RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 DRG2P55039 364 aaKnown RBP15.33■□□□□ 0.04
HMGA1-206ENST00000478214 HHEXQ03014 270 aa15.33■□□□□ 0.04
HMGA1-206ENST00000478214 KIR2DS5Q14953 304 aa15.33■□□□□ 0.04
HMGA1-206ENST00000478214 GPR33Q49SQ1 333 aa15.33■□□□□ 0.04
HMGA1-206ENST00000478214 NKAIN2Q5VXU1 208 aa15.33■□□□□ 0.04
HMGA1-206ENST00000478214 FAM83HQ6ZRV2 1179 aaPredicted RBP15.33■□□□□ 0.04
HMGA1-206ENST00000478214 USP53Q70EK8 1073 aa15.33■□□□□ 0.04
HMGA1-206ENST00000478214 TAS2R42Q7RTR8 314 aa15.33■□□□□ 0.04
HMGA1-206ENST00000478214 AMZ2Q86W34 360 aa15.33■□□□□ 0.04
HMGA1-206ENST00000478214 SERPINA9Q86WD7 417 aa15.33■□□□□ 0.04
HMGA1-206ENST00000478214 PIANPQ8IYJ0 282 aa15.33■□□□□ 0.04
HMGA1-206ENST00000478214 GRAMD1AQ96CP6 724 aa15.33■□□□□ 0.04
HMGA1-206ENST00000478214 DCUN1D1Q96GG9 259 aa15.33■□□□□ 0.04
HMGA1-206ENST00000478214 ZNF778Q96MU6 729 aa15.33■□□□□ 0.04
HMGA1-206ENST00000478214 RANBP9Q96S59 729 aa15.33■□□□□ 0.04
HMGA1-206ENST00000478214 COPS8Q99627 209 aa15.33■□□□□ 0.04
HMGA1-206ENST00000478214 NUDT22Q9BRQ3 303 aa15.33■□□□□ 0.04
HMGA1-206ENST00000478214 RDH14Q9HBH5 336 aa15.33■□□□□ 0.04
HMGA1-206ENST00000478214 SARS2Q9NP81 518 aaKnown RBP15.33■□□□□ 0.04
HMGA1-206ENST00000478214 KCNK4Q9NYG8 393 aa15.33■□□□□ 0.04
HMGA1-206ENST00000478214 SLC2A6Q9UGQ3 507 aa15.33■□□□□ 0.04
HMGA1-206ENST00000478214 ACACAQ13085 2346 aa15.32■□□□□ 0.04
HMGA1-206ENST00000478214 IGHV1OR21-1A0A087WYE8 117 aa15.32■□□□□ 0.04
HMGA1-206ENST00000478214 TRBV5-4A0A0C4DH59 114 aa15.32■□□□□ 0.04
HMGA1-206ENST00000478214 TCRBV7S3A2A0A539 114 aa15.32■□□□□ 0.04
HMGA1-206ENST00000478214 HEATR9A2RTY3 570 aa15.32■□□□□ 0.04
HMGA1-206ENST00000478214 CCDC162PA2VCL2 907 aa15.32■□□□□ 0.04
HMGA1-206ENST00000478214 PMS2P1A4D2B8 440 aa15.32■□□□□ 0.04
HMGA1-206ENST00000478214 BRINP1O60477 761 aa15.32■□□□□ 0.04
HMGA1-206ENST00000478214 KRT14P02533 472 aa15.32■□□□□ 0.04
HMGA1-206ENST00000478214 BRAFP15056 766 aa15.32■□□□□ 0.04
HMGA1-206ENST00000478214 VCLP18206 1134 aa15.32■□□□□ 0.04
HMGA1-206ENST00000478214 IDSP22304 550 aa15.32■□□□□ 0.04
HMGA1-206ENST00000478214 CD1CP29017 333 aa15.32■□□□□ 0.04
HMGA1-206ENST00000478214 PBLDP30039 288 aaPredicted RBP15.32■□□□□ 0.04
HMGA1-206ENST00000478214 INHBCP55103 352 aa15.32■□□□□ 0.04
HMGA1-206ENST00000478214 SESN2P58004 480 aaPredicted RBP15.32■□□□□ 0.04
HMGA1-206ENST00000478214 UBE2IP63279 158 aaKnown RBP15.32■□□□□ 0.04
HMGA1-206ENST00000478214 GABREP78334 506 aa15.32■□□□□ 0.04
HMGA1-206ENST00000478214 CCDC173Q0VFZ6 552 aa15.32■□□□□ 0.04
HMGA1-206ENST00000478214 GPS1Q13098 491 aa15.32■□□□□ 0.04
HMGA1-206ENST00000478214 MAP9Q49MG5 647 aa15.32■□□□□ 0.04
HMGA1-206ENST00000478214 C3orf38Q5JPI3 329 aa15.32■□□□□ 0.04
HMGA1-206ENST00000478214 TSTD2Q5T7W7 516 aa15.32■□□□□ 0.04
HMGA1-206ENST00000478214 CCDC137Q6PK04 289 aaKnown RBP15.32■□□□□ 0.04
HMGA1-206ENST00000478214 ABRAXAS1Q6UWZ7 409 aa15.32■□□□□ 0.04
HMGA1-206ENST00000478214 SLC9B2Q86UD5 537 aa15.32■□□□□ 0.04
HMGA1-206ENST00000478214 OR13J1Q8NGT2 312 aa15.32■□□□□ 0.04
HMGA1-206ENST00000478214 ZNF514Q96K75 400 aaPredicted RBP15.32■□□□□ 0.04
HMGA1-206ENST00000478214 SLC38A3Q99624 504 aa15.32■□□□□ 0.04
HMGA1-206ENST00000478214 POLR1BQ9H9Y6 1135 aa15.32■□□□□ 0.04
HMGA1-206ENST00000478214 EPB41L5Q9HCM4 733 aa15.32■□□□□ 0.04
HMGA1-206ENST00000478214 ZDHHC3Q9NYG2 299 aa15.32■□□□□ 0.04
HMGA1-206ENST00000478214 CPNE7Q9UBL6 633 aa15.32■□□□□ 0.04
HMGA1-206ENST00000478214 SATB2Q9UPW6 733 aa15.32■□□□□ 0.04
HMGA1-206ENST00000478214 RAXQ9Y2V3 346 aa15.32■□□□□ 0.04
HMGA1-206ENST00000478214 TCAF1Q9Y4C2 921 aa15.32■□□□□ 0.04
HMGA1-206ENST00000478214 DNMT3AQ9Y6K1 912 aaPredicted RBP15.32■□□□□ 0.04
HMGA1-206ENST00000478214 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.32■□□□□ 0.047e-259■■■■■ 89.1
HMGA1-206ENST00000478214 ANKRD11Q6UB99 2663 aaPredicted RBP15.32■□□□□ 0.04
HMGA1-206ENST00000478214 LAMA5O15230 3695 aa15.32■□□□□ 0.04
HMGA1-206ENST00000478214 UNC13CQ8NB66 2214 aa15.32■□□□□ 0.04
HMGA1-206ENST00000478214 CELSR3Q9NYQ7 3312 aa15.32■□□□□ 0.04
HMGA1-206ENST00000478214 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.31■□□□□ 0.04
HMGA1-206ENST00000478214 IGLV3-16A0A075B6K0 115 aa15.31■□□□□ 0.04
HMGA1-206ENST00000478214 SRRM3A6NNA2 597 aaPredicted RBP15.31■□□□□ 0.04
HMGA1-206ENST00000478214 CFAP99D6REC4 459 aa15.31■□□□□ 0.04
HMGA1-206ENST00000478214 ZW10O43264 779 aa15.31■□□□□ 0.04
HMGA1-206ENST00000478214 KCNJ13O60928 360 aa15.31■□□□□ 0.04
HMGA1-206ENST00000478214 PHF2O75151 1096 aa15.31■□□□□ 0.04
HMGA1-206ENST00000478214 CPNE6O95741 557 aa15.31■□□□□ 0.04
HMGA1-206ENST00000478214 RALBP11234 206 aa15.31■□□□□ 0.04
HMGA1-206ENST00000478214 TCP1P17987 556 aaKnown RBP15.31■□□□□ 0.04
HMGA1-206ENST00000478214 XRCC1P18887 633 aaPredicted RBP15.31■□□□□ 0.04
HMGA1-206ENST00000478214 TPSB2P20231 275 aa15.31■□□□□ 0.04
HMGA1-206ENST00000478214 ACRV1P26436 265 aa15.31■□□□□ 0.04
HMGA1-206ENST00000478214 SLC19A1P41440 591 aa15.31■□□□□ 0.04
HMGA1-206ENST00000478214 LSSP48449 732 aa15.31■□□□□ 0.04
HMGA1-206ENST00000478214 CRADDP78560 199 aa15.31■□□□□ 0.04
HMGA1-206ENST00000478214 CACNG1Q06432 222 aa15.31■□□□□ 0.04
HMGA1-206ENST00000478214 ZFP36L1Q07352 338 aaKnown RBP15.31■□□□□ 0.04
HMGA1-206ENST00000478214 DMPKQ09013 629 aa15.31■□□□□ 0.04
HMGA1-206ENST00000478214 LAMB3Q13751 1172 aa15.31■□□□□ 0.04
HMGA1-206ENST00000478214 NFE2L1Q14494 772 aa15.31■□□□□ 0.04
HMGA1-206ENST00000478214 TPSAB1Q15661 275 aa15.31■□□□□ 0.04
HMGA1-206ENST00000478214 DBN1Q16643 649 aa15.31■□□□□ 0.04
HMGA1-206ENST00000478214 BCL7AQ4VC05 210 aa15.31■□□□□ 0.04
HMGA1-206ENST00000478214 AGAP9Q5VTM2 703 aa15.31■□□□□ 0.04
HMGA1-206ENST00000478214 WASH2PQ6VEQ5 465 aa15.31■□□□□ 0.04
HMGA1-206ENST00000478214 PIM3Q86V86 326 aa15.31■□□□□ 0.04
HMGA1-206ENST00000478214 SLITRK4Q8IW52 837 aa15.31■□□□□ 0.04
HMGA1-206ENST00000478214 HDAC10Q969S8 669 aa15.31■□□□□ 0.04
HMGA1-206ENST00000478214 TMEM74Q96NL1 305 aa15.31■□□□□ 0.04
HMGA1-206ENST00000478214 SEMA6CQ9H3T2 930 aa15.31■□□□□ 0.04
HMGA1-206ENST00000478214 STN1Q9H668 368 aaKnown RBP15.31■□□□□ 0.04
HMGA1-206ENST00000478214 WASH6PQ9NQA3 447 aa15.31■□□□□ 0.04
HMGA1-206ENST00000478214 ZNF624Q9P2J8 865 aaPredicted RBP15.31■□□□□ 0.04
HMGA1-206ENST00000478214 RIMKLBQ9ULI2 386 aa15.31■□□□□ 0.04
HMGA1-206ENST00000478214 WDR37Q9Y2I8 494 aa15.31■□□□□ 0.04
HMGA1-206ENST00000478214 NEU2Q9Y3R4 380 aa15.31■□□□□ 0.04
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