RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 GJB7Q6PEY0 223 aa4.78□□□□□ -1.64
VPS50-214ENST00000477935 C19orf48Q6RUI8 117 aa4.78□□□□□ -1.64
VPS50-214ENST00000477935 Q6ZSV7 163 aa4.78□□□□□ -1.64
VPS50-214ENST00000477935 MEPCEQ7L2J0 689 aaKnown RBP4.78□□□□□ -1.64
VPS50-214ENST00000477935 LONP2Q86WA8 852 aa4.78□□□□□ -1.64
VPS50-214ENST00000477935 LRRC43Q8N309 656 aa4.78□□□□□ -1.64
VPS50-214ENST00000477935 PRR26Q8N8Z3 221 aa4.78□□□□□ -1.64
VPS50-214ENST00000477935 SETD9Q8NE22 299 aa4.78□□□□□ -1.64
VPS50-214ENST00000477935 RNFT2Q96EX2 444 aa4.78□□□□□ -1.64
VPS50-214ENST00000477935 THOC3Q96J01 351 aaKnown RBP4.78□□□□□ -1.64
VPS50-214ENST00000477935 APOLD1Q96LR9 279 aa4.78□□□□□ -1.64
VPS50-214ENST00000477935 COG8Q96MW5 612 aa4.78□□□□□ -1.64
VPS50-214ENST00000477935 TAAR1Q96RJ0 339 aa4.78□□□□□ -1.64
VPS50-214ENST00000477935 ZPBPQ9BS86 351 aa4.78□□□□□ -1.64
VPS50-214ENST00000477935 NTPCRQ9BSD7 190 aaKnown RBP4.78□□□□□ -1.64
VPS50-214ENST00000477935 HERPUD2Q9BSE4 406 aa4.78□□□□□ -1.64
VPS50-214ENST00000477935 PRKRIP1Q9H875 184 aaPredicted RBP4.78□□□□□ -1.64
VPS50-214ENST00000477935 NOD2Q9HC29 1040 aa4.78□□□□□ -1.64
VPS50-214ENST00000477935 HIF1ANQ9NWT6 349 aa4.78□□□□□ -1.64
VPS50-214ENST00000477935 MAP3K20Q9NYL2 800 aaKnown RBP4.78□□□□□ -1.64
VPS50-214ENST00000477935 SEL1LQ9UBV2 794 aa4.78□□□□□ -1.64
VPS50-214ENST00000477935 STX8Q9UNK0 236 aa4.78□□□□□ -1.64
VPS50-214ENST00000477935 MTF2Q9Y483 593 aaPredicted RBP4.78□□□□□ -1.64
VPS50-214ENST00000477935 PTGDR2Q9Y5Y4 395 aa4.78□□□□□ -1.64
VPS50-214ENST00000477935 KALRNO60229 2985 aa4.78□□□□□ -1.64
VPS50-214ENST00000477935 CCDC171Q6TFL3 1326 aa4.77□□□□□ -1.65
VPS50-214ENST00000477935 IGSF9BQ9UPX0 1349 aa4.77□□□□□ -1.65
VPS50-214ENST00000477935 KDM3AQ9Y4C1 1321 aa4.77□□□□□ -1.65
VPS50-214ENST00000477935 FREM2Q5SZK8 3169 aa4.77□□□□□ -1.65
VPS50-214ENST00000477935 A0A1B0GVT2 93 aa4.77□□□□□ -1.65
VPS50-214ENST00000477935 MBLAC1A4D2B0 266 aaPredicted RBP4.77□□□□□ -1.65
VPS50-214ENST00000477935 RRN3P2A6NIE6 340 aa4.77□□□□□ -1.65
VPS50-214ENST00000477935 OR6C75A6NL08 312 aa4.77□□□□□ -1.65
VPS50-214ENST00000477935 LACTBL1A8MY62 500 aa4.77□□□□□ -1.65
VPS50-214ENST00000477935 SPRY3O43610 288 aa4.77□□□□□ -1.65
VPS50-214ENST00000477935 DHX16O60231 1041 aaKnown RBP4.77□□□□□ -1.65
VPS50-214ENST00000477935 T-ENOLP0DO92 83 aa4.77□□□□□ -1.65
VPS50-214ENST00000477935 HOXA6P31267 233 aa4.77□□□□□ -1.65
VPS50-214ENST00000477935 RFC1P35251 1148 aaPredicted RBP4.77□□□□□ -1.65
VPS50-214ENST00000477935 HNF1BP35680 557 aa4.77□□□□□ -1.65
VPS50-214ENST00000477935 MLH1P40692 756 aa4.77□□□□□ -1.65
VPS50-214ENST00000477935 PAPOLAP51003 745 aaKnown RBP4.77□□□□□ -1.65
VPS50-214ENST00000477935 TFAP4Q01664 338 aa4.77□□□□□ -1.65
VPS50-214ENST00000477935 GOLGA8FQ08AF8 430 aa4.77□□□□□ -1.65
VPS50-214ENST00000477935 SF3A2Q15428 464 aaKnown RBP4.77□□□□□ -1.65
VPS50-214ENST00000477935 DNTTIP2Q5QJE6 756 aaKnown RBP4.77□□□□□ -1.65
VPS50-214ENST00000477935 METTL7BQ6UX53 244 aa4.77□□□□□ -1.65
VPS50-214ENST00000477935 MTSS1LQ765P7 747 aa4.77□□□□□ -1.65
VPS50-214ENST00000477935 TRILQ7L0X0 811 aa4.77□□□□□ -1.65
VPS50-214ENST00000477935 BHLHA9Q7RTU4 235 aa4.77□□□□□ -1.65
VPS50-214ENST00000477935 SLC39A11Q8N1S5 342 aa4.77□□□□□ -1.65
VPS50-214ENST00000477935 DNAJB3Q8WWF6 145 aa4.77□□□□□ -1.65
VPS50-214ENST00000477935 DCLK3Q9C098 648 aa4.77□□□□□ -1.65
VPS50-214ENST00000477935 ARRDC1-AS1Q9H2J1 176 aa4.77□□□□□ -1.65
VPS50-214ENST00000477935 CXorf56Q9H5V9 222 aa4.77□□□□□ -1.65
VPS50-214ENST00000477935 NLKQ9UBE8 527 aa4.77□□□□□ -1.65
VPS50-214ENST00000477935 TUBE1Q9UJT0 475 aa4.77□□□□□ -1.65
VPS50-214ENST00000477935 FZD10Q9ULW2 581 aa4.77□□□□□ -1.65
VPS50-214ENST00000477935 MYO6Q9UM54 1294 aa4.77□□□□□ -1.65
VPS50-214ENST00000477935 GDAQ9Y2T3 454 aa4.77□□□□□ -1.65
VPS50-214ENST00000477935 TRPV2Q9Y5S1 764 aa4.77□□□□□ -1.65
VPS50-214ENST00000477935 NAV1Q8NEY1 1877 aa4.77□□□□□ -1.65
VPS50-214ENST00000477935 PLIN4Q96Q06 1357 aa4.77□□□□□ -1.65
VPS50-214ENST00000477935 ACACAQ13085 2346 aa4.77□□□□□ -1.65
VPS50-214ENST00000477935 TENM4Q6N022 2769 aa4.76□□□□□ -1.65
VPS50-214ENST00000477935 CLUHO75153 1309 aa4.76□□□□□ -1.65
VPS50-214ENST00000477935 MYO9AB2RTY4 2548 aa4.76□□□□□ -1.65
VPS50-214ENST00000477935 MS4A18H0YCH9 400 aa4.76□□□□□ -1.65
VPS50-214ENST00000477935 ANP32CO43423 234 aa4.76□□□□□ -1.65
VPS50-214ENST00000477935 RPS6KA5O75582 802 aa4.76□□□□□ -1.65
VPS50-214ENST00000477935 PRDM1O75626 825 aa4.76□□□□□ -1.65
VPS50-214ENST00000477935 STAM2O75886 525 aa4.76□□□□□ -1.65
VPS50-214ENST00000477935 PAPSS2O95340 614 aaPredicted RBP4.76□□□□□ -1.65
VPS50-214ENST00000477935 CLDN7O95471 211 aa4.76□□□□□ -1.65
VPS50-214ENST00000477935 UBA1P22314 1058 aaKnown RBP4.76□□□□□ -1.65
VPS50-214ENST00000477935 GNLYP22749 145 aa4.76□□□□□ -1.65
VPS50-214ENST00000477935 HOXD3P31249 432 aaPredicted RBP4.76□□□□□ -1.65
VPS50-214ENST00000477935 CCKBRP32239 447 aa4.76□□□□□ -1.65
VPS50-214ENST00000477935 NOVP48745 357 aa4.76□□□□□ -1.65
VPS50-214ENST00000477935 CLCN4P51793 760 aa4.76□□□□□ -1.65
VPS50-214ENST00000477935 PMS2P54278 862 aa4.76□□□□□ -1.65
VPS50-214ENST00000477935 CDH12P55289 794 aa4.76□□□□□ -1.65
VPS50-214ENST00000477935 ABATP80404 500 aa4.76□□□□□ -1.65
VPS50-214ENST00000477935 Q0VFX4 171 aa4.76□□□□□ -1.65
VPS50-214ENST00000477935 PPFIA1Q13136 1202 aa4.76□□□□□ -1.65
VPS50-214ENST00000477935 SPTAN1Q13813 2472 aaKnown RBP4.76□□□□□ -1.65
VPS50-214ENST00000477935 RPE65Q16518 533 aa4.76□□□□□ -1.65
VPS50-214ENST00000477935 CCDC96Q2M329 555 aa4.76□□□□□ -1.65
VPS50-214ENST00000477935 FNBP1LQ5T0N5 605 aa4.76□□□□□ -1.65
VPS50-214ENST00000477935 UBAP2Q5T6F2 1119 aaKnown RBP4.76□□□□□ -1.65
VPS50-214ENST00000477935 ZNF367Q7RTV3 350 aa4.76□□□□□ -1.65
VPS50-214ENST00000477935 CACNA2D4Q7Z3S7 1137 aa4.76□□□□□ -1.65
VPS50-214ENST00000477935 ERC1Q8IUD2 1116 aa4.76□□□□□ -1.65
VPS50-214ENST00000477935 SLC35F5Q8WV83 523 aa4.76□□□□□ -1.65
VPS50-214ENST00000477935 ARHGAP45Q92619 1136 aa4.76□□□□□ -1.65
VPS50-214ENST00000477935 CASD1Q96PB1 797 aa4.76□□□□□ -1.65
VPS50-214ENST00000477935 PYM1Q9BRP8 204 aaKnown RBP4.76□□□□□ -1.65
VPS50-214ENST00000477935 NPLQ9BXD5 320 aaPredicted RBP4.76□□□□□ -1.65
VPS50-214ENST00000477935 MRPL9Q9BYD2 267 aaKnown RBP4.76□□□□□ -1.65
VPS50-214ENST00000477935 ZBP1Q9H171 429 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms