RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 LRIT1Q9P2V4 623 aa20.17■□□□□ 0.82
VARS-224ENST00000479051 TBC1D29Q9UFV1 150 aa20.17■□□□□ 0.82
VARS-224ENST00000479051 SOX13Q9UN79 622 aa20.17■□□□□ 0.82
VARS-224ENST00000479051 WASF3Q9UPY6 502 aa20.17■□□□□ 0.82
VARS-224ENST00000479051 PLXNB3Q9ULL4 1909 aa20.17■□□□□ 0.82
VARS-224ENST00000479051 ZFC3H1O60293 1989 aaKnown RBP20.16■□□□□ 0.82
VARS-224ENST00000479051 ARHGEF17Q96PE2 2063 aaPredicted RBP20.16■□□□□ 0.82
VARS-224ENST00000479051 KIR2DS5A0A0G2JLQ3 304 aa20.16■□□□□ 0.82
VARS-224ENST00000479051 A0A0G2JNG1 304 aa20.16■□□□□ 0.82
VARS-224ENST00000479051 MAGEB16A2A368 324 aa20.16■□□□□ 0.82
VARS-224ENST00000479051 PDZK1P1A8MUH7 402 aa20.16■□□□□ 0.82
VARS-224ENST00000479051 F8W8V4 182 aa20.16■□□□□ 0.82
VARS-224ENST00000479051 KIR2DS3K7RE56 304 aa20.16■□□□□ 0.82
VARS-224ENST00000479051 SMAPO00193 183 aa20.16■□□□□ 0.82
VARS-224ENST00000479051 NDC80O14777 642 aa20.16■□□□□ 0.82
VARS-224ENST00000479051 FOXN2P32314 431 aa20.16■□□□□ 0.82
VARS-224ENST00000479051 CDKN1CP49918 316 aaPredicted RBP20.16■□□□□ 0.82
VARS-224ENST00000479051 KIR2DS5Q14953 304 aa20.16■□□□□ 0.82
VARS-224ENST00000479051 BCL7AQ4VC05 210 aa20.16■□□□□ 0.82
VARS-224ENST00000479051 RNASEH2BQ5TBB1 312 aaKnown RBP20.16■□□□□ 0.82
VARS-224ENST00000479051 IZUMO3Q5VZ72 239 aa20.16■□□□□ 0.82
VARS-224ENST00000479051 MAATS1Q7Z4T9 603 aa20.16■□□□□ 0.82
VARS-224ENST00000479051 SLC9B2Q86UD5 537 aa20.16■□□□□ 0.82
VARS-224ENST00000479051 CAND1Q86VP6 1230 aaKnown RBP20.16■□□□□ 0.82
VARS-224ENST00000479051 SFRP1Q8N474 314 aa20.16■□□□□ 0.82
VARS-224ENST00000479051 SGF29Q96ES7 293 aa20.16■□□□□ 0.82
VARS-224ENST00000479051 SGSM3Q96HU1 749 aa20.16■□□□□ 0.82
VARS-224ENST00000479051 SYNDIG1Q9H7V2 258 aa20.16■□□□□ 0.82
VARS-224ENST00000479051 SLC23A2Q9UGH3 650 aa20.16■□□□□ 0.82
VARS-224ENST00000479051 CLCA2Q9UQC9 943 aa20.16■□□□□ 0.82
VARS-224ENST00000479051 RNF215Q9Y6U7 377 aa20.16■□□□□ 0.82
VARS-224ENST00000479051 IGLV3-16A0A075B6K0 115 aa20.15■□□□□ 0.82
VARS-224ENST00000479051 OR51F1A6NGY5 319 aa20.15■□□□□ 0.82
VARS-224ENST00000479051 QSOX1O00391 747 aa20.15■□□□□ 0.82
VARS-224ENST00000479051 TTI1O43156 1089 aa20.15■□□□□ 0.82
VARS-224ENST00000479051 AVILO75366 819 aa20.15■□□□□ 0.82
VARS-224ENST00000479051 TOP3BO95985 862 aaKnown RBP20.15■□□□□ 0.82
VARS-224ENST00000479051 SPINK2P20155 84 aa20.15■□□□□ 0.82
VARS-224ENST00000479051 PBLDP30039 288 aaPredicted RBP20.15■□□□□ 0.82
VARS-224ENST00000479051 HALP42357 657 aa20.15■□□□□ 0.82
VARS-224ENST00000479051 NSG1P42857 185 aa20.15■□□□□ 0.82
VARS-224ENST00000479051 DMPKQ09013 629 aa20.15■□□□□ 0.82
VARS-224ENST00000479051 DBN1Q16643 649 aa20.15■□□□□ 0.82
VARS-224ENST00000479051 IYDQ6PHW0 289 aa20.15■□□□□ 0.82
VARS-224ENST00000479051 C11orf96Q7Z7L8 435 aa20.15■□□□□ 0.82
VARS-224ENST00000479051 CCNJLQ8IV13 435 aa20.15■□□□□ 0.82
VARS-224ENST00000479051 SFTPA2Q8IWL1 248 aa20.15■□□□□ 0.82
VARS-224ENST00000479051 PIANPQ8IYJ0 282 aa20.15■□□□□ 0.82
VARS-224ENST00000479051 CACTIN-AS1Q8N1I8 211 aa20.15■□□□□ 0.82
VARS-224ENST00000479051 PATE1Q8WXA2 126 aa20.15■□□□□ 0.82
VARS-224ENST00000479051 ZNF592Q92610 1267 aa20.15■□□□□ 0.82
VARS-224ENST00000479051 DEPDC7Q96QD5 511 aa20.15■□□□□ 0.82
VARS-224ENST00000479051 PRDM8Q9NQV8 689 aa20.15■□□□□ 0.82
VARS-224ENST00000479051 TREX1Q9NSU2 369 aa20.15■□□□□ 0.82
VARS-224ENST00000479051 CATSPERZQ9NTU4 200 aa20.15■□□□□ 0.82
VARS-224ENST00000479051 KLK13Q9UKR3 277 aa20.15■□□□□ 0.82
VARS-224ENST00000479051 NCOR2Q9Y618 2525 aa20.15■□□□□ 0.82
VARS-224ENST00000479051 FAM221BA6H8Z2 402 aa20.14■□□□□ 0.81
VARS-224ENST00000479051 MGAT4DA6NG13 374 aa20.14■□□□□ 0.81
VARS-224ENST00000479051 TCEA3O75764 348 aa20.14■□□□□ 0.81
VARS-224ENST00000479051 URI1O94763 535 aaPredicted RBP20.14■□□□□ 0.81
VARS-224ENST00000479051 AP2A2O94973 939 aa20.14■□□□□ 0.81
VARS-224ENST00000479051 MT-CO3P00414 261 aa20.14■□□□□ 0.81
VARS-224ENST00000479051 NMBRP28336 390 aa20.14■□□□□ 0.81
VARS-224ENST00000479051 FASLGP48023 281 aa20.14■□□□□ 0.81
VARS-224ENST00000479051 PRLHRP49683 370 aa20.14■□□□□ 0.81
VARS-224ENST00000479051 B4GALNT1Q00973 533 aa20.14■□□□□ 0.81
VARS-224ENST00000479051 SPIDRQ14159 915 aa20.14■□□□□ 0.81
VARS-224ENST00000479051 MORF4L2Q15014 288 aa20.14■□□□□ 0.81
VARS-224ENST00000479051 DNAJC21Q5F1R6 531 aaKnown RBP20.14■□□□□ 0.81
VARS-224ENST00000479051 WASH2PQ6VEQ5 465 aa20.14■□□□□ 0.81
VARS-224ENST00000479051 PACS1Q6VY07 963 aa20.14■□□□□ 0.81
VARS-224ENST00000479051 TRIM48Q8IWZ4 208 aa20.14■□□□□ 0.81
VARS-224ENST00000479051 OTUD6BQ8N6M0 293 aa20.14■□□□□ 0.81
VARS-224ENST00000479051 OR2L2Q8NH16 312 aa20.14■□□□□ 0.81
VARS-224ENST00000479051 SLC37A2Q8TED4 501 aa20.14■□□□□ 0.81
VARS-224ENST00000479051 SH3KBP1Q96B97 665 aa20.14■□□□□ 0.81
VARS-224ENST00000479051 LINC00615Q96LM1 132 aaPredicted RBP20.14■□□□□ 0.81
VARS-224ENST00000479051 TRIM51Q9BSJ1 452 aa20.14■□□□□ 0.81
VARS-224ENST00000479051 WASH6PQ9NQA3 447 aa20.14■□□□□ 0.81
VARS-224ENST00000479051 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.14■□□□□ 0.81
VARS-224ENST00000479051 CDC23Q9UJX2 597 aa20.14■□□□□ 0.81
VARS-224ENST00000479051 MSRB2Q9Y3D2 182 aa20.14■□□□□ 0.81
VARS-224ENST00000479051 TRBV23OR9-2A0A075B6M9 112 aa20.13■□□□□ 0.81
VARS-224ENST00000479051 A6NCN8 305 aa20.13■□□□□ 0.81
VARS-224ENST00000479051 FAM187AA6NFU0 413 aa20.13■□□□□ 0.81
VARS-224ENST00000479051 PFDN6O15212 129 aa20.13■□□□□ 0.81
VARS-224ENST00000479051 GSTM1P09488 218 aa20.13■□□□□ 0.81
VARS-224ENST00000479051 PRSS56P0CW18 603 aa20.13■□□□□ 0.81
VARS-224ENST00000479051 GPR3P46089 330 aa20.13■□□□□ 0.81
VARS-224ENST00000479051 TTPAP49638 278 aa20.13■□□□□ 0.81
VARS-224ENST00000479051 GSTM4Q03013 218 aa20.13■□□□□ 0.81
VARS-224ENST00000479051 HHEXQ03014 270 aa20.13■□□□□ 0.81
VARS-224ENST00000479051 SEPT7Q16181 437 aaKnown RBP20.13■□□□□ 0.81
VARS-224ENST00000479051 AGAP9Q5VTM2 703 aa20.13■□□□□ 0.81
VARS-224ENST00000479051 ZNF449Q6P9G9 518 aa20.13■□□□□ 0.81
VARS-224ENST00000479051 RBM44Q6ZP01 1051 aaKnown RBP20.13■□□□□ 0.81
VARS-224ENST00000479051 ZNF438Q7Z4V0 828 aa20.13■□□□□ 0.81
VARS-224ENST00000479051 MPP5Q8N3R9 675 aa20.13■□□□□ 0.81
VARS-224ENST00000479051 BEND7Q8N7W2 519 aaPredicted RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms