RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 GFM1Q96RP9 751 aaKnown RBP4.07□□□□□ -1.76
CDC42BPA-212ENST00000478573 SLF1Q9BQI6 1058 aa4.07□□□□□ -1.76
CDC42BPA-212ENST00000478573 ESRP2Q9H6T0 727 aaKnown RBP4.07□□□□□ -1.76
CDC42BPA-212ENST00000478573 LTB4R2Q9NPC1 389 aa4.07□□□□□ -1.76
CDC42BPA-212ENST00000478573 SETD4Q9NVD3 440 aa4.07□□□□□ -1.76
CDC42BPA-212ENST00000478573 MORF4L1Q9UBU8 362 aa4.07□□□□□ -1.76
CDC42BPA-212ENST00000478573 ERVK-11Q9UQG0 969 aa4.07□□□□□ -1.76
CDC42BPA-212ENST00000478573 STON1Q9Y6Q2 735 aa4.07□□□□□ -1.76
CDC42BPA-212ENST00000478573 MAU2Q9Y6X3 613 aa4.07□□□□□ -1.76
CDC42BPA-212ENST00000478573 EP400Q96L91 3159 aa4.06□□□□□ -1.76
CDC42BPA-212ENST00000478573 COL5A2P05997 1499 aaPredicted RBP4.06□□□□□ -1.76
CDC42BPA-212ENST00000478573 OVOS2A0A0J9YW53 1432 aa4.06□□□□□ -1.76
CDC42BPA-212ENST00000478573 OVOS2Q6IE36 1432 aa4.06□□□□□ -1.76
CDC42BPA-212ENST00000478573 SMTNL1A8MU46 457 aa4.06□□□□□ -1.76
CDC42BPA-212ENST00000478573 I6L893 689 aaPredicted RBP4.06□□□□□ -1.76
CDC42BPA-212ENST00000478573 HS6ST1O60243 411 aa4.06□□□□□ -1.76
CDC42BPA-212ENST00000478573 SOX30O94993 753 aa4.06□□□□□ -1.76
CDC42BPA-212ENST00000478573 FTCDO95954 541 aa4.06□□□□□ -1.76
CDC42BPA-212ENST00000478573 ACTN1P12814 892 aa4.06□□□□□ -1.76
CDC42BPA-212ENST00000478573 IL7RP16871 459 aa4.06□□□□□ -1.76
CDC42BPA-212ENST00000478573 DDX5P17844 614 aaKnown RBP4.06□□□□□ -1.76
CDC42BPA-212ENST00000478573 PIK3CAP42336 1068 aa4.06□□□□□ -1.76
CDC42BPA-212ENST00000478573 SLC15A1P46059 708 aa4.06□□□□□ -1.76
CDC42BPA-212ENST00000478573 ACSM2AQ08AH3 577 aa4.06□□□□□ -1.76
CDC42BPA-212ENST00000478573 NAE1Q13564 534 aa4.06□□□□□ -1.76
CDC42BPA-212ENST00000478573 C2orf68Q2NKX9 166 aa4.06□□□□□ -1.76
CDC42BPA-212ENST00000478573 ZNF284Q2VY69 593 aa4.06□□□□□ -1.76
CDC42BPA-212ENST00000478573 MFSD4BQ5TF39 518 aa4.06□□□□□ -1.76
CDC42BPA-212ENST00000478573 ACSM2BQ68CK6 577 aa4.06□□□□□ -1.76
CDC42BPA-212ENST00000478573 HIST2H2BCQ6DN03 193 aa4.06□□□□□ -1.76
CDC42BPA-212ENST00000478573 HIST2H2BDQ6DRA6 164 aa4.06□□□□□ -1.76
CDC42BPA-212ENST00000478573 ANKRD54Q6NXT1 300 aa4.06□□□□□ -1.76
CDC42BPA-212ENST00000478573 SPSB3Q6PJ21 355 aa4.06□□□□□ -1.76
CDC42BPA-212ENST00000478573 PQLC2Q6ZP29 291 aa4.06□□□□□ -1.76
CDC42BPA-212ENST00000478573 HAPLN4Q86UW8 402 aa4.06□□□□□ -1.76
CDC42BPA-212ENST00000478573 FJX1Q86VR8 437 aa4.06□□□□□ -1.76
CDC42BPA-212ENST00000478573 POC5Q8NA72 575 aa4.06□□□□□ -1.76
CDC42BPA-212ENST00000478573 IGSF8Q969P0 613 aa4.06□□□□□ -1.76
CDC42BPA-212ENST00000478573 RRNAD1Q96FB5 475 aaKnown RBP4.06□□□□□ -1.76
CDC42BPA-212ENST00000478573 ELMOD3Q96FG2 381 aa4.06□□□□□ -1.76
CDC42BPA-212ENST00000478573 ZNF570Q96NI8 536 aa4.06□□□□□ -1.76
CDC42BPA-212ENST00000478573 FIZ1Q96SL8 496 aa4.06□□□□□ -1.76
CDC42BPA-212ENST00000478573 C1QTNF1Q9BXJ1 281 aa4.06□□□□□ -1.76
CDC42BPA-212ENST00000478573 PDE7BQ9NP56 450 aa4.06□□□□□ -1.76
CDC42BPA-212ENST00000478573 GIMAP4Q9NUV9 329 aa4.06□□□□□ -1.76
CDC42BPA-212ENST00000478573 CISD1Q9NZ45 108 aaKnown RBP4.06□□□□□ -1.76
CDC42BPA-212ENST00000478573 CHORDC1Q9UHD1 332 aaPredicted RBP4.06□□□□□ -1.76
CDC42BPA-212ENST00000478573 ERRFI1Q9UJM3 462 aaPredicted RBP4.06□□□□□ -1.76
CDC42BPA-212ENST00000478573 SRPRBQ9Y5M8 271 aaKnown RBP4.06□□□□□ -1.76
CDC42BPA-212ENST00000478573 DISP2A7MBM2 1401 aa4.05□□□□□ -1.76
CDC42BPA-212ENST00000478573 CASZ1Q86V15 1759 aa4.05□□□□□ -1.76
CDC42BPA-212ENST00000478573 ACEP12821 1306 aa4.05□□□□□ -1.76
CDC42BPA-212ENST00000478573 TTC21AQ8NDW8 1320 aa4.05□□□□□ -1.76
CDC42BPA-212ENST00000478573 TOGARAM1Q9Y4F4 1720 aa4.05□□□□□ -1.76
CDC42BPA-212ENST00000478573 PLSCR5A0PG75 271 aa4.05□□□□□ -1.76
CDC42BPA-212ENST00000478573 SYNDIG1LA6NDD5 238 aa4.05□□□□□ -1.76
CDC42BPA-212ENST00000478573 MS4A18H0YCH9 400 aa4.05□□□□□ -1.76
CDC42BPA-212ENST00000478573 SH2B2O14492 632 aaPredicted RBP4.05□□□□□ -1.76
CDC42BPA-212ENST00000478573 TCERG1O14776 1098 aaKnown RBP4.05□□□□□ -1.76
CDC42BPA-212ENST00000478573 JRKO75564 520 aa4.05□□□□□ -1.76
CDC42BPA-212ENST00000478573 DDNO94850 711 aaPredicted RBP4.05□□□□□ -1.76
CDC42BPA-212ENST00000478573 ZBTB11O95625 1053 aaPredicted RBP4.05□□□□□ -1.76
CDC42BPA-212ENST00000478573 GLUD1P00367 558 aa4.05□□□□□ -1.76
CDC42BPA-212ENST00000478573 FCGR1AP12314 374 aa4.05□□□□□ -1.76
CDC42BPA-212ENST00000478573 SELLP14151 372 aa4.05□□□□□ -1.76
CDC42BPA-212ENST00000478573 MAOAP21397 527 aa4.05□□□□□ -1.76
CDC42BPA-212ENST00000478573 PON1P27169 355 aa4.05□□□□□ -1.76
CDC42BPA-212ENST00000478573 ACADLP28330 430 aa4.05□□□□□ -1.76
CDC42BPA-212ENST00000478573 KRT20P35900 424 aa4.05□□□□□ -1.76
CDC42BPA-212ENST00000478573 GLUD2P49448 558 aa4.05□□□□□ -1.76
CDC42BPA-212ENST00000478573 CLCN3P51790 818 aa4.05□□□□□ -1.76
CDC42BPA-212ENST00000478573 MRPL12P52815 198 aaKnown RBP4.05□□□□□ -1.76
CDC42BPA-212ENST00000478573 TAS2R40P59535 323 aa4.05□□□□□ -1.76
CDC42BPA-212ENST00000478573 MRPS34P82930 218 aaKnown RBP4.05□□□□□ -1.76
CDC42BPA-212ENST00000478573 SORDQ00796 357 aa4.05□□□□□ -1.76
CDC42BPA-212ENST00000478573 CALD1Q05682 793 aaKnown RBP4.05□□□□□ -1.76
CDC42BPA-212ENST00000478573 COASYQ13057 564 aa4.05□□□□□ -1.76
CDC42BPA-212ENST00000478573 PCLAFQ15004 111 aa4.05□□□□□ -1.76
CDC42BPA-212ENST00000478573 NAB2Q15742 525 aa4.05□□□□□ -1.76
CDC42BPA-212ENST00000478573 NTRK2Q16620 822 aa4.05□□□□□ -1.76
CDC42BPA-212ENST00000478573 ZSCAN23Q3MJ62 389 aa4.05□□□□□ -1.76
CDC42BPA-212ENST00000478573 FAM76BQ5HYJ3 339 aa4.05□□□□□ -1.76
CDC42BPA-212ENST00000478573 C9orf57Q5W0N0 161 aa4.05□□□□□ -1.76
CDC42BPA-212ENST00000478573 SLC30A6Q6NXT4 461 aa4.05□□□□□ -1.76
CDC42BPA-212ENST00000478573 METTL2BQ6P1Q9 378 aaKnown RBP4.05□□□□□ -1.76
CDC42BPA-212ENST00000478573 TMCO3Q6UWJ1 677 aa4.05□□□□□ -1.76
CDC42BPA-212ENST00000478573 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.05□□□□□ -1.763e-11■■■■□ 19.8
CDC42BPA-212ENST00000478573 Q6ZSV7 163 aa4.05□□□□□ -1.76
CDC42BPA-212ENST00000478573 DPPA4Q7L190 304 aa4.05□□□□□ -1.76
CDC42BPA-212ENST00000478573 MON1BQ7L1V2 547 aa4.05□□□□□ -1.76
CDC42BPA-212ENST00000478573 C16orf82Q7Z2V1 217 aa4.05□□□□□ -1.76
CDC42BPA-212ENST00000478573 SCML4Q8N228 414 aa4.05□□□□□ -1.76
CDC42BPA-212ENST00000478573 OR14L1PQ8NHC6 308 aa4.05□□□□□ -1.76
CDC42BPA-212ENST00000478573 TRPC4APQ8TEL6 797 aa4.05□□□□□ -1.76
CDC42BPA-212ENST00000478573 ZKSCAN4Q969J2 545 aaPredicted RBP4.05□□□□□ -1.76
CDC42BPA-212ENST00000478573 ERGIC1Q969X5 290 aa4.05□□□□□ -1.76
CDC42BPA-212ENST00000478573 SLC22A18Q96BI1 424 aa4.05□□□□□ -1.76
CDC42BPA-212ENST00000478573 SAT2Q96F10 170 aaPredicted RBP4.05□□□□□ -1.76
CDC42BPA-212ENST00000478573 METTL2AQ96IZ6 378 aaKnown RBP4.05□□□□□ -1.76
CDC42BPA-212ENST00000478573 APOLD1Q96LR9 279 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms