SYNDIG1LA6NDD5 238 aa3.73□□□□□ -1.81
CBX3-207ENST00000481300 PRR23D1E9PI22 279 aaPredicted RBP3.73□□□□□ -1.81
CBX3-207ENST00000481300 CLGNO14967 610 aa3.73□□□□□ -1.81
CBX3-207ENST00000481300 SLC16A5O15375 505 aa3.73□□□□□ -1.81
CBX3-207ENST00000481300 RSL1D1O76021 490 aaKnown RBP3.73□□□□□ -1.81
CBX3-207ENST00000481300 DDNO94850 711 aaPredicted RBP3.73□□□□□ -1.81
CBX3-207ENST00000481300 PRR23D2P0DMB1 279 aaPredicted RBP3.73□□□□□ -1.81
CBX3-207ENST00000481300 POLR2CP19387 275 aaPredicted RBP3.73□□□□□ -1.81
CBX3-207ENST00000481300 IL15P40933 162 aaPredicted RBP3.73□□□□□ -1.81
CBX3-207ENST00000481300 MMP14P50281 582 aa3.73□□□□□ -1.81
CBX3-207ENST00000481300 SUOXP51687 545 aa3.73□□□□□ -1.81
CBX3-207ENST00000481300 ARSEP51690 589 aa3.73□□□□□ -1.81
CBX3-207ENST00000481300 PPP2R2BQ00005 443 aa3.73□□□□□ -1.81
CBX3-207ENST00000481300 BECN1Q14457 450 aa3.73□□□□□ -1.81
CBX3-207ENST00000481300 MVPQ14764 893 aaKnown RBP3.73□□□□□ -1.81
CBX3-207ENST00000481300 PCLAFQ15004 111 aa3.73□□□□□ -1.81
CBX3-207ENST00000481300 DLG2Q15700 870 aa3.73□□□□□ -1.81
CBX3-207ENST00000481300 CCDC96Q2M329 555 aa3.73□□□□□ -1.81
CBX3-207ENST00000481300 ZNF585BQ52M93 769 aa3.73□□□□□ -1.81
CBX3-207ENST00000481300 KRTCAP3Q53RY4 240 aa3.73□□□□□ -1.81
CBX3-207ENST00000481300 IGSF11Q5DX21 431 aa3.73□□□□□ -1.81
CBX3-207ENST00000481300 BMP2KLQ5H9B9 411 aa3.73□□□□□ -1.81
CBX3-207ENST00000481300 IRAK1BP1Q5VVH5 260 aa3.73□□□□□ -1.81
CBX3-207ENST00000481300 LCN10Q6JVE6 187 aa3.73□□□□□ -1.81
CBX3-207ENST00000481300 DNAAF5Q86Y56 855 aa3.73□□□□□ -1.81
CBX3-207ENST00000481300 LINC00346Q8IVM7 164 aa3.73□□□□□ -1.81
CBX3-207ENST00000481300 ODF3L1Q8IXM7 274 aa3.73□□□□□ -1.81
CBX3-207ENST00000481300 SLC5A8Q8N695 610 aa3.73□□□□□ -1.81
CBX3-207ENST00000481300 OR5R1Q8NH85 324 aa3.73□□□□□ -1.81
CBX3-207ENST00000481300 SLC20A1Q8WUM9 679 aa3.73□□□□□ -1.81
CBX3-207ENST00000481300 SLC44A1Q8WWI5 657 aa3.73□□□□□ -1.81
CBX3-207ENST00000481300 ABTB1Q969K4 478 aaPredicted RBP3.73□□□□□ -1.81
CBX3-207ENST00000481300 IGSF21Q96ID5 467 aa3.73□□□□□ -1.81
CBX3-207ENST00000481300 DACH2Q96NX9 599 aa3.73□□□□□ -1.81
CBX3-207ENST00000481300 DUX5Q96PT3 197 aa3.73□□□□□ -1.81
CBX3-207ENST00000481300 SLF1Q9BQI6 1058 aa3.73□□□□□ -1.81
CBX3-207ENST00000481300 MRPL1Q9BYD6 325 aaKnown RBP3.73□□□□□ -1.81
CBX3-207ENST00000481300 UBTD1Q9HAC8 227 aa3.73□□□□□ -1.81
CBX3-207ENST00000481300 CHMP1AQ9HD42 196 aaPredicted RBP3.73□□□□□ -1.81
CBX3-207ENST00000481300 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.73□□□□□ -1.81
CBX3-207ENST00000481300 PLSCR4Q9NRQ2 329 aa3.73□□□□□ -1.81
CBX3-207ENST00000481300 ANKEF1Q9NU02 776 aa3.73□□□□□ -1.81
CBX3-207ENST00000481300 DNAJB4Q9UDY4 337 aa3.73□□□□□ -1.81
CBX3-207ENST00000481300 POU2F3Q9UKI9 436 aa3.73□□□□□ -1.81
CBX3-207ENST00000481300 PLAGL1Q9UM63 463 aa3.73□□□□□ -1.81
CBX3-207ENST00000481300 PCDHGA5Q9Y5G8 931 aa3.73□□□□□ -1.81
CBX3-207ENST00000481300 CFAP43Q8NDM7 1665 aa3.73□□□□□ -1.81
CBX3-207ENST00000481300 ADCY10Q96PN6 1610 aa3.73□□□□□ -1.81
CBX3-207ENST00000481300 PLEKHH2Q8IVE3 1493 aa3.73□□□□□ -1.81
CBX3-207ENST00000481300 PDS5AQ29RF7 1337 aaKnown RBP3.72□□□□□ -1.81
CBX3-207ENST00000481300 PASKQ96RG2 1323 aa3.72□□□□□ -1.81
CBX3-207ENST00000481300 HFM1A2PYH4 1435 aa3.72□□□□□ -1.81
CBX3-207ENST00000481300 NAIPQ13075 1403 aa3.72□□□□□ -1.81
CBX3-207ENST00000481300 SCAPERQ9BY12 1400 aa3.72□□□□□ -1.81
CBX3-207ENST00000481300 ARHGAP5Q13017 1502 aa3.72□□□□□ -1.81
CBX3-207ENST00000481300 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.72□□□□□ -1.81
CBX3-207ENST00000481300 LNP1A1A4G5 178 aa3.72□□□□□ -1.81
CBX3-207ENST00000481300 DENND3A2RUS2 1198 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms