RNA–Protein interactions for RNA: ENST00000478232.1

RCC1-211, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 2

Gene RCC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-211ENST00000478232 PCDHGA4Q9Y5G9 962 aa13.55□□□□□ -0.24
RCC1-211ENST00000478232 DUSP10Q9Y6W6 482 aa13.55□□□□□ -0.24
RCC1-211ENST00000478232 CFAP46Q8IYW2 2715 aa13.54□□□□□ -0.24
RCC1-211ENST00000478232 GLYATL1P3A0A0U1RQE8 302 aa13.54□□□□□ -0.24
RCC1-211ENST00000478232 C5orf60A6NFR6 353 aa13.54□□□□□ -0.24
RCC1-211ENST00000478232 F5H423 210 aaPredicted RBP13.54□□□□□ -0.24
RCC1-211ENST00000478232 STX7O15400 261 aaKnown RBP13.54□□□□□ -0.24
RCC1-211ENST00000478232 TOX3O15405 576 aaPredicted RBP13.54□□□□□ -0.24
RCC1-211ENST00000478232 ZNF189O75820 626 aaPredicted RBP13.54□□□□□ -0.24
RCC1-211ENST00000478232 STK10O94804 968 aaKnown RBP13.54□□□□□ -0.24
RCC1-211ENST00000478232 UBXN7O94888 489 aa13.54□□□□□ -0.24
RCC1-211ENST00000478232 TJP3O95049 919 aa13.54□□□□□ -0.24
RCC1-211ENST00000478232 AGTP01019 485 aa13.54□□□□□ -0.24
RCC1-211ENST00000478232 AMD1P17707 334 aa13.54□□□□□ -0.24
RCC1-211ENST00000478232 CTNNA2P26232 953 aa13.54□□□□□ -0.24
RCC1-211ENST00000478232 OTUD4Q01804 1114 aaKnown RBP13.54□□□□□ -0.24
RCC1-211ENST00000478232 ITGA9Q13797 1035 aa13.54□□□□□ -0.24
RCC1-211ENST00000478232 PRPSAP1Q14558 356 aa13.54□□□□□ -0.24
RCC1-211ENST00000478232 PLA2G4EQ3MJ16 856 aa13.54□□□□□ -0.24
RCC1-211ENST00000478232 ANKS6Q68DC2 871 aa13.54□□□□□ -0.24
RCC1-211ENST00000478232 FAM151BQ6UXP7 276 aa13.54□□□□□ -0.24
RCC1-211ENST00000478232 CEACAM20Q6UY09 585 aa13.54□□□□□ -0.24
RCC1-211ENST00000478232 RANBP10Q6VN20 620 aa13.54□□□□□ -0.24
RCC1-211ENST00000478232 C11orf96Q7Z7L8 435 aa13.54□□□□□ -0.24
RCC1-211ENST00000478232 AMZ2Q86W34 360 aa13.54□□□□□ -0.24
RCC1-211ENST00000478232 TRAPPC5Q8IUR0 188 aa13.54□□□□□ -0.24
RCC1-211ENST00000478232 CDKL3Q8IVW4 592 aaPredicted RBP13.54□□□□□ -0.24
RCC1-211ENST00000478232 IL22RA1Q8N6P7 574 aa13.54□□□□□ -0.24
RCC1-211ENST00000478232 RASGEF1AQ8N9B8 481 aa13.54□□□□□ -0.24
RCC1-211ENST00000478232 ZNF398Q8TD17 642 aa13.54□□□□□ -0.24
RCC1-211ENST00000478232 JPH3Q8WXH2 748 aaPredicted RBP13.54□□□□□ -0.24
RCC1-211ENST00000478232 PMEPA1Q969W9 287 aa13.54□□□□□ -0.24
RCC1-211ENST00000478232 PPP1R2P1Q96PQ5 205 aa13.54□□□□□ -0.24
RCC1-211ENST00000478232 SPRY4Q9C004 299 aa13.54□□□□□ -0.24
RCC1-211ENST00000478232 GBA3Q9H227 469 aa13.54□□□□□ -0.24
RCC1-211ENST00000478232 C10orf88Q9H8K7 445 aa13.54□□□□□ -0.24
RCC1-211ENST00000478232 SLC40A1Q9NP59 571 aa13.54□□□□□ -0.24
RCC1-211ENST00000478232 POT1Q9NUX5 634 aa13.54□□□□□ -0.24
RCC1-211ENST00000478232 GCN1Q92616 2671 aaKnown RBP13.54□□□□□ -0.24
RCC1-211ENST00000478232 ATMQ13315 3056 aa13.53□□□□□ -0.24
RCC1-211ENST00000478232 C2orf81A6NN90 581 aa13.53□□□□□ -0.24
RCC1-211ENST00000478232 B8ZZF3 427 aa13.53□□□□□ -0.24
RCC1-211ENST00000478232 CAPN5O15484 640 aaPredicted RBP13.53□□□□□ -0.24
RCC1-211ENST00000478232 PJA2O43164 708 aa13.53□□□□□ -0.24
RCC1-211ENST00000478232 BUD23O43709 281 aaKnown RBP13.53□□□□□ -0.24
RCC1-211ENST00000478232 POP7O75817 140 aaKnown RBP13.53□□□□□ -0.24
RCC1-211ENST00000478232 C9P02748 559 aa13.53□□□□□ -0.24
RCC1-211ENST00000478232 ANKRD34CP0C6C1 535 aa13.53□□□□□ -0.24
RCC1-211ENST00000478232 RBP3P10745 1247 aa13.53□□□□□ -0.24
RCC1-211ENST00000478232 SFTPCP11686 197 aa13.53□□□□□ -0.24
RCC1-211ENST00000478232 BRAFP15056 766 aa13.53□□□□□ -0.24
RCC1-211ENST00000478232 LPOP22079 712 aaPredicted RBP13.53□□□□□ -0.24
RCC1-211ENST00000478232 RPL10P27635 214 aaKnown RBP13.53□□□□□ -0.24
RCC1-211ENST00000478232 MAP4P27816 1152 aaKnown RBP13.53□□□□□ -0.24
RCC1-211ENST00000478232 HALP42357 657 aa13.53□□□□□ -0.24
RCC1-211ENST00000478232 EIF3EP60228 445 aaKnown RBP13.53□□□□□ -0.24
RCC1-211ENST00000478232 DMPKQ09013 629 aa13.53□□□□□ -0.24
RCC1-211ENST00000478232 TAF1AQ15573 450 aaPredicted RBP13.53□□□□□ -0.24
RCC1-211ENST00000478232 SEPT7Q16181 437 aaKnown RBP13.53□□□□□ -0.24
RCC1-211ENST00000478232 LINC00303Q3SY05 128 aa13.53□□□□□ -0.24
RCC1-211ENST00000478232 ANKRD20A2Q5SQ80 823 aa13.53□□□□□ -0.24
RCC1-211ENST00000478232 ANKRD20A1Q5TYW2 823 aa13.53□□□□□ -0.24
RCC1-211ENST00000478232 ANKRD20A3Q5VUR7 823 aa13.53□□□□□ -0.24
RCC1-211ENST00000478232 DARS2Q6PI48 645 aaKnown RBP13.53□□□□□ -0.24
RCC1-211ENST00000478232 CACNA2D3Q8IZS8 1091 aa13.53□□□□□ -0.24
RCC1-211ENST00000478232 DDHD1Q8NEL9 900 aa13.53□□□□□ -0.24
RCC1-211ENST00000478232 CXorf40BQ96DE9 158 aa13.53□□□□□ -0.24
RCC1-211ENST00000478232 RTP4Q96DX8 246 aa13.53□□□□□ -0.24
RCC1-211ENST00000478232 ZNF514Q96K75 400 aaPredicted RBP13.53□□□□□ -0.24
RCC1-211ENST00000478232 C9orf72Q96LT7 481 aa13.53□□□□□ -0.24
RCC1-211ENST00000478232 ARHGAP9Q9BRR9 750 aa13.53□□□□□ -0.24
RCC1-211ENST00000478232 SEMA4CQ9C0C4 833 aa13.53□□□□□ -0.24
RCC1-211ENST00000478232 LACRTQ9GZZ8 138 aa13.53□□□□□ -0.24
RCC1-211ENST00000478232 KLHL3Q9UH77 587 aa13.53□□□□□ -0.24
RCC1-211ENST00000478232 PILRAQ9UKJ1 303 aa13.53□□□□□ -0.24
RCC1-211ENST00000478232 REXO2Q9Y3B8 237 aaKnown RBP13.53□□□□□ -0.24
RCC1-211ENST00000478232 SLC30A1Q9Y6M5 507 aa13.53□□□□□ -0.24
RCC1-211ENST00000478232 KLHL33A6NCF5 533 aa13.52□□□□□ -0.25
RCC1-211ENST00000478232 POLR1CO15160 346 aaPredicted RBP13.52□□□□□ -0.25
RCC1-211ENST00000478232 KCNN4O15554 427 aa13.52□□□□□ -0.25
RCC1-211ENST00000478232 RAD1O60671 282 aa13.52□□□□□ -0.25
RCC1-211ENST00000478232 PYGMP11217 842 aa13.52□□□□□ -0.25
RCC1-211ENST00000478232 TYRP1P17643 537 aa13.52□□□□□ -0.25
RCC1-211ENST00000478232 WT1P19544 449 aaPredicted RBP13.52□□□□□ -0.25
RCC1-211ENST00000478232 ADRA1AP35348 466 aa13.52□□□□□ -0.25
RCC1-211ENST00000478232 VAV2P52735 878 aa13.52□□□□□ -0.25
RCC1-211ENST00000478232 DRG2P55039 364 aaKnown RBP13.52□□□□□ -0.25
RCC1-211ENST00000478232 PDE1BQ01064 536 aa13.52□□□□□ -0.25
RCC1-211ENST00000478232 CLCA4Q14CN2 919 aa13.52□□□□□ -0.25
RCC1-211ENST00000478232 LONRF2Q1L5Z9 754 aa13.52□□□□□ -0.25
RCC1-211ENST00000478232 GPRC6AQ5T6X5 926 aa13.52□□□□□ -0.25
RCC1-211ENST00000478232 TMEM220Q6QAJ8 160 aa13.52□□□□□ -0.25
RCC1-211ENST00000478232 RAD9BQ6WBX8 426 aa13.52□□□□□ -0.25
RCC1-211ENST00000478232 TXLNBQ8N3L3 684 aa13.52□□□□□ -0.25
RCC1-211ENST00000478232 EXD3Q8N9H8 876 aa13.52□□□□□ -0.25
RCC1-211ENST00000478232 LRRC57Q8N9N7 239 aa13.52□□□□□ -0.25
RCC1-211ENST00000478232 EXTL1Q92935 676 aa13.52□□□□□ -0.25
RCC1-211ENST00000478232 LRRC45Q96CN5 670 aa13.52□□□□□ -0.25
RCC1-211ENST00000478232 CTRCQ99895 268 aa13.52□□□□□ -0.25
RCC1-211ENST00000478232 C19orf43Q9BQ61 176 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms