RNA–Protein interactions for RNA: ENST00000479320.5

HLA-A-206, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,334 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-206ENST00000479320 STK10O94804 968 aaKnown RBP17.52■□□□□ 0.4
HLA-A-206ENST00000479320 FGF3P11487 239 aaPredicted RBP17.52■□□□□ 0.4
HLA-A-206ENST00000479320 XRCC1P18887 633 aaPredicted RBP17.52■□□□□ 0.4
HLA-A-206ENST00000479320 PPM1FP49593 454 aaPredicted RBP17.52■□□□□ 0.4
HLA-A-206ENST00000479320 UBE2IP63279 158 aaKnown RBP17.52■□□□□ 0.4
HLA-A-206ENST00000479320 PRPSAP1Q14558 356 aa17.52■□□□□ 0.4
HLA-A-206ENST00000479320 WDR74Q6RFH5 385 aaPredicted RBP17.52■□□□□ 0.4
HLA-A-206ENST00000479320 C11orf96Q7Z7L8 435 aa17.52■□□□□ 0.4
HLA-A-206ENST00000479320 SNRNP27Q8WVK2 155 aaKnown RBP17.52■□□□□ 0.4
HLA-A-206ENST00000479320 SPATA13Q96N96 652 aa17.52■□□□□ 0.4
HLA-A-206ENST00000479320 TTC25Q96NG3 672 aa17.52■□□□□ 0.4
HLA-A-206ENST00000479320 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.52■□□□□ 0.4
HLA-A-206ENST00000479320 B3GNT4Q9C0J1 378 aa17.52■□□□□ 0.4
HLA-A-206ENST00000479320 FOXJ2Q9P0K8 574 aa17.52■□□□□ 0.4
HLA-A-206ENST00000479320 ARL5AQ9Y689 179 aa17.52■□□□□ 0.4
HLA-A-206ENST00000479320 K7ENP7 123 aa17.51■□□□□ 0.39
HLA-A-206ENST00000479320 ATXN7O15265 892 aaPredicted RBP17.51■□□□□ 0.39
HLA-A-206ENST00000479320 STX7O15400 261 aaKnown RBP17.51■□□□□ 0.39
HLA-A-206ENST00000479320 LPOP22079 712 aaPredicted RBP17.51■□□□□ 0.39
HLA-A-206ENST00000479320 SLC19A1P41440 591 aa17.51■□□□□ 0.39
HLA-A-206ENST00000479320 EPHA4P54764 986 aa17.51■□□□□ 0.39
HLA-A-206ENST00000479320 MSLNQ13421 630 aaPredicted RBP17.51■□□□□ 0.39
HLA-A-206ENST00000479320 GTF2H3Q13889 308 aa17.51■□□□□ 0.39
HLA-A-206ENST00000479320 TAF1AQ15573 450 aaPredicted RBP17.51■□□□□ 0.39
HLA-A-206ENST00000479320 TMEM164Q5U3C3 297 aa17.51■□□□□ 0.39
HLA-A-206ENST00000479320 INO80CQ6PI98 192 aaPredicted RBP17.51■□□□□ 0.39
HLA-A-206ENST00000479320 ABRAXAS1Q6UWZ7 409 aa17.51■□□□□ 0.39
HLA-A-206ENST00000479320 CCDC81Q6ZN84 652 aa17.51■□□□□ 0.39
HLA-A-206ENST00000479320 ZFAND4Q86XD8 727 aa17.51■□□□□ 0.39
HLA-A-206ENST00000479320 TRAPPC5Q8IUR0 188 aa17.51■□□□□ 0.39
HLA-A-206ENST00000479320 AVL9Q8NBF6 648 aa17.51■□□□□ 0.39
HLA-A-206ENST00000479320 TTC13Q8NBP0 860 aa17.51■□□□□ 0.39
HLA-A-206ENST00000479320 AGBL5Q8NDL9 886 aa17.51■□□□□ 0.39
HLA-A-206ENST00000479320 KIF18AQ8NI77 898 aa17.51■□□□□ 0.39
HLA-A-206ENST00000479320 NCSTNQ92542 709 aa17.51■□□□□ 0.39
HLA-A-206ENST00000479320 CCNL2Q96S94 520 aaPredicted RBP17.51■□□□□ 0.39
HLA-A-206ENST00000479320 TBC1D10AQ9BXI6 508 aa17.51■□□□□ 0.39
HLA-A-206ENST00000479320 WDR70Q9NW82 654 aa17.51■□□□□ 0.39
HLA-A-206ENST00000479320 ZNF624Q9P2J8 865 aaPredicted RBP17.51■□□□□ 0.39
HLA-A-206ENST00000479320 ZNF106Q9H2Y7 1883 aaKnown RBP17.51■□□□□ 0.39
HLA-A-206ENST00000479320 GOLGA6L9A6NEM1 432 aa17.5■□□□□ 0.39
HLA-A-206ENST00000479320 C5orf60A6NFR6 353 aa17.5■□□□□ 0.39
HLA-A-206ENST00000479320 C2orf81A6NN90 581 aa17.5■□□□□ 0.39
HLA-A-206ENST00000479320 A8MU76 341 aa17.5■□□□□ 0.39
HLA-A-206ENST00000479320 PDZK1P1A8MUH7 402 aa17.5■□□□□ 0.39
HLA-A-206ENST00000479320 EFSO43281 561 aa17.5■□□□□ 0.39
HLA-A-206ENST00000479320 LIPCP11150 499 aa17.5■□□□□ 0.39
HLA-A-206ENST00000479320 BRAFP15056 766 aa17.5■□□□□ 0.39
HLA-A-206ENST00000479320 IDSP22304 550 aa17.5■□□□□ 0.39
HLA-A-206ENST00000479320 RPL10P27635 214 aaKnown RBP17.5■□□□□ 0.39
HLA-A-206ENST00000479320 CSTF2P33240 577 aaKnown RBP eCLIP17.5■□□□□ 0.39
HLA-A-206ENST00000479320 KLF1Q13351 362 aaPredicted RBP17.5■□□□□ 0.39
HLA-A-206ENST00000479320 ITGA9Q13797 1035 aa17.5■□□□□ 0.39
HLA-A-206ENST00000479320 TERF2Q15554 542 aa17.5■□□□□ 0.39
HLA-A-206ENST00000479320 SEPT7Q16181 437 aaKnown RBP17.5■□□□□ 0.39
HLA-A-206ENST00000479320 LDLRAP1Q5SW96 308 aa17.5■□□□□ 0.39
HLA-A-206ENST00000479320 GPRC6AQ5T6X5 926 aa17.5■□□□□ 0.39
HLA-A-206ENST00000479320 RASGEF1AQ8N9B8 481 aa17.5■□□□□ 0.39
HLA-A-206ENST00000479320 DDHD1Q8NEL9 900 aa17.5■□□□□ 0.39
HLA-A-206ENST00000479320 OR4K2Q8NGD2 314 aa17.5■□□□□ 0.39
HLA-A-206ENST00000479320 ZNF398Q8TD17 642 aa17.5■□□□□ 0.39
HLA-A-206ENST00000479320 HES6Q96HZ4 224 aa17.5■□□□□ 0.39
HLA-A-206ENST00000479320 TAAR9Q96RI9 348 aa17.5■□□□□ 0.39
HLA-A-206ENST00000479320 OCIAD1Q9NX40 245 aa17.5■□□□□ 0.39
HLA-A-206ENST00000479320 KCTD3Q9Y597 815 aa17.5■□□□□ 0.39
HLA-A-206ENST00000479320 CAPN6Q9Y6Q1 641 aa17.5■□□□□ 0.39
HLA-A-206ENST00000479320 SDK2Q58EX2 2172 aa17.5■□□□□ 0.39
HLA-A-206ENST00000479320 LILRA5A6NI73 299 aa17.49■□□□□ 0.39
HLA-A-206ENST00000479320 EIF4E1BA6NMX2 242 aaKnown RBP17.49■□□□□ 0.39
HLA-A-206ENST00000479320 ZNF189O75820 626 aaPredicted RBP17.49■□□□□ 0.39
HLA-A-206ENST00000479320 VIPP01282 170 aa17.49■□□□□ 0.39
HLA-A-206ENST00000479320 MAPK9P45984 424 aa17.49■□□□□ 0.39
HLA-A-206ENST00000479320 ARSDP51689 593 aa17.49■□□□□ 0.39
HLA-A-206ENST00000479320 CTSCP53634 463 aa17.49■□□□□ 0.39
HLA-A-206ENST00000479320 DRG2P55039 364 aaKnown RBP17.49■□□□□ 0.39
HLA-A-206ENST00000479320 SPARCL1Q14515 664 aa17.49■□□□□ 0.39
HLA-A-206ENST00000479320 SNAP47Q5SQN1 464 aa17.49■□□□□ 0.39
HLA-A-206ENST00000479320 AGAP9Q5VTM2 703 aa17.49■□□□□ 0.39
HLA-A-206ENST00000479320 DENND5AQ6IQ26 1287 aa17.49■□□□□ 0.39
HLA-A-206ENST00000479320 PCSK4Q6UW60 755 aa17.49■□□□□ 0.39
HLA-A-206ENST00000479320 WASH2PQ6VEQ5 465 aa17.49■□□□□ 0.39
HLA-A-206ENST00000479320 ARHGAP22Q7Z5H3 698 aa17.49■□□□□ 0.39
HLA-A-206ENST00000479320 DTX1Q86Y01 620 aa17.49■□□□□ 0.39
HLA-A-206ENST00000479320 KLHDC8BQ8IXV7 354 aa17.49■□□□□ 0.39
HLA-A-206ENST00000479320 RNF10Q8N5U6 811 aaKnown RBP17.49■□□□□ 0.39
HLA-A-206ENST00000479320 LSM14AQ8ND56 463 aaKnown RBP17.49■□□□□ 0.39
HLA-A-206ENST00000479320 SLC39A7Q92504 469 aa17.49■□□□□ 0.39
HLA-A-206ENST00000479320 PMEPA1Q969W9 287 aa17.49■□□□□ 0.39
HLA-A-206ENST00000479320 PPP1R2P1Q96PQ5 205 aa17.49■□□□□ 0.39
HLA-A-206ENST00000479320 ZCCHC2Q9C0B9 1178 aaKnown RBP17.49■□□□□ 0.39
HLA-A-206ENST00000479320 UCK1Q9HA47 277 aa17.49■□□□□ 0.39
HLA-A-206ENST00000479320 ARNT2Q9HBZ2 717 aa17.49■□□□□ 0.39
HLA-A-206ENST00000479320 WASH6PQ9NQA3 447 aa17.49■□□□□ 0.39
HLA-A-206ENST00000479320 SMOXQ9NWM0 555 aa17.49■□□□□ 0.39
HLA-A-206ENST00000479320 R3HDM2Q9Y2K5 976 aaKnown RBP17.49■□□□□ 0.39
HLA-A-206ENST00000479320 ATMQ13315 3056 aa17.49■□□□□ 0.39
HLA-A-206ENST00000479320 TCRBV7S2A1N4TA0A589 114 aa17.48■□□□□ 0.39
HLA-A-206ENST00000479320 TK2O00142 265 aa17.48■□□□□ 0.39
HLA-A-206ENST00000479320 KCNJ13O60928 360 aa17.48■□□□□ 0.39
HLA-A-206ENST00000479320 POP7O75817 140 aaKnown RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms